RNA–Protein interactions for RNA: ENST00000475367.1

SPTAN1-206, Transcript of spectrin alpha, non-erythrocytic 1, humanhuman

TSL 2

Gene SPTAN1, Length 2,237 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTAN1-206ENST00000475367 TTC39AQ5SRH9 613 aa11.84□□□□□ -0.51
SPTAN1-206ENST00000475367 RASEFQ8IZ41 740 aa11.84□□□□□ -0.51
SPTAN1-206ENST00000475367 VGLL2Q8N8G2 317 aa11.84□□□□□ -0.51
SPTAN1-206ENST00000475367 KBTBD3Q8NAB2 608 aa11.84□□□□□ -0.51
SPTAN1-206ENST00000475367 PPIL4Q8WUA2 492 aaKnown RBP eCLIP11.84□□□□□ -0.51
SPTAN1-206ENST00000475367 CCDC171Q6TFL3 1326 aa11.84□□□□□ -0.51
SPTAN1-206ENST00000475367 RFX7Q2KHR2 1363 aa11.83□□□□□ -0.52
SPTAN1-206ENST00000475367 CHGBP05060 677 aa11.83□□□□□ -0.52
SPTAN1-206ENST00000475367 FAM196AQ6ZSG2 479 aa11.83□□□□□ -0.52
SPTAN1-206ENST00000475367 KRT27Q7Z3Y8 459 aa11.83□□□□□ -0.52
SPTAN1-206ENST00000475367 ARHGEF1Q92888 912 aaKnown RBP11.83□□□□□ -0.52
SPTAN1-206ENST00000475367 LY75O60449 1722 aa11.83□□□□□ -0.52
SPTAN1-206ENST00000475367 DDX60Q8IY21 1712 aaKnown RBP11.83□□□□□ -0.52
SPTAN1-206ENST00000475367 MED23Q9ULK4 1368 aa11.83□□□□□ -0.52
SPTAN1-206ENST00000475367 PDE8BO95263 885 aa11.83□□□□□ -0.52
SPTAN1-206ENST00000475367 PRPF40BQ6NWY9 871 aaKnown RBP11.83□□□□□ -0.52
SPTAN1-206ENST00000475367 HELBQ8NG08 1087 aaPredicted RBP11.83□□□□□ -0.52
SPTAN1-206ENST00000475367 RTL9Q8NET4 1388 aa11.82□□□□□ -0.52
SPTAN1-206ENST00000475367 MROH5Q6ZUA9 1318 aa11.82□□□□□ -0.52
SPTAN1-206ENST00000475367 ZNF589Q86UQ0 364 aaPredicted RBP11.82□□□□□ -0.52
SPTAN1-206ENST00000475367 MPHOSPH8Q99549 860 aa11.82□□□□□ -0.52
SPTAN1-206ENST00000475367 UPF3BQ9BZI7 483 aaKnown RBP11.82□□□□□ -0.52
SPTAN1-206ENST00000475367 LRRC4BQ9NT99 713 aa11.82□□□□□ -0.52
SPTAN1-206ENST00000475367 RBM8AQ9Y5S9 174 aaKnown RBP11.82□□□□□ -0.52
SPTAN1-206ENST00000475367 SCN7AQ01118 1682 aa11.82□□□□□ -0.52
SPTAN1-206ENST00000475367 FRAT2O75474 233 aaPredicted RBP11.82□□□□□ -0.52
SPTAN1-206ENST00000475367 KCNJ4P48050 445 aa11.82□□□□□ -0.52
SPTAN1-206ENST00000475367 FKBP4Q02790 459 aaKnown RBP eCLIP11.82□□□□□ -0.52
SPTAN1-206ENST00000475367 C3orf67Q6ZVT6 689 aa11.82□□□□□ -0.52
SPTAN1-206ENST00000475367 MAP4K1Q92918 833 aa11.82□□□□□ -0.52
SPTAN1-206ENST00000475367 KCNB2Q92953 911 aa11.82□□□□□ -0.52
SPTAN1-206ENST00000475367 SETDB2Q96T68 719 aa11.82□□□□□ -0.52
SPTAN1-206ENST00000475367 LRP5O75197 1615 aa11.81□□□□□ -0.52
SPTAN1-206ENST00000475367 TAF5LO75529 589 aa11.81□□□□□ -0.52
SPTAN1-206ENST00000475367 PHF14O94880 888 aa11.81□□□□□ -0.52
SPTAN1-206ENST00000475367 GTF2E1P29083 439 aaPredicted RBP11.81□□□□□ -0.52
SPTAN1-206ENST00000475367 SCARF1Q14162 830 aa11.81□□□□□ -0.52
SPTAN1-206ENST00000475367 NECTIN1Q15223 517 aa11.81□□□□□ -0.52
SPTAN1-206ENST00000475367 TRAPPC3LQ5T215 181 aa11.81□□□□□ -0.52
SPTAN1-206ENST00000475367 TAF1LQ8IZX4 1826 aa11.81□□□□□ -0.52
SPTAN1-206ENST00000475367 TRIM37O94972 964 aa11.8□□□□□ -0.52
SPTAN1-206ENST00000475367 IGHMBP2P38935 993 aaKnown RBP11.8□□□□□ -0.52
SPTAN1-206ENST00000475367 MCM2P49736 904 aa11.8□□□□□ -0.52
SPTAN1-206ENST00000475367 PUM3Q15397 648 aaKnown RBP11.8□□□□□ -0.52
SPTAN1-206ENST00000475367 SLFNL1Q499Z3 407 aa11.8□□□□□ -0.52
SPTAN1-206ENST00000475367 MCMDC2Q4G0Z9 681 aa11.8□□□□□ -0.52
SPTAN1-206ENST00000475367 SLC10A5Q5PT55 438 aa11.8□□□□□ -0.52
SPTAN1-206ENST00000475367 CCDC129Q6ZRS4 1044 aa11.8□□□□□ -0.52
SPTAN1-206ENST00000475367 SEC62Q99442 399 aaKnown RBP11.8□□□□□ -0.52
SPTAN1-206ENST00000475367 CIZ1Q9ULV3 898 aaPredicted RBP11.8□□□□□ -0.52
SPTAN1-206ENST00000475367 BRWD3Q6RI45 1802 aa11.8□□□□□ -0.52
SPTAN1-206ENST00000475367 LAMB2P55268 1798 aa11.8□□□□□ -0.52
SPTAN1-206ENST00000475367 C4BP0C0L5 1744 aa11.8□□□□□ -0.52
SPTAN1-206ENST00000475367 RNF113AO15541 343 aaKnown RBP11.8□□□□□ -0.52
SPTAN1-206ENST00000475367 FGFR2P21802 821 aa11.8□□□□□ -0.52
SPTAN1-206ENST00000475367 RFC4P35249 363 aa11.8□□□□□ -0.52
SPTAN1-206ENST00000475367 ZAP70P43403 619 aa11.8□□□□□ -0.52
SPTAN1-206ENST00000475367 SF3B3Q15393 1217 aaKnown RBP11.8□□□□□ -0.52
SPTAN1-206ENST00000475367 CREB3L3Q68CJ9 461 aa11.8□□□□□ -0.52
SPTAN1-206ENST00000475367 NBPF5PQ86XG9 351 aaPredicted RBP11.8□□□□□ -0.52
SPTAN1-206ENST00000475367 TICAM2Q86XR7 235 aa11.8□□□□□ -0.52
SPTAN1-206ENST00000475367 NYXQ9GZU5 481 aa11.8□□□□□ -0.52
SPTAN1-206ENST00000475367 SLC27A2O14975 620 aa11.79□□□□□ -0.52
SPTAN1-206ENST00000475367 RBM6P78332 1123 aaKnown RBP11.79□□□□□ -0.52
SPTAN1-206ENST00000475367 ZMYM1Q5SVZ6 1142 aa11.79□□□□□ -0.52
SPTAN1-206ENST00000475367 NOL8Q76FK4 1167 aaKnown RBP11.79□□□□□ -0.52
SPTAN1-206ENST00000475367 LPIN2Q92539 896 aa11.79□□□□□ -0.52
SPTAN1-206ENST00000475367 TMX3Q96JJ7 454 aa11.79□□□□□ -0.52
SPTAN1-206ENST00000475367 HELLSQ9NRZ9 838 aa11.79□□□□□ -0.52
SPTAN1-206ENST00000475367 ABCC12Q96J65 1359 aa11.79□□□□□ -0.52
SPTAN1-206ENST00000475367 ZNF772Q68DY9 489 aaPredicted RBP11.79□□□□□ -0.52
SPTAN1-206ENST00000475367 PI16Q6UXB8 463 aa11.79□□□□□ -0.52
SPTAN1-206ENST00000475367 ZNF512BQ96KM6 892 aaPredicted RBP11.79□□□□□ -0.52
SPTAN1-206ENST00000475367 CDC5LQ99459 802 aaKnown RBP11.79□□□□□ -0.52
SPTAN1-206ENST00000475367 SNAP23O00161 211 aa11.78□□□□□ -0.52
SPTAN1-206ENST00000475367 SLC5A1P13866 664 aa11.78□□□□□ -0.52
SPTAN1-206ENST00000475367 ZKSCAN1P17029 563 aaPredicted RBP11.78□□□□□ -0.52
SPTAN1-206ENST00000475367 CASTP20810 708 aaKnown RBP11.78□□□□□ -0.52
SPTAN1-206ENST00000475367 SSFA2P28290 1259 aa11.78□□□□□ -0.52
SPTAN1-206ENST00000475367 MCAMP43121 646 aa11.78□□□□□ -0.52
SPTAN1-206ENST00000475367 PHKA1P46020 1223 aa11.78□□□□□ -0.52
SPTAN1-206ENST00000475367 ADCK5Q3MIX3 580 aa11.78□□□□□ -0.52
SPTAN1-206ENST00000475367 SLC27A3Q5K4L6 730 aa11.78□□□□□ -0.52
SPTAN1-206ENST00000475367 CCDC102BQ68D86 513 aa11.78□□□□□ -0.52
SPTAN1-206ENST00000475367 JAKMIP1Q96N16 626 aaKnown RBP11.78□□□□□ -0.52
SPTAN1-206ENST00000475367 SPEF2Q9C093 1822 aa11.78□□□□□ -0.52
SPTAN1-206ENST00000475367 CPA1P15085 419 aa11.78□□□□□ -0.52
SPTAN1-206ENST00000475367 TPTE2Q6XPS3 522 aa11.78□□□□□ -0.52
SPTAN1-206ENST00000475367 ANKRD18AQ8IVF6 992 aa11.78□□□□□ -0.52
SPTAN1-206ENST00000475367 CCDC24Q8N4L8 307 aa11.78□□□□□ -0.52
SPTAN1-206ENST00000475367 IL27Q8NEV9 243 aa11.78□□□□□ -0.52
SPTAN1-206ENST00000475367 TTC14Q96N46 770 aa11.78□□□□□ -0.52
SPTAN1-206ENST00000475367 TM6SF1Q9BZW5 370 aa11.78□□□□□ -0.52
SPTAN1-206ENST00000475367 COL4A1P02462 1669 aa11.77□□□□□ -0.52
SPTAN1-206ENST00000475367 UQCRFS1P1P0C7P4 283 aa11.77□□□□□ -0.53
SPTAN1-206ENST00000475367 CHRNDQ07001 517 aa11.77□□□□□ -0.53
SPTAN1-206ENST00000475367 LRRFIP1Q32MZ4 808 aaKnown RBP11.77□□□□□ -0.53
SPTAN1-206ENST00000475367 U3KPZ7 1027 aaPredicted RBP11.77□□□□□ -0.53
SPTAN1-206ENST00000475367 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP11.76□□□□□ -0.53
SPTAN1-206ENST00000475367 ADRA2BP18089 450 aa11.76□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 44.6 ms