RNA–Protein interactions for RNA: ENST00000475268.5

SEC61A2-213, Transcript of Sec61 translocon alpha 2 subunit, humanhuman

TSL 1 (best)

Gene SEC61A2, Length 2,183 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC61A2-213ENST00000475268 PPIL4Q8WUA2 492 aaKnown RBP eCLIP22.01■■□□□ 1.11
SEC61A2-213ENST00000475268 KCNB2Q92953 911 aa22.01■■□□□ 1.11
SEC61A2-213ENST00000475268 CWC22Q9HCG8 908 aaKnown RBP22.01■■□□□ 1.11
SEC61A2-213ENST00000475268 NHSQ6T4R5 1651 aa22■■□□□ 1.11
SEC61A2-213ENST00000475268 FKBP4Q02790 459 aaKnown RBP eCLIP22■■□□□ 1.11
SEC61A2-213ENST00000475268 IL27Q8NEV9 243 aa22■■□□□ 1.11
SEC61A2-213ENST00000475268 SEC62Q99442 399 aaKnown RBP22■■□□□ 1.11
SEC61A2-213ENST00000475268 CCNL1Q9UK58 526 aaPredicted RBP22■■□□□ 1.11
SEC61A2-213ENST00000475268 TAF5LO75529 589 aa21.99■■□□□ 1.11
SEC61A2-213ENST00000475268 DEKP35659 375 aaKnown RBP21.99■■□□□ 1.11
SEC61A2-213ENST00000475268 ADCK5Q3MIX3 580 aa21.99■■□□□ 1.11
SEC61A2-213ENST00000475268 MCMDC2Q4G0Z9 681 aa21.99■■□□□ 1.11
SEC61A2-213ENST00000475268 SEPT12Q8IYM1 358 aa21.99■■□□□ 1.11
SEC61A2-213ENST00000475268 JAKMIP1Q96N16 626 aaKnown RBP21.99■■□□□ 1.11
SEC61A2-213ENST00000475268 CCDC129Q6ZRS4 1044 aa21.99■■□□□ 1.11
SEC61A2-213ENST00000475268 SLC27A2O14975 620 aa21.98■■□□□ 1.11
SEC61A2-213ENST00000475268 PDE8BO95263 885 aa21.98■■□□□ 1.11
SEC61A2-213ENST00000475268 HSP90B1P14625 803 aaKnown RBP21.98■■□□□ 1.11
SEC61A2-213ENST00000475268 CPA1P15085 419 aa21.98■■□□□ 1.11
SEC61A2-213ENST00000475268 VGLL2Q8N8G2 317 aa21.98■■□□□ 1.11
SEC61A2-213ENST00000475268 ATRNO75882 1429 aa21.98■■□□□ 1.11
SEC61A2-213ENST00000475268 ONECUT3O60422 494 aaPredicted RBP21.98■■□□□ 1.11
SEC61A2-213ENST00000475268 SSFA2P28290 1259 aa21.98■■□□□ 1.11
SEC61A2-213ENST00000475268 CCDC152Q4G0S7 254 aa21.98■■□□□ 1.11
SEC61A2-213ENST00000475268 RC3H1Q5TC82 1133 aaKnown RBP21.98■■□□□ 1.11
SEC61A2-213ENST00000475268 TTC14Q96N46 770 aa21.98■■□□□ 1.11
SEC61A2-213ENST00000475268 SEC31BQ9NQW1 1179 aa21.98■■□□□ 1.11
SEC61A2-213ENST00000475268 BCORQ6W2J9 1755 aa21.98■■□□□ 1.11
SEC61A2-213ENST00000475268 SLFNL1Q499Z3 407 aa21.97■■□□□ 1.11
SEC61A2-213ENST00000475268 RNF20Q5VTR2 975 aa21.97■■□□□ 1.11
SEC61A2-213ENST00000475268 GNPATO15228 680 aa21.97■■□□□ 1.11
SEC61A2-213ENST00000475268 AK2P54819 239 aa21.97■■□□□ 1.11
SEC61A2-213ENST00000475268 CUL4AQ13619 759 aa21.97■■□□□ 1.11
SEC61A2-213ENST00000475268 BICDL1Q6ZP65 573 aa21.97■■□□□ 1.11
SEC61A2-213ENST00000475268 MPHOSPH8Q99549 860 aa21.97■■□□□ 1.11
SEC61A2-213ENST00000475268 MROH5Q6ZUA9 1318 aa21.96■■□□□ 1.11
SEC61A2-213ENST00000475268 RPS6KA4O75676 772 aa21.96■■□□□ 1.11
SEC61A2-213ENST00000475268 NUCB2P80303 420 aa21.96■■□□□ 1.11
SEC61A2-213ENST00000475268 SCARF1Q14162 830 aa21.96■■□□□ 1.11
SEC61A2-213ENST00000475268 HELBQ8NG08 1087 aaPredicted RBP21.96■■□□□ 1.11
SEC61A2-213ENST00000475268 TM6SF1Q9BZW5 370 aa21.96■■□□□ 1.11
SEC61A2-213ENST00000475268 DDX60Q8IY21 1712 aaKnown RBP21.95■■□□□ 1.11
SEC61A2-213ENST00000475268 GBP4Q96PP9 640 aa21.95■■□□□ 1.1
SEC61A2-213ENST00000475268 ZSWIM6Q9HCJ5 1215 aa21.95■■□□□ 1.1
SEC61A2-213ENST00000475268 CYP46A1Q9Y6A2 500 aa21.95■■□□□ 1.1
SEC61A2-213ENST00000475268 TICAM2Q86XR7 235 aa21.95■■□□□ 1.1
SEC61A2-213ENST00000475268 QTRT2Q9H974 415 aaKnown RBP21.95■■□□□ 1.1
SEC61A2-213ENST00000475268 HELLSQ9NRZ9 838 aa21.95■■□□□ 1.1
SEC61A2-213ENST00000475268 RNF113AO15541 343 aaKnown RBP21.94■■□□□ 1.1
SEC61A2-213ENST00000475268 USPL1Q5W0Q7 1092 aa21.94■■□□□ 1.1
SEC61A2-213ENST00000475268 LARP6Q9BRS8 491 aaKnown RBP21.94■■□□□ 1.1
SEC61A2-213ENST00000475268 PDRG1Q9NUG6 133 aa21.94■■□□□ 1.1
SEC61A2-213ENST00000475268 ZAP70P43403 619 aa21.94■■□□□ 1.1
SEC61A2-213ENST00000475268 PKP1Q13835 747 aa21.94■■□□□ 1.1
SEC61A2-213ENST00000475268 ERFEQ4G0M1 354 aa21.94■■□□□ 1.1
SEC61A2-213ENST00000475268 ZMYM1Q5SVZ6 1142 aa21.94■■□□□ 1.1
SEC61A2-213ENST00000475268 TBC1D9BQ66K14 1250 aa21.94■■□□□ 1.1
SEC61A2-213ENST00000475268 SRP68Q9UHB9 627 aaKnown RBP21.94■■□□□ 1.1
SEC61A2-213ENST00000475268 NARFQ9UHQ1 456 aa21.94■■□□□ 1.1
SEC61A2-213ENST00000475268 LRP5O75197 1615 aa21.93■■□□□ 1.1
SEC61A2-213ENST00000475268 SPEF2Q9C093 1822 aa21.93■■□□□ 1.1
SEC61A2-213ENST00000475268 PUM3Q15397 648 aaKnown RBP21.93■■□□□ 1.1
SEC61A2-213ENST00000475268 PI16Q6UXB8 463 aa21.93■■□□□ 1.1
SEC61A2-213ENST00000475268 RUFY3Q7L099 469 aa21.93■■□□□ 1.1
SEC61A2-213ENST00000475268 INTS4Q96HW7 963 aaKnown RBP21.93■■□□□ 1.1
SEC61A2-213ENST00000475268 BCL2L12Q9HB09 334 aa21.93■■□□□ 1.1
SEC61A2-213ENST00000475268 RTCBQ9Y3I0 505 aaKnown RBP21.93■■□□□ 1.1
SEC61A2-213ENST00000475268 ABCC12Q96J65 1359 aa21.93■■□□□ 1.1
SEC61A2-213ENST00000475268 PSMA5P28066 241 aa21.92■■□□□ 1.1
SEC61A2-213ENST00000475268 IGHMBP2P38935 993 aaKnown RBP21.92■■□□□ 1.1
SEC61A2-213ENST00000475268 VPS53Q5VIR6 699 aa21.92■■□□□ 1.1
SEC61A2-213ENST00000475268 HMG20BQ9P0W2 317 aa21.92■■□□□ 1.1
SEC61A2-213ENST00000475268 LIMCH1Q9UPQ0 1083 aa21.92■■□□□ 1.1
SEC61A2-213ENST00000475268 TAF6LQ9Y6J9 622 aa21.92■■□□□ 1.1
SEC61A2-213ENST00000475268 DDX11L8A8MPP1 907 aa21.92■■□□□ 1.1
SEC61A2-213ENST00000475268 ZPR1O75312 459 aa21.92■■□□□ 1.1
SEC61A2-213ENST00000475268 GSE1Q14687 1217 aa21.92■■□□□ 1.1
SEC61A2-213ENST00000475268 LRRFIP1Q32MZ4 808 aaKnown RBP21.92■■□□□ 1.1
SEC61A2-213ENST00000475268 LPIN2Q92539 896 aa21.92■■□□□ 1.1
SEC61A2-213ENST00000475268 U3KPZ7 1027 aaPredicted RBP21.92■■□□□ 1.1
SEC61A2-213ENST00000475268 GTF2E1P29083 439 aaPredicted RBP21.91■■□□□ 1.1
SEC61A2-213ENST00000475268 MCAMP43121 646 aa21.91■■□□□ 1.1
SEC61A2-213ENST00000475268 RTL9Q8NET4 1388 aa21.91■■□□□ 1.1
SEC61A2-213ENST00000475268 RPAP1Q9BWH6 1393 aaPredicted RBP21.91■■□□□ 1.1
SEC61A2-213ENST00000475268 RGL2O15211 777 aa21.9■■□□□ 1.1
SEC61A2-213ENST00000475268 CYP2E1P05181 493 aaPredicted RBP21.9■■□□□ 1.1
SEC61A2-213ENST00000475268 CCDC102BQ68D86 513 aa21.9■■□□□ 1.1
SEC61A2-213ENST00000475268 AMIGO3Q86WK7 504 aa21.9■■□□□ 1.1
SEC61A2-213ENST00000475268 LAMB2P55268 1798 aa21.9■■□□□ 1.1
SEC61A2-213ENST00000475268 SBF2Q86WG5 1849 aa21.9■■□□□ 1.1
SEC61A2-213ENST00000475268 MAST3O60307 1309 aa21.9■■□□□ 1.1
SEC61A2-213ENST00000475268 SCN7AQ01118 1682 aa21.9■■□□□ 1.1
SEC61A2-213ENST00000475268 FGFR2P21802 821 aa21.89■■□□□ 1.1
SEC61A2-213ENST00000475268 ZNF512BQ96KM6 892 aaPredicted RBP21.89■■□□□ 1.1
SEC61A2-213ENST00000475268 SNAP23O00161 211 aa21.89■■□□□ 1.09
SEC61A2-213ENST00000475268 PHKA1P46020 1223 aa21.89■■□□□ 1.09
SEC61A2-213ENST00000475268 TSGA10IPQ3SY00 556 aa21.89■■□□□ 1.09
SEC61A2-213ENST00000475268 BLOC1S2Q6QNY1 142 aa21.89■■□□□ 1.09
SEC61A2-213ENST00000475268 SETDB2Q96T68 719 aa21.89■■□□□ 1.09
SEC61A2-213ENST00000475268 BCL11BQ9C0K0 894 aaPredicted RBP21.89■■□□□ 1.09
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms