RNA–Protein interactions for RNA: ENST00000474240.1

ECHDC1-213, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

TSL 2

Gene ECHDC1, Length 482 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-213ENST00000474240 STK32AQ8WU08 396 aa6.21□□□□□ -1.42
ECHDC1-213ENST00000474240 ZFATQ9P243 1243 aa6.21□□□□□ -1.42
ECHDC1-213ENST00000474240 STOML1Q9UBI4 398 aa6.21□□□□□ -1.42
ECHDC1-213ENST00000474240 MTMR7Q9Y216 660 aa6.21□□□□□ -1.42
ECHDC1-213ENST00000474240 HIF1AQ16665 826 aa6.2□□□□□ -1.42
ECHDC1-213ENST00000474240 HFE2Q6ZVN8 426 aa6.2□□□□□ -1.42
ECHDC1-213ENST00000474240 DHX32Q7L7V1 743 aaKnown RBP6.2□□□□□ -1.42
ECHDC1-213ENST00000474240 TMEM130Q8N3G9 435 aa6.2□□□□□ -1.42
ECHDC1-213ENST00000474240 COL26A1Q96A83 441 aa6.2□□□□□ -1.42
ECHDC1-213ENST00000474240 VTI1AQ96AJ9 217 aa6.2□□□□□ -1.42
ECHDC1-213ENST00000474240 PATL2C9JE40 543 aaKnown RBP6.19□□□□□ -1.42
ECHDC1-213ENST00000474240 EIF2AK2P19525 551 aaKnown RBP6.19□□□□□ -1.42
ECHDC1-213ENST00000474240 WEE1P30291 646 aa6.19□□□□□ -1.42
ECHDC1-213ENST00000474240 GRIK1P39086 918 aa6.19□□□□□ -1.42
ECHDC1-213ENST00000474240 GPLD1P80108 840 aa6.19□□□□□ -1.42
ECHDC1-213ENST00000474240 FAM69CQ0P6D2 419 aa6.19□□□□□ -1.42
ECHDC1-213ENST00000474240 TRPM4Q8TD43 1214 aa6.19□□□□□ -1.42
ECHDC1-213ENST00000474240 SCG3Q8WXD2 468 aaKnown RBP6.19□□□□□ -1.42
ECHDC1-213ENST00000474240 ADGRE2Q9UHX3 823 aa6.19□□□□□ -1.42
ECHDC1-213ENST00000474240 ATAD2Q6PL18 1390 aa6.18□□□□□ -1.42
ECHDC1-213ENST00000474240 TMEM88BA6NKF7 163 aa6.18□□□□□ -1.42
ECHDC1-213ENST00000474240 TGFBR3LH3BV60 316 aa6.18□□□□□ -1.42
ECHDC1-213ENST00000474240 MAP3K6O95382 1288 aa6.18□□□□□ -1.42
ECHDC1-213ENST00000474240 LCE4AQ5TA78 99 aa6.18□□□□□ -1.42
ECHDC1-213ENST00000474240 IER5Q5VY09 327 aa6.18□□□□□ -1.42
ECHDC1-213ENST00000474240 OGFOD2Q6N063 350 aa6.18□□□□□ -1.42
ECHDC1-213ENST00000474240 INTS5Q6P9B9 1019 aaKnown RBP6.18□□□□□ -1.42
ECHDC1-213ENST00000474240 DTX1Q86Y01 620 aa6.18□□□□□ -1.42
ECHDC1-213ENST00000474240 RETREG2Q8NC44 543 aa6.18□□□□□ -1.42
ECHDC1-213ENST00000474240 TTC9Q92623 222 aa6.18□□□□□ -1.42
ECHDC1-213ENST00000474240 UBL7Q96S82 380 aaPredicted RBP6.18□□□□□ -1.42
ECHDC1-213ENST00000474240 DHX15O43143 795 aaKnown RBP6.17□□□□□ -1.42
ECHDC1-213ENST00000474240 C21orf2O43822 256 aa6.17□□□□□ -1.42
ECHDC1-213ENST00000474240 WNT11O96014 354 aa6.17□□□□□ -1.42
ECHDC1-213ENST00000474240 RARAP10276 462 aa6.17□□□□□ -1.42
ECHDC1-213ENST00000474240 ATP2B4P23634 1241 aa6.17□□□□□ -1.42
ECHDC1-213ENST00000474240 NFIAQ12857 509 aa6.17□□□□□ -1.42
ECHDC1-213ENST00000474240 GDF6Q6KF10 455 aaPredicted RBP6.17□□□□□ -1.42
ECHDC1-213ENST00000474240 ZC3HAV1Q7Z2W4 902 aaKnown RBP6.17□□□□□ -1.42
ECHDC1-213ENST00000474240 C2orf49Q9BVC5 232 aaPredicted RBP6.17□□□□□ -1.42
ECHDC1-213ENST00000474240 CXXC1Q9P0U4 656 aaPredicted RBP6.17□□□□□ -1.42
ECHDC1-213ENST00000474240 EPB42P16452 691 aa6.16□□□□□ -1.42
ECHDC1-213ENST00000474240 TARSP26639 723 aaKnown RBP6.16□□□□□ -1.42
ECHDC1-213ENST00000474240 SETDB1Q15047 1291 aa6.16□□□□□ -1.42
ECHDC1-213ENST00000474240 ARMC10Q8N2F6 343 aa6.16□□□□□ -1.42
ECHDC1-213ENST00000474240 IFT43Q96FT9 208 aa6.16□□□□□ -1.42
ECHDC1-213ENST00000474240 C7orf69Q9H7B7 122 aa6.16□□□□□ -1.42
ECHDC1-213ENST00000474240 DMGDHQ9UI17 866 aaKnown RBP6.16□□□□□ -1.42
ECHDC1-213ENST00000474240 BCS1LQ9Y276 419 aa6.16□□□□□ -1.42
ECHDC1-213ENST00000474240 C8AP07357 584 aa6.15□□□□□ -1.42
ECHDC1-213ENST00000474240 OCLNQ16625 522 aa6.15□□□□□ -1.42
ECHDC1-213ENST00000474240 ABI1Q8IZP0 508 aa6.15□□□□□ -1.42
ECHDC1-213ENST00000474240 CHMP7Q8WUX9 453 aaPredicted RBP6.15□□□□□ -1.42
ECHDC1-213ENST00000474240 HMX2A2RU54 273 aa6.14□□□□□ -1.43
ECHDC1-213ENST00000474240 PRR19A6NJB7 356 aa6.14□□□□□ -1.43
ECHDC1-213ENST00000474240 PRMT3O60678 531 aa6.14□□□□□ -1.43
ECHDC1-213ENST00000474240 SASH3O75995 380 aa6.14□□□□□ -1.43
ECHDC1-213ENST00000474240 WISP1O95388 367 aa6.14□□□□□ -1.43
ECHDC1-213ENST00000474240 BRD1O95696 1058 aa6.14□□□□□ -1.43
ECHDC1-213ENST00000474240 IDH3AP50213 366 aa6.14□□□□□ -1.43
ECHDC1-213ENST00000474240 RTN1Q16799 776 aa6.14□□□□□ -1.43
ECHDC1-213ENST00000474240 TRIM42Q8IWZ5 723 aa6.14□□□□□ -1.43
ECHDC1-213ENST00000474240 HOMEZQ8IX15 550 aa6.14□□□□□ -1.43
ECHDC1-213ENST00000474240 IL22RA1Q8N6P7 574 aa6.14□□□□□ -1.43
ECHDC1-213ENST00000474240 UTP4Q969X6 686 aaKnown RBP6.14□□□□□ -1.43
ECHDC1-213ENST00000474240 PLD4Q96BZ4 506 aa6.14□□□□□ -1.43
ECHDC1-213ENST00000474240 DBNDD2Q9BQY9 259 aa6.14□□□□□ -1.43
ECHDC1-213ENST00000474240 TRAIPQ9BWF2 469 aa6.14□□□□□ -1.43
ECHDC1-213ENST00000474240 PDIA4P13667 645 aaKnown RBP6.13□□□□□ -1.43
ECHDC1-213ENST00000474240 SSFA2P28290 1259 aa6.13□□□□□ -1.43
ECHDC1-213ENST00000474240 NRLP54845 237 aa6.13□□□□□ -1.43
ECHDC1-213ENST00000474240 MYO19Q96H55 970 aa6.13□□□□□ -1.43
ECHDC1-213ENST00000474240 SRA1Q9HD15 236 aaKnown RBP6.13□□□□□ -1.43
ECHDC1-213ENST00000474240 J3QW42 95 aa6.12□□□□□ -1.43
ECHDC1-213ENST00000474240 INPP5BP32019 993 aa6.12□□□□□ -1.43
ECHDC1-213ENST00000474240 FKBP5Q13451 457 aaPredicted RBP6.12□□□□□ -1.43
ECHDC1-213ENST00000474240 RNF43Q68DV7 783 aa6.12□□□□□ -1.43
ECHDC1-213ENST00000474240 ACAD11Q709F0 780 aa6.12□□□□□ -1.43
ECHDC1-213ENST00000474240 DCAF11Q8TEB1 546 aa6.12□□□□□ -1.43
ECHDC1-213ENST00000474240 PRIMPOLQ96LW4 560 aa6.12□□□□□ -1.43
ECHDC1-213ENST00000474240 KRTAP4-11Q9BYQ6 195 aa6.12□□□□□ -1.43
ECHDC1-213ENST00000474240 ARID4AP29374 1257 aaPredicted RBP6.11□□□□□ -1.43
ECHDC1-213ENST00000474240 MAP4K3Q8IVH8 894 aa6.11□□□□□ -1.43
ECHDC1-213ENST00000474240 SHKBP1Q8TBC3 707 aa6.11□□□□□ -1.43
ECHDC1-213ENST00000474240 NSUN5Q96P11 429 aaKnown RBP6.11□□□□□ -1.43
ECHDC1-213ENST00000474240 CEP41Q9BYV8 373 aa6.11□□□□□ -1.43
ECHDC1-213ENST00000474240 ARSDP51689 593 aa6.1□□□□□ -1.43
ECHDC1-213ENST00000474240 KCNA1Q09470 495 aa6.1□□□□□ -1.43
ECHDC1-213ENST00000474240 UVSSAQ2YD98 709 aa6.1□□□□□ -1.43
ECHDC1-213ENST00000474240 C16orf46Q6P387 395 aa6.1□□□□□ -1.43
ECHDC1-213ENST00000474240 POU5F2Q8N7G0 328 aa6.1□□□□□ -1.43
ECHDC1-213ENST00000474240 GALNT11Q8NCW6 608 aa6.1□□□□□ -1.43
ECHDC1-213ENST00000474240 CCER1Q8TC90 406 aaPredicted RBP6.1□□□□□ -1.43
ECHDC1-213ENST00000474240 KLK14Q9P0G3 267 aa6.1□□□□□ -1.43
ECHDC1-213ENST00000474240 TRIM33Q9UPN9 1127 aa6.1□□□□□ -1.43
ECHDC1-213ENST00000474240 GHRHP01286 108 aa6.09□□□□□ -1.43
ECHDC1-213ENST00000474240 HOXA10P31260 410 aaPredicted RBP6.09□□□□□ -1.43
ECHDC1-213ENST00000474240 ABTB2Q8N961 1025 aa6.09□□□□□ -1.43
ECHDC1-213ENST00000474240 TLR7Q9NYK1 1049 aaKnown RBP6.09□□□□□ -1.43
ECHDC1-213ENST00000474240 EGFL7Q9UHF1 273 aa6.09□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 13.5 ms