RNA–Protein interactions for RNA: ENST00000474025.1

SNRNP40-204, Transcript of small nuclear ribonucleoprotein U5 subunit 40, humanhuman

TSL 3

Gene SNRNP40, Length 581 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP40-204ENST00000474025 NLRP3Q96P20 1036 aa6.8□□□□□ -1.32
SNRNP40-204ENST00000474025 ZIC5Q96T25 663 aa6.8□□□□□ -1.32
SNRNP40-204ENST00000474025 DUOX1Q9NRD9 1551 aa6.8□□□□□ -1.32
SNRNP40-204ENST00000474025 ERBB4Q15303 1308 aa6.79□□□□□ -1.32
SNRNP40-204ENST00000474025 SHTN1A0MZ66 631 aa6.79□□□□□ -1.32
SNRNP40-204ENST00000474025 YDJCA8MPS7 323 aa6.79□□□□□ -1.32
SNRNP40-204ENST00000474025 NOGQ13253 232 aa6.79□□□□□ -1.32
SNRNP40-204ENST00000474025 DGKZQ13574 1117 aa6.79□□□□□ -1.32
SNRNP40-204ENST00000474025 SLC10A5Q5PT55 438 aa6.79□□□□□ -1.32
SNRNP40-204ENST00000474025 DPP8Q6V1X1 898 aaPredicted RBP6.79□□□□□ -1.32
SNRNP40-204ENST00000474025 SUPT20HQ8NEM7 779 aa6.79□□□□□ -1.32
SNRNP40-204ENST00000474025 THUMPD2Q9BTF0 503 aaKnown RBP6.79□□□□□ -1.32
SNRNP40-204ENST00000474025 UTP14AQ9BVJ6 771 aaKnown RBP6.79□□□□□ -1.32
SNRNP40-204ENST00000474025 TMX4Q9H1E5 349 aaPredicted RBP6.79□□□□□ -1.32
SNRNP40-204ENST00000474025 ZNF408Q9H9D4 720 aa6.79□□□□□ -1.32
SNRNP40-204ENST00000474025 DLG5Q8TDM6 1919 aa6.79□□□□□ -1.32
SNRNP40-204ENST00000474025 A0A0C4DFX4 3053 aa6.79□□□□□ -1.32
SNRNP40-204ENST00000474025 LAMB2P55268 1798 aa6.78□□□□□ -1.32
SNRNP40-204ENST00000474025 RANBP2P49792 3224 aaKnown RBP6.78□□□□□ -1.32
SNRNP40-204ENST00000474025 FAM155AB1AL88 458 aaPredicted RBP6.78□□□□□ -1.32
SNRNP40-204ENST00000474025 BBOX1O75936 387 aa6.78□□□□□ -1.32
SNRNP40-204ENST00000474025 PLCG2P16885 1265 aa6.78□□□□□ -1.32
SNRNP40-204ENST00000474025 HUNKP57058 714 aa6.78□□□□□ -1.32
SNRNP40-204ENST00000474025 TNIP1Q15025 636 aa6.78□□□□□ -1.32
SNRNP40-204ENST00000474025 PDIA6Q15084 440 aa6.78□□□□□ -1.32
SNRNP40-204ENST00000474025 NFE2L2Q16236 605 aa6.78□□□□□ -1.32
SNRNP40-204ENST00000474025 PROSER3Q2NL68 480 aa6.78□□□□□ -1.32
SNRNP40-204ENST00000474025 DLK2Q6UY11 383 aa6.78□□□□□ -1.32
SNRNP40-204ENST00000474025 CDC37L1Q7L3B6 337 aa6.78□□□□□ -1.32
SNRNP40-204ENST00000474025 SP8Q8IXZ3 490 aa6.78□□□□□ -1.32
SNRNP40-204ENST00000474025 MICALL2Q8IY33 904 aa6.78□□□□□ -1.32
SNRNP40-204ENST00000474025 MPNDQ8N594 471 aa6.78□□□□□ -1.32
SNRNP40-204ENST00000474025 PLEKHF1Q96S99 279 aa6.78□□□□□ -1.32
SNRNP40-204ENST00000474025 BCL2L13Q9BXK5 485 aa6.78□□□□□ -1.32
SNRNP40-204ENST00000474025 CNOT7Q9UIV1 285 aaKnown RBP6.78□□□□□ -1.32
SNRNP40-204ENST00000474025 LRRC37AA6NMS7 1700 aa6.78□□□□□ -1.32
SNRNP40-204ENST00000474025 SZT2Q5T011 3432 aa6.78□□□□□ -1.32
SNRNP40-204ENST00000474025 ANKRD36CQ5JPF3 1778 aa6.77□□□□□ -1.33
SNRNP40-204ENST00000474025 EGFRP00533 1210 aa6.77□□□□□ -1.33
SNRNP40-204ENST00000474025 ANXA1P04083 346 aa6.77□□□□□ -1.33
SNRNP40-204ENST00000474025 HCLS1P14317 486 aaPredicted RBP6.77□□□□□ -1.33
SNRNP40-204ENST00000474025 GRAPQ13588 217 aa6.77□□□□□ -1.33
SNRNP40-204ENST00000474025 USP48Q86UV5 1035 aa6.77□□□□□ -1.33
SNRNP40-204ENST00000474025 NLRP10Q86W26 655 aa6.77□□□□□ -1.33
SNRNP40-204ENST00000474025 GRAPLQ8TC17 118 aaPredicted RBP6.77□□□□□ -1.33
SNRNP40-204ENST00000474025 DPF2Q92785 391 aa6.77□□□□□ -1.33
SNRNP40-204ENST00000474025 OCEL1Q9H607 264 aa6.77□□□□□ -1.33
SNRNP40-204ENST00000474025 SAGE1Q9NXZ1 904 aa6.77□□□□□ -1.33
SNRNP40-204ENST00000474025 H7C1D1 291 aa6.76□□□□□ -1.33
SNRNP40-204ENST00000474025 PSMD14O00487 310 aa6.76□□□□□ -1.33
SNRNP40-204ENST00000474025 NEFMP07197 916 aa6.76□□□□□ -1.33
SNRNP40-204ENST00000474025 EIF2S2P20042 333 aaKnown RBP6.76□□□□□ -1.33
SNRNP40-204ENST00000474025 HSP90AB3PQ58FF7 597 aa6.76□□□□□ -1.33
SNRNP40-204ENST00000474025 DDX46Q7L014 1031 aaKnown RBP6.76□□□□□ -1.33
SNRNP40-204ENST00000474025 SAMD7Q7Z3H4 446 aa6.76□□□□□ -1.33
SNRNP40-204ENST00000474025 KRT26Q7Z3Y9 468 aa6.76□□□□□ -1.33
SNRNP40-204ENST00000474025 TMC4Q7Z404 712 aa6.76□□□□□ -1.33
SNRNP40-204ENST00000474025 GBA2Q9HCG7 927 aaPredicted RBP6.76□□□□□ -1.33
SNRNP40-204ENST00000474025 TSPYL4Q9UJ04 414 aa6.76□□□□□ -1.33
SNRNP40-204ENST00000474025 SH3TC1Q8TE82 1336 aa6.76□□□□□ -1.33
SNRNP40-204ENST00000474025 TAF1P21675 1872 aa6.75□□□□□ -1.33
SNRNP40-204ENST00000474025 COL4A1P02462 1669 aa6.75□□□□□ -1.33
SNRNP40-204ENST00000474025 RTL9Q8NET4 1388 aa6.75□□□□□ -1.33
SNRNP40-204ENST00000474025 POTEMA6NI47 508 aa6.75□□□□□ -1.33
SNRNP40-204ENST00000474025 ADM5C9JUS6 153 aa6.75□□□□□ -1.33
SNRNP40-204ENST00000474025 RPS12P25398 132 aaKnown RBP6.75□□□□□ -1.33
SNRNP40-204ENST00000474025 SOX10P56693 466 aa6.75□□□□□ -1.33
SNRNP40-204ENST00000474025 KIF23Q02241 960 aaPredicted RBP6.75□□□□□ -1.33
SNRNP40-204ENST00000474025 TCIRG1Q13488 830 aa6.75□□□□□ -1.33
SNRNP40-204ENST00000474025 TBC1D10BQ4KMP7 808 aaPredicted RBP6.75□□□□□ -1.33
SNRNP40-204ENST00000474025 RGMBQ6NW40 437 aa6.75□□□□□ -1.33
SNRNP40-204ENST00000474025 COPS6Q7L5N1 327 aa6.75□□□□□ -1.33
SNRNP40-204ENST00000474025 XAGE3Q8WTP9 111 aa6.75□□□□□ -1.33
SNRNP40-204ENST00000474025 DBNDD1Q9H9R9 158 aa6.75□□□□□ -1.33
SNRNP40-204ENST00000474025 TRMT112Q9UI30 125 aaKnown RBP6.75□□□□□ -1.33
SNRNP40-204ENST00000474025 DDX60Q8IY21 1712 aaKnown RBP6.75□□□□□ -1.33
SNRNP40-204ENST00000474025 MAPK8IP3Q9UPT6 1336 aa6.75□□□□□ -1.33
SNRNP40-204ENST00000474025 ECE2O60344 883 aa6.74□□□□□ -1.33
SNRNP40-204ENST00000474025 TRPA1O75762 1119 aa6.74□□□□□ -1.33
SNRNP40-204ENST00000474025 SLC10A3P09131 477 aa6.74□□□□□ -1.33
SNRNP40-204ENST00000474025 ZNF157P51786 506 aaPredicted RBP6.74□□□□□ -1.33
SNRNP40-204ENST00000474025 AIMP1Q12904 312 aaKnown RBP6.74□□□□□ -1.33
SNRNP40-204ENST00000474025 WASHC4Q2M389 1173 aa6.74□□□□□ -1.33
SNRNP40-204ENST00000474025 POTEGQ6S5H5 508 aa6.74□□□□□ -1.33
SNRNP40-204ENST00000474025 C2orf69Q8N8R5 385 aa6.74□□□□□ -1.33
SNRNP40-204ENST00000474025 NECTIN2Q92692 538 aa6.74□□□□□ -1.33
SNRNP40-204ENST00000474025 CELF1Q92879 486 aaKnown RBP6.74□□□□□ -1.33
SNRNP40-204ENST00000474025 CCDC102AQ96A19 550 aa6.74□□□□□ -1.33
SNRNP40-204ENST00000474025 ZNF428Q96B54 188 aa6.74□□□□□ -1.33
SNRNP40-204ENST00000474025 KCNQ5Q9NR82 932 aa6.74□□□□□ -1.33
SNRNP40-204ENST00000474025 BABAM1Q9NWV8 329 aa6.74□□□□□ -1.33
SNRNP40-204ENST00000474025 RNF186Q9NXI6 227 aa6.74□□□□□ -1.33
SNRNP40-204ENST00000474025 POLLQ9UGP5 575 aa6.74□□□□□ -1.33
SNRNP40-204ENST00000474025 ASTN2O75129 1339 aaPredicted RBP6.74□□□□□ -1.33
SNRNP40-204ENST00000474025 SCN9AQ15858 1988 aa6.73□□□□□ -1.33
SNRNP40-204ENST00000474025 RIMBP2O15034 1052 aa6.73□□□□□ -1.33
SNRNP40-204ENST00000474025 PSEN1P49768 467 aa6.73□□□□□ -1.33
SNRNP40-204ENST00000474025 SF3B3Q15393 1217 aaKnown RBP6.73□□□□□ -1.33
SNRNP40-204ENST00000474025 PKN2Q16513 984 aaKnown RBP6.73□□□□□ -1.33
SNRNP40-204ENST00000474025 KIF4BQ2VIQ3 1234 aa6.73□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 42.6 ms