RNA–Protein interactions for RNA: ENST00000473961.5

BRCA1-212, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 2

Gene BRCA1, Length 958 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-212ENST00000473961 EFHC2Q5JST6 749 aa6.67□□□□□ -1.34
BRCA1-212ENST00000473961 TREML1Q86YW5 311 aa6.67□□□□□ -1.34
BRCA1-212ENST00000473961 EDEM1Q92611 657 aa6.67□□□□□ -1.34
BRCA1-212ENST00000473961 NEUROD4Q9HD90 331 aa6.67□□□□□ -1.34
BRCA1-212ENST00000473961 HCN2Q9UL51 889 aa6.67□□□□□ -1.34
BRCA1-212ENST00000473961 FNDC3AQ9Y2H6 1198 aaKnown RBP6.67□□□□□ -1.34
BRCA1-212ENST00000473961 SPDYE3A6NKU9 549 aa6.66□□□□□ -1.34
BRCA1-212ENST00000473961 GPR182O15218 404 aa6.66□□□□□ -1.34
BRCA1-212ENST00000473961 ELNP15502 786 aa6.66□□□□□ -1.34
BRCA1-212ENST00000473961 PLA2G4AP47712 749 aa6.66□□□□□ -1.34
BRCA1-212ENST00000473961 MRPL58Q14197 206 aaKnown RBP6.66□□□□□ -1.34
BRCA1-212ENST00000473961 TMC4Q7Z404 712 aa6.66□□□□□ -1.34
BRCA1-212ENST00000473961 ATCAYQ86WG3 371 aa6.66□□□□□ -1.34
BRCA1-212ENST00000473961 ETFBKMTQ8IXQ9 262 aa6.66□□□□□ -1.34
BRCA1-212ENST00000473961 NIF3L1Q9GZT8 377 aa6.66□□□□□ -1.34
BRCA1-212ENST00000473961 KLK14Q9P0G3 267 aa6.66□□□□□ -1.34
BRCA1-212ENST00000473961 PARP2Q9UGN5 583 aa6.66□□□□□ -1.34
BRCA1-212ENST00000473961 PARP3Q9Y6F1 533 aa6.66□□□□□ -1.34
BRCA1-212ENST00000473961 SHROOM4Q9ULL8 1493 aa6.66□□□□□ -1.34
BRCA1-212ENST00000473961 PNMA6FA0A0J9YX94 578 aa6.65□□□□□ -1.34
BRCA1-212ENST00000473961 TGFBR3LH3BV60 316 aa6.65□□□□□ -1.34
BRCA1-212ENST00000473961 IGSF3O75054 1194 aa6.65□□□□□ -1.34
BRCA1-212ENST00000473961 EPB42P16452 691 aa6.65□□□□□ -1.34
BRCA1-212ENST00000473961 TAGLNQ01995 201 aaKnown RBP6.65□□□□□ -1.34
BRCA1-212ENST00000473961 SF3A1Q15459 793 aaKnown RBP6.65□□□□□ -1.34
BRCA1-212ENST00000473961 ENOX2Q16206 610 aaKnown RBP6.65□□□□□ -1.34
BRCA1-212ENST00000473961 C8orf34Q49A92 452 aa6.65□□□□□ -1.34
BRCA1-212ENST00000473961 SH3PXD2AQ5TCZ1 1133 aa6.65□□□□□ -1.34
BRCA1-212ENST00000473961 IER5Q5VY09 327 aa6.65□□□□□ -1.34
BRCA1-212ENST00000473961 AIDAQ96BJ3 306 aa6.65□□□□□ -1.34
BRCA1-212ENST00000473961 NACC1Q96RE7 527 aa6.65□□□□□ -1.34
BRCA1-212ENST00000473961 DUSP9Q99956 384 aaKnown RBP6.65□□□□□ -1.34
BRCA1-212ENST00000473961 DNAJC25Q9H1X3 360 aa6.65□□□□□ -1.34
BRCA1-212ENST00000473961 AVENQ9NQS1 362 aaPredicted RBP6.65□□□□□ -1.34
BRCA1-212ENST00000473961 VTI1BQ9UEU0 232 aa6.65□□□□□ -1.34
BRCA1-212ENST00000473961 ZBTB39O15060 712 aa6.64□□□□□ -1.35
BRCA1-212ENST00000473961 DAB2P98082 770 aa6.64□□□□□ -1.35
BRCA1-212ENST00000473961 LAMC2Q13753 1193 aa6.64□□□□□ -1.35
BRCA1-212ENST00000473961 BICDL1Q6ZP65 573 aa6.64□□□□□ -1.35
BRCA1-212ENST00000473961 ZNF295-AS1Q8N0V1 137 aa6.64□□□□□ -1.35
BRCA1-212ENST00000473961 TMEM87AQ8NBN3 555 aa6.64□□□□□ -1.35
BRCA1-212ENST00000473961 GPR152Q8TDT2 470 aa6.64□□□□□ -1.35
BRCA1-212ENST00000473961 NUDT16Q96DE0 195 aaKnown RBP6.64□□□□□ -1.35
BRCA1-212ENST00000473961 BACH2Q9BYV9 841 aa6.64□□□□□ -1.35
BRCA1-212ENST00000473961 CRISPLD1Q9H336 500 aa6.64□□□□□ -1.35
BRCA1-212ENST00000473961 METTL5Q9NRN9 209 aaKnown RBP6.64□□□□□ -1.35
BRCA1-212ENST00000473961 SPG7Q9UQ90 795 aa6.64□□□□□ -1.35
BRCA1-212ENST00000473961 ERCC5P28715 1186 aaPredicted RBP6.63□□□□□ -1.35
BRCA1-212ENST00000473961 GNA15P30679 374 aa6.63□□□□□ -1.35
BRCA1-212ENST00000473961 C4orf17Q53FE4 359 aa6.63□□□□□ -1.35
BRCA1-212ENST00000473961 CSRNP1Q96S65 589 aa6.63□□□□□ -1.35
BRCA1-212ENST00000473961 KRTAP17-1Q9BYP8 105 aa6.63□□□□□ -1.35
BRCA1-212ENST00000473961 KRTAP4-11Q9BYQ6 195 aa6.63□□□□□ -1.35
BRCA1-212ENST00000473961 CPNE3O75131 537 aaKnown RBP6.62□□□□□ -1.35
BRCA1-212ENST00000473961 MICAL2O94851 1124 aa6.62□□□□□ -1.35
BRCA1-212ENST00000473961 IGHA2P01877 340 aa6.62□□□□□ -1.35
BRCA1-212ENST00000473961 TXLNAP40222 546 aa6.62□□□□□ -1.35
BRCA1-212ENST00000473961 ARSDP51689 593 aa6.62□□□□□ -1.35
BRCA1-212ENST00000473961 COL9A3Q14050 684 aaPredicted RBP6.62□□□□□ -1.35
BRCA1-212ENST00000473961 GRIK4Q16099 956 aa6.62□□□□□ -1.35
BRCA1-212ENST00000473961 SREK1Q8WXA9 508 aaKnown RBP6.62□□□□□ -1.35
BRCA1-212ENST00000473961 GIPC1O14908 333 aa6.61□□□□□ -1.35
BRCA1-212ENST00000473961 ADGRE1Q14246 886 aa6.61□□□□□ -1.35
BRCA1-212ENST00000473961 FAM182BQ5T319 152 aa6.61□□□□□ -1.35
BRCA1-212ENST00000473961 SUSD3Q96L08 255 aa6.61□□□□□ -1.35
BRCA1-212ENST00000473961 DRC1Q96MC2 740 aa6.61□□□□□ -1.35
BRCA1-212ENST00000473961 RNF112Q9ULX5 631 aa6.61□□□□□ -1.35
BRCA1-212ENST00000473961 GJA3Q9Y6H8 435 aa6.61□□□□□ -1.35
BRCA1-212ENST00000473961 EIF1AYO14602 144 aaKnown RBP6.6□□□□□ -1.35
BRCA1-212ENST00000473961 IDH3AP50213 366 aa6.6□□□□□ -1.35
BRCA1-212ENST00000473961 PCBP4P57723 403 aaKnown RBP6.6□□□□□ -1.35
BRCA1-212ENST00000473961 MBTPS1Q14703 1052 aa6.6□□□□□ -1.35
BRCA1-212ENST00000473961 ARSJQ5FYB0 599 aaPredicted RBP6.6□□□□□ -1.35
BRCA1-212ENST00000473961 PDE12Q6L8Q7 609 aaKnown RBP6.6□□□□□ -1.35
BRCA1-212ENST00000473961 SNX29Q8TEQ0 813 aa6.6□□□□□ -1.35
BRCA1-212ENST00000473961 RNF34Q969K3 372 aa6.6□□□□□ -1.35
BRCA1-212ENST00000473961 CRELD1Q96HD1 420 aa6.6□□□□□ -1.35
BRCA1-212ENST00000473961 ZCCHC2Q9C0B9 1178 aaKnown RBP6.6□□□□□ -1.35
BRCA1-212ENST00000473961 PCDHGC4Q9Y5F7 938 aa6.6□□□□□ -1.35
BRCA1-212ENST00000473961 CD33P20138 364 aa6.59□□□□□ -1.35
BRCA1-212ENST00000473961 EIF4BP23588 611 aaKnown RBP6.59□□□□□ -1.35
BRCA1-212ENST00000473961 GNL2Q13823 731 aaKnown RBP6.59□□□□□ -1.35
BRCA1-212ENST00000473961 FAM26DQ5JW98 314 aa6.59□□□□□ -1.35
BRCA1-212ENST00000473961 FIGNL1Q6PIW4 674 aa6.59□□□□□ -1.35
BRCA1-212ENST00000473961 ZNF438Q7Z4V0 828 aa6.59□□□□□ -1.35
BRCA1-212ENST00000473961 MDFIQ99750 246 aa6.59□□□□□ -1.35
BRCA1-212ENST00000473961 NLRP2Q9NX02 1062 aa6.59□□□□□ -1.35
BRCA1-212ENST00000473961 ZNF76P36508 570 aa6.58□□□□□ -1.36
BRCA1-212ENST00000473961 NAALADL2Q58DX5 795 aa6.58□□□□□ -1.36
BRCA1-212ENST00000473961 ZNF468Q5VIY5 522 aaPredicted RBP6.58□□□□□ -1.36
BRCA1-212ENST00000473961 XKR5Q6UX68 686 aa6.58□□□□□ -1.36
BRCA1-212ENST00000473961 BTLAQ7Z6A9 289 aa6.58□□□□□ -1.36
BRCA1-212ENST00000473961 PMEPA1Q969W9 287 aa6.58□□□□□ -1.36
BRCA1-212ENST00000473961 FAM161BQ96MY7 647 aa6.58□□□□□ -1.36
BRCA1-212ENST00000473961 SRCIN1Q9C0H9 1055 aa6.58□□□□□ -1.36
BRCA1-212ENST00000473961 C11orf16Q9NQ32 467 aa6.58□□□□□ -1.36
BRCA1-212ENST00000473961 WWC3Q9ULE0 1092 aa6.58□□□□□ -1.36
BRCA1-212ENST00000473961 AK5Q9Y6K8 562 aa6.58□□□□□ -1.36
BRCA1-212ENST00000473961 ELOA3CA0A087WX78 387 aaPredicted RBP6.57□□□□□ -1.36
BRCA1-212ENST00000473961 DCDC2BA2VCK2 349 aa6.57□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 12.4 ms