RNA–Protein interactions for RNA: ENST00000473869.5

TARDBP-206, Transcript of TAR DNA binding protein, humanhuman

TSL 5

Gene TARDBP, Length 1,946 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TARDBP-206ENST00000473869 SEC31BQ9NQW1 1179 aa13.21□□□□□ -0.3
TARDBP-206ENST00000473869 REC8O95072 547 aa13.2□□□□□ -0.3
TARDBP-206ENST00000473869 CHMLP26374 656 aa13.2□□□□□ -0.3
TARDBP-206ENST00000473869 GORABQ5T7V8 394 aa13.2□□□□□ -0.3
TARDBP-206ENST00000473869 DDRGK1Q96HY6 314 aa13.2□□□□□ -0.3
TARDBP-206ENST00000473869 STK32BQ9NY57 414 aa13.2□□□□□ -0.3
TARDBP-206ENST00000473869 MROH5Q6ZUA9 1318 aa13.2□□□□□ -0.3
TARDBP-206ENST00000473869 ABCC12Q96J65 1359 aa13.2□□□□□ -0.3
TARDBP-206ENST00000473869 CNBD1Q8NA66 436 aa13.19□□□□□ -0.3
TARDBP-206ENST00000473869 IPO9Q96P70 1041 aaKnown RBP13.19□□□□□ -0.3
TARDBP-206ENST00000473869 SLC15A2Q16348 729 aa13.19□□□□□ -0.3
TARDBP-206ENST00000473869 ATP2B3Q16720 1220 aa13.19□□□□□ -0.3
TARDBP-206ENST00000473869 RIC1Q4ADV7 1423 aa13.19□□□□□ -0.3
TARDBP-206ENST00000473869 LRP5O75197 1615 aa13.18□□□□□ -0.3
TARDBP-206ENST00000473869 PDE8BO95263 885 aa13.18□□□□□ -0.3
TARDBP-206ENST00000473869 CCDC158Q5M9N0 1113 aa13.18□□□□□ -0.3
TARDBP-206ENST00000473869 C3orf67Q6ZVT6 689 aa13.18□□□□□ -0.3
TARDBP-206ENST00000473869 ANKRD18AQ8IVF6 992 aa13.18□□□□□ -0.3
TARDBP-206ENST00000473869 ESYT1Q9BSJ8 1104 aa13.18□□□□□ -0.3
TARDBP-206ENST00000473869 PNPLA7Q6ZV29 1317 aa13.18□□□□□ -0.3
TARDBP-206ENST00000473869 CASZ1Q86V15 1759 aa13.17□□□□□ -0.3
TARDBP-206ENST00000473869 COL23A1Q86Y22 540 aaPredicted RBP13.17□□□□□ -0.3
TARDBP-206ENST00000473869 CCDC24Q8N4L8 307 aa13.17□□□□□ -0.3
TARDBP-206ENST00000473869 VGLL2Q8N8G2 317 aa13.17□□□□□ -0.3
TARDBP-206ENST00000473869 XAGE2Q96GT9 111 aa13.17□□□□□ -0.3
TARDBP-206ENST00000473869 DIAPH3Q9NSV4 1193 aa13.17□□□□□ -0.3
TARDBP-206ENST00000473869 SPEF2Q9C093 1822 aa13.17□□□□□ -0.3
TARDBP-206ENST00000473869 HIP1O00291 1037 aa13.17□□□□□ -0.3
TARDBP-206ENST00000473869 SERPINB2P05120 415 aa13.17□□□□□ -0.3
TARDBP-206ENST00000473869 TM4SF1P30408 202 aa13.17□□□□□ -0.3
TARDBP-206ENST00000473869 RBM25P49756 843 aaKnown RBP13.17□□□□□ -0.3
TARDBP-206ENST00000473869 ST5P78524 1137 aa13.17□□□□□ -0.3
TARDBP-206ENST00000473869 PUM3Q15397 648 aaKnown RBP13.17□□□□□ -0.3
TARDBP-206ENST00000473869 RUFY2Q8WXA3 655 aa13.17□□□□□ -0.3
TARDBP-206ENST00000473869 DNAJC2Q99543 621 aaKnown RBP13.17□□□□□ -0.3
TARDBP-206ENST00000473869 HAUS7Q99871 368 aa13.17□□□□□ -0.3
TARDBP-206ENST00000473869 TTC39AQ5SRH9 613 aa13.16□□□□□ -0.3
TARDBP-206ENST00000473869 NLGN1Q8N2Q7 840 aa13.16□□□□□ -0.3
TARDBP-206ENST00000473869 FSD1Q9BTV5 496 aa13.16□□□□□ -0.3
TARDBP-206ENST00000473869 IFIT1P09914 478 aaKnown RBP13.15□□□□□ -0.3
TARDBP-206ENST00000473869 ADORA1P30542 326 aa13.15□□□□□ -0.3
TARDBP-206ENST00000473869 PRR5LQ6MZQ0 368 aa13.15□□□□□ -0.3
TARDBP-206ENST00000473869 DDX46Q7L014 1031 aaKnown RBP13.15□□□□□ -0.3
TARDBP-206ENST00000473869 HELBQ8NG08 1087 aaPredicted RBP13.15□□□□□ -0.3
TARDBP-206ENST00000473869 PPIL4Q8WUA2 492 aaKnown RBP eCLIP13.15□□□□□ -0.3
TARDBP-206ENST00000473869 LPIN2Q92539 896 aa13.15□□□□□ -0.3
TARDBP-206ENST00000473869 USP26Q9BXU7 913 aa13.15□□□□□ -0.3
TARDBP-206ENST00000473869 BSDC1Q9NW68 430 aaPredicted RBP13.15□□□□□ -0.3
TARDBP-206ENST00000473869 SLC5A1P13866 664 aa13.15□□□□□ -0.3
TARDBP-206ENST00000473869 DAXXQ9UER7 740 aaPredicted RBP13.15□□□□□ -0.3
TARDBP-206ENST00000473869 RPS8P62241 208 aaKnown RBP13.14□□□□□ -0.31
TARDBP-206ENST00000473869 CHRNDQ07001 517 aa13.14□□□□□ -0.31
TARDBP-206ENST00000473869 CWC27Q6UX04 472 aaKnown RBP13.14□□□□□ -0.31
TARDBP-206ENST00000473869 ANO2Q9NQ90 1003 aa13.14□□□□□ -0.31
TARDBP-206ENST00000473869 TAF1P21675 1872 aa13.14□□□□□ -0.31
TARDBP-206ENST00000473869 POLRMTO00411 1230 aaKnown RBP13.13□□□□□ -0.31
TARDBP-206ENST00000473869 TAF5LO75529 589 aa13.13□□□□□ -0.31
TARDBP-206ENST00000473869 DDR1Q08345 913 aa13.13□□□□□ -0.31
TARDBP-206ENST00000473869 MSL1Q68DK7 614 aa13.13□□□□□ -0.31
TARDBP-206ENST00000473869 CELF1Q92879 486 aaKnown RBP13.13□□□□□ -0.31
TARDBP-206ENST00000473869 PAG1Q9NWQ8 432 aa13.13□□□□□ -0.31
TARDBP-206ENST00000473869 SGSM2O43147 1006 aa13.13□□□□□ -0.31
TARDBP-206ENST00000473869 FGFR2P21802 821 aa13.13□□□□□ -0.31
TARDBP-206ENST00000473869 KIAA1211Q6ZU35 1233 aa13.13□□□□□ -0.31
TARDBP-206ENST00000473869 EDC3Q96F86 508 aaKnown RBP13.13□□□□□ -0.31
TARDBP-206ENST00000473869 PDGFDQ9GZP0 370 aaPredicted RBP13.13□□□□□ -0.31
TARDBP-206ENST00000473869 NDUFB9Q9Y6M9 179 aa13.13□□□□□ -0.31
TARDBP-206ENST00000473869 TNRC6CQ9HCJ0 1690 aaKnown RBP13.12□□□□□ -0.31
TARDBP-206ENST00000473869 GOLIM4O00461 696 aa13.12□□□□□ -0.31
TARDBP-206ENST00000473869 FKBP4Q02790 459 aaKnown RBP eCLIP13.12□□□□□ -0.31
TARDBP-206ENST00000473869 RPGRQ92834 1020 aaKnown RBP13.12□□□□□ -0.31
TARDBP-206ENST00000473869 QSER1Q2KHR3 1735 aa13.12□□□□□ -0.31
TARDBP-206ENST00000473869 EPB41L2O43491 1005 aaKnown RBP13.11□□□□□ -0.31
TARDBP-206ENST00000473869 UQCRFS1P1P0C7P4 283 aa13.11□□□□□ -0.31
TARDBP-206ENST00000473869 MCCP23508 829 aa13.11□□□□□ -0.31
TARDBP-206ENST00000473869 BECN1Q14457 450 aa13.11□□□□□ -0.31
TARDBP-206ENST00000473869 TICAM2Q86XR7 235 aa13.11□□□□□ -0.31
TARDBP-206ENST00000473869 KBTBD3Q8NAB2 608 aa13.11□□□□□ -0.31
TARDBP-206ENST00000473869 ZNF512BQ96KM6 892 aaPredicted RBP13.11□□□□□ -0.31
TARDBP-206ENST00000473869 MINPP1Q9UNW1 487 aa13.11□□□□□ -0.31
TARDBP-206ENST00000473869 RFX7Q2KHR2 1363 aa13.11□□□□□ -0.31
TARDBP-206ENST00000473869 COL4A1P02462 1669 aa13.11□□□□□ -0.31
TARDBP-206ENST00000473869 NMIQ13287 307 aaPredicted RBP13.11□□□□□ -0.31
TARDBP-206ENST00000473869 LRRFIP1Q32MZ4 808 aaKnown RBP13.11□□□□□ -0.31
TARDBP-206ENST00000473869 CCDC102BQ68D86 513 aa13.11□□□□□ -0.31
TARDBP-206ENST00000473869 ARAP2Q8WZ64 1704 aa13.11□□□□□ -0.31
TARDBP-206ENST00000473869 RAD50Q92878 1312 aa13.1□□□□□ -0.31
TARDBP-206ENST00000473869 GRAPQ13588 217 aa13.1□□□□□ -0.31
TARDBP-206ENST00000473869 UBE4AQ14139 1066 aa13.1□□□□□ -0.31
TARDBP-206ENST00000473869 GRAPLQ8TC17 118 aaPredicted RBP13.1□□□□□ -0.31
TARDBP-206ENST00000473869 ANKRD2Q9GZV1 360 aa13.1□□□□□ -0.31
TARDBP-206ENST00000473869 IL25Q9H293 177 aa13.1□□□□□ -0.31
TARDBP-206ENST00000473869 SNRKQ9NRH2 765 aa13.1□□□□□ -0.31
TARDBP-206ENST00000473869 PARP3Q9Y6F1 533 aa13.1□□□□□ -0.31
TARDBP-206ENST00000473869 SNAP23O00161 211 aa13.09□□□□□ -0.31
TARDBP-206ENST00000473869 MMP10P09238 476 aa13.09□□□□□ -0.31
TARDBP-206ENST00000473869 PHKA1P46020 1223 aa13.09□□□□□ -0.31
TARDBP-206ENST00000473869 R3HDM1Q15032 1099 aaKnown RBP13.09□□□□□ -0.31
TARDBP-206ENST00000473869 CRY2Q49AN0 593 aa13.09□□□□□ -0.31
TARDBP-206ENST00000473869 RBM17Q96I25 401 aaKnown RBP13.09□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms