RNA–Protein interactions for RNA: ENST00000473778.5

C9orf3-214, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 2

Gene C9orf3, Length 2,396 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-214ENST00000473778 PROSER2Q86WR7 435 aaPredicted RBP12.98□□□□□ -0.33
C9orf3-214ENST00000473778 IFNL2Q8IZJ0 200 aa12.98□□□□□ -0.33
C9orf3-214ENST00000473778 NEK1Q96PY6 1258 aa12.98□□□□□ -0.33
C9orf3-214ENST00000473778 KIF1AQ12756 1690 aa12.97□□□□□ -0.33
C9orf3-214ENST00000473778 NBPF26B4DH59 902 aa12.97□□□□□ -0.33
C9orf3-214ENST00000473778 CCDC192P0DO97 292 aa12.97□□□□□ -0.33
C9orf3-214ENST00000473778 TATP17735 454 aaPredicted RBP12.97□□□□□ -0.33
C9orf3-214ENST00000473778 TYRO3Q06418 890 aa12.97□□□□□ -0.33
C9orf3-214ENST00000473778 SCRN1Q12765 414 aa12.97□□□□□ -0.33
C9orf3-214ENST00000473778 NBPF14Q5TI25 921 aa12.97□□□□□ -0.33
C9orf3-214ENST00000473778 NBPF10Q6P3W6 841 aaKnown RBP12.97□□□□□ -0.33
C9orf3-214ENST00000473778 NBPF15Q8N660 670 aa12.97□□□□□ -0.33
C9orf3-214ENST00000473778 BRF1Q92994 677 aa12.97□□□□□ -0.33
C9orf3-214ENST00000473778 HAUS7Q99871 368 aa12.97□□□□□ -0.33
C9orf3-214ENST00000473778 NUP62CLQ9H1M0 184 aa12.97□□□□□ -0.33
C9orf3-214ENST00000473778 PPFIA3O75145 1194 aa12.96□□□□□ -0.33
C9orf3-214ENST00000473778 PDCP20941 246 aa12.96□□□□□ -0.33
C9orf3-214ENST00000473778 FOXO4P98177 505 aa12.96□□□□□ -0.33
C9orf3-214ENST00000473778 MAP3K11Q16584 847 aa12.96□□□□□ -0.33
C9orf3-214ENST00000473778 LMBR1LQ6UX01 489 aa12.96□□□□□ -0.33
C9orf3-214ENST00000473778 ATG9AQ7Z3C6 839 aa12.96□□□□□ -0.33
C9orf3-214ENST00000473778 SPATA32Q96LK8 384 aa12.96□□□□□ -0.33
C9orf3-214ENST00000473778 MAP7D2Q96T17 732 aa12.96□□□□□ -0.33
C9orf3-214ENST00000473778 FTOQ9C0B1 505 aaKnown RBP eCLIP12.96□□□□□ -0.33
C9orf3-214ENST00000473778 SPTLC3Q9NUV7 552 aa12.96□□□□□ -0.33
C9orf3-214ENST00000473778 PKD1L3Q7Z443 1732 aa12.96□□□□□ -0.33
C9orf3-214ENST00000473778 TJP1Q07157 1748 aa12.96□□□□□ -0.33
C9orf3-214ENST00000473778 RESTQ13127 1097 aa12.96□□□□□ -0.33
C9orf3-214ENST00000473778 FAM200AQ8TCP9 573 aa12.96□□□□□ -0.33
C9orf3-214ENST00000473778 MYH15Q9Y2K3 1946 aa12.96□□□□□ -0.34
C9orf3-214ENST00000473778 DYNC1I1O14576 645 aa12.95□□□□□ -0.34
C9orf3-214ENST00000473778 TIMM10P62072 90 aa12.95□□□□□ -0.34
C9orf3-214ENST00000473778 RBM43Q6ZSC3 357 aaKnown RBP12.95□□□□□ -0.34
C9orf3-214ENST00000473778 TTC5Q8N0Z6 440 aa12.95□□□□□ -0.34
C9orf3-214ENST00000473778 LAMB4A4D0S4 1761 aa12.95□□□□□ -0.34
C9orf3-214ENST00000473778 FAM177BA6PVY3 158 aa12.95□□□□□ -0.34
C9orf3-214ENST00000473778 CTDNEP1O95476 244 aa12.95□□□□□ -0.34
C9orf3-214ENST00000473778 MCMDC2Q4G0Z9 681 aa12.95□□□□□ -0.34
C9orf3-214ENST00000473778 ANO6Q4KMQ2 910 aa12.95□□□□□ -0.34
C9orf3-214ENST00000473778 DNTTIP2Q5QJE6 756 aaKnown RBP12.95□□□□□ -0.34
C9orf3-214ENST00000473778 TTLL7Q6ZT98 887 aa12.95□□□□□ -0.34
C9orf3-214ENST00000473778 MYRIPQ8NFW9 859 aa12.95□□□□□ -0.34
C9orf3-214ENST00000473778 KIAA1524Q8TCG1 905 aa12.95□□□□□ -0.34
C9orf3-214ENST00000473778 DCAF5Q96JK2 942 aa12.95□□□□□ -0.34
C9orf3-214ENST00000473778 FMNL2Q96PY5 1086 aa12.95□□□□□ -0.34
C9orf3-214ENST00000473778 SCAND2PQ9GZW5 306 aaPredicted RBP12.95□□□□□ -0.34
C9orf3-214ENST00000473778 TNMDQ9H2S6 317 aa12.95□□□□□ -0.34
C9orf3-214ENST00000473778 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP12.95□□□□□ -0.34
C9orf3-214ENST00000473778 ADD1P35611 737 aaKnown RBP12.94□□□□□ -0.34
C9orf3-214ENST00000473778 KBTBD3Q8NAB2 608 aa12.94□□□□□ -0.34
C9orf3-214ENST00000473778 ARID3AQ99856 593 aa12.94□□□□□ -0.34
C9orf3-214ENST00000473778 C19orf44Q9H6X5 657 aa12.94□□□□□ -0.34
C9orf3-214ENST00000473778 CBX8Q9HC52 389 aa12.94□□□□□ -0.34
C9orf3-214ENST00000473778 NUP188Q5SRE5 1749 aa12.94□□□□□ -0.34
C9orf3-214ENST00000473778 GOLIM4O00461 696 aa12.94□□□□□ -0.34
C9orf3-214ENST00000473778 CSB-PGBD3P0DP91 1061 aa12.94□□□□□ -0.34
C9orf3-214ENST00000473778 FOSBP53539 338 aa12.94□□□□□ -0.34
C9orf3-214ENST00000473778 SMAP1Q8IYB5 467 aaPredicted RBP12.94□□□□□ -0.34
C9orf3-214ENST00000473778 CEBPZQ03701 1054 aaKnown RBP12.93□□□□□ -0.34
C9orf3-214ENST00000473778 KRT32Q14532 448 aa12.93□□□□□ -0.34
C9orf3-214ENST00000473778 LRRC24Q50LG9 513 aa12.93□□□□□ -0.34
C9orf3-214ENST00000473778 ZNF710Q8N1W2 664 aa12.93□□□□□ -0.34
C9orf3-214ENST00000473778 PLBD2Q8NHP8 589 aa12.93□□□□□ -0.34
C9orf3-214ENST00000473778 ZNF594Q96JF6 807 aaPredicted RBP12.93□□□□□ -0.34
C9orf3-214ENST00000473778 NRBP1Q9UHY1 535 aa12.93□□□□□ -0.34
C9orf3-214ENST00000473778 RFX7Q2KHR2 1363 aa12.93□□□□□ -0.34
C9orf3-214ENST00000473778 H7C1W4 665 aa12.93□□□□□ -0.34
C9orf3-214ENST00000473778 HSP90B1P14625 803 aaKnown RBP12.93□□□□□ -0.34
C9orf3-214ENST00000473778 PTGS1P23219 599 aa12.93□□□□□ -0.34
C9orf3-214ENST00000473778 NSUN7Q8NE18 718 aaKnown RBP12.93□□□□□ -0.34
C9orf3-214ENST00000473778 SMARCC2Q8TAQ2 1214 aa12.93□□□□□ -0.34
C9orf3-214ENST00000473778 CLSTN2Q9H4D0 955 aa12.93□□□□□ -0.34
C9orf3-214ENST00000473778 NCOA5Q9HCD5 579 aaKnown RBP12.93□□□□□ -0.34
C9orf3-214ENST00000473778 STRCP1A6NGW2 1772 aa12.93□□□□□ -0.34
C9orf3-214ENST00000473778 SH3TC1Q8TE82 1336 aa12.92□□□□□ -0.34
C9orf3-214ENST00000473778 APOBRQ0VD83 1088 aa12.92□□□□□ -0.34
C9orf3-214ENST00000473778 CHST3Q7LGC8 479 aa12.92□□□□□ -0.34
C9orf3-214ENST00000473778 KLHL34Q8N239 644 aa12.92□□□□□ -0.34
C9orf3-214ENST00000473778 NEUROD6Q96NK8 337 aa12.92□□□□□ -0.34
C9orf3-214ENST00000473778 PALLDQ8WX93 1383 aa12.92□□□□□ -0.34
C9orf3-214ENST00000473778 A0A087WWV3 80 aa12.92□□□□□ -0.34
C9orf3-214ENST00000473778 CABP4P57796 275 aa12.92□□□□□ -0.34
C9orf3-214ENST00000473778 LRMPQ12912 555 aa12.92□□□□□ -0.34
C9orf3-214ENST00000473778 DNAJC25Q9H1X3 360 aa12.92□□□□□ -0.34
C9orf3-214ENST00000473778 PAG1Q9NWQ8 432 aa12.92□□□□□ -0.34
C9orf3-214ENST00000473778 ABCC6O95255 1503 aa12.91□□□□□ -0.34
C9orf3-214ENST00000473778 NWD2Q9ULI1 1742 aa12.91□□□□□ -0.34
C9orf3-214ENST00000473778 A1BGP04217 495 aa12.91□□□□□ -0.34
C9orf3-214ENST00000473778 PDIA4P13667 645 aaKnown RBP12.91□□□□□ -0.34
C9orf3-214ENST00000473778 CCT2P78371 535 aaKnown RBP12.91□□□□□ -0.34
C9orf3-214ENST00000473778 BICD2Q8TD16 824 aa12.91□□□□□ -0.34
C9orf3-214ENST00000473778 PUS3Q9BZE2 481 aaKnown RBP12.91□□□□□ -0.34
C9orf3-214ENST00000473778 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP12.91□□□□□ -0.34
C9orf3-214ENST00000473778 GOLGA6L4A6NEF3 574 aa12.91□□□□□ -0.34
C9orf3-214ENST00000473778 FOXP2O15409 715 aa12.91□□□□□ -0.34
C9orf3-214ENST00000473778 PFKFB2O60825 505 aa12.91□□□□□ -0.34
C9orf3-214ENST00000473778 HSPD1P10809 573 aaKnown RBP12.91□□□□□ -0.34
C9orf3-214ENST00000473778 EXOSC10Q01780 885 aaKnown RBP12.91□□□□□ -0.34
C9orf3-214ENST00000473778 TTLL5Q6EMB2 1281 aa12.91□□□□□ -0.34
C9orf3-214ENST00000473778 ILDR1Q86SU0 546 aaPredicted RBP12.91□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 13 ms