RNA–Protein interactions for RNA: ENST00000473099.1

VPS13D-205, Transcript of vacuolar protein sorting 13 homolog D, humanhuman

TSL 2

Gene VPS13D, Length 461 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13D-205ENST00000473099 TM4SF1P30408 202 aa15.64■□□□□ 0.09
VPS13D-205ENST00000473099 ST5P78524 1137 aa15.64■□□□□ 0.09
VPS13D-205ENST00000473099 METTL24Q5JXM2 366 aa15.64■□□□□ 0.09
VPS13D-205ENST00000473099 PUS3Q9BZE2 481 aaKnown RBP15.64■□□□□ 0.09
VPS13D-205ENST00000473099 CCDC8Q9H0W5 538 aaPredicted RBP15.64■□□□□ 0.09
VPS13D-205ENST00000473099 R3HDM1Q15032 1099 aaKnown RBP15.63■□□□□ 0.09
VPS13D-205ENST00000473099 TICAM2Q86XR7 235 aa15.63■□□□□ 0.09
VPS13D-205ENST00000473099 STK32BQ9NY57 414 aa15.63■□□□□ 0.09
VPS13D-205ENST00000473099 A0A1B0GUL7 405 aa15.62■□□□□ 0.09
VPS13D-205ENST00000473099 TSHZ3Q63HK5 1081 aa15.62■□□□□ 0.09
VPS13D-205ENST00000473099 ANKRD18AQ8IVF6 992 aa15.62■□□□□ 0.09
VPS13D-205ENST00000473099 PPIL4Q8WUA2 492 aaKnown RBP eCLIP15.62■□□□□ 0.09
VPS13D-205ENST00000473099 RILPL2Q969X0 211 aa15.62■□□□□ 0.09
VPS13D-205ENST00000473099 EVI5LQ96CN4 794 aa15.62■□□□□ 0.09
VPS13D-205ENST00000473099 DBNLQ9UJU6 430 aaKnown RBP15.62■□□□□ 0.09
VPS13D-205ENST00000473099 HIP1O00291 1037 aa15.61■□□□□ 0.09
VPS13D-205ENST00000473099 PDE8BO95263 885 aa15.61■□□□□ 0.09
VPS13D-205ENST00000473099 SERPINB2P05120 415 aa15.61■□□□□ 0.09
VPS13D-205ENST00000473099 SLC15A2Q16348 729 aa15.61■□□□□ 0.09
VPS13D-205ENST00000473099 ATP2B3Q16720 1220 aa15.61■□□□□ 0.09
VPS13D-205ENST00000473099 COL23A1Q86Y22 540 aaPredicted RBP15.61■□□□□ 0.09
VPS13D-205ENST00000473099 NEUROD6Q96NK8 337 aa15.61■□□□□ 0.09
VPS13D-205ENST00000473099 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP15.61■□□□□ 0.09
VPS13D-205ENST00000473099 PNPLA7Q6ZV29 1317 aa15.61■□□□□ 0.09
VPS13D-205ENST00000473099 RFX7Q2KHR2 1363 aa15.61■□□□□ 0.09
VPS13D-205ENST00000473099 MSH5O43196 834 aa15.6■□□□□ 0.09
VPS13D-205ENST00000473099 REC8O95072 547 aa15.6■□□□□ 0.09
VPS13D-205ENST00000473099 PUM3Q15397 648 aaKnown RBP15.6■□□□□ 0.09
VPS13D-205ENST00000473099 CCDC158Q5M9N0 1113 aa15.6■□□□□ 0.09
VPS13D-205ENST00000473099 PRR5LQ6MZQ0 368 aa15.6■□□□□ 0.09
VPS13D-205ENST00000473099 DDX46Q7L014 1031 aaKnown RBP15.6■□□□□ 0.09
VPS13D-205ENST00000473099 VGLL2Q8N8G2 317 aa15.6■□□□□ 0.09
VPS13D-205ENST00000473099 DBNDD2Q9BQY9 259 aa15.6■□□□□ 0.09
VPS13D-205ENST00000473099 SEC31BQ9NQW1 1179 aa15.6■□□□□ 0.09
VPS13D-205ENST00000473099 BSDC1Q9NW68 430 aaPredicted RBP15.6■□□□□ 0.09
VPS13D-205ENST00000473099 TLR7Q9NYK1 1049 aaKnown RBP15.6■□□□□ 0.09
VPS13D-205ENST00000473099 CACNA1SQ13698 1873 aa15.59■□□□□ 0.09
VPS13D-205ENST00000473099 POLRMTO00411 1230 aaKnown RBP15.59■□□□□ 0.09
VPS13D-205ENST00000473099 EPB41L2O43491 1005 aaKnown RBP15.59■□□□□ 0.09
VPS13D-205ENST00000473099 SEC24BO95487 1268 aa15.59■□□□□ 0.09
VPS13D-205ENST00000473099 MFAP1P55081 439 aaKnown RBP15.59■□□□□ 0.09
VPS13D-205ENST00000473099 GORABQ5T7V8 394 aa15.59■□□□□ 0.09
VPS13D-205ENST00000473099 RUFY2Q8WXA3 655 aa15.59■□□□□ 0.09
VPS13D-205ENST00000473099 LPIN2Q92539 896 aa15.59■□□□□ 0.09
VPS13D-205ENST00000473099 DOCK2Q92608 1830 aa15.59■□□□□ 0.09
VPS13D-205ENST00000473099 MYO5AQ9Y4I1 1855 aaKnown RBP15.59■□□□□ 0.09
VPS13D-205ENST00000473099 LRRC37AA6NMS7 1700 aa15.58■□□□□ 0.08
VPS13D-205ENST00000473099 SLC5A1P13866 664 aa15.58■□□□□ 0.08
VPS13D-205ENST00000473099 CHMLP26374 656 aa15.58■□□□□ 0.08
VPS13D-205ENST00000473099 TIMM10P62072 90 aa15.58■□□□□ 0.08
VPS13D-205ENST00000473099 DDRGK1Q96HY6 314 aa15.58■□□□□ 0.08
VPS13D-205ENST00000473099 ZNF512BQ96KM6 892 aaPredicted RBP15.58■□□□□ 0.08
VPS13D-205ENST00000473099 TBC1D32Q96NH3 1257 aa15.58■□□□□ 0.08
VPS13D-205ENST00000473099 HAUS7Q99871 368 aa15.58■□□□□ 0.08
VPS13D-205ENST00000473099 IFIT1P09914 478 aaKnown RBP15.57■□□□□ 0.08
VPS13D-205ENST00000473099 RPS8P62241 208 aaKnown RBP15.57■□□□□ 0.08
VPS13D-205ENST00000473099 XAGE2Q96GT9 111 aa15.57■□□□□ 0.08
VPS13D-205ENST00000473099 C22orf23Q9BZE7 217 aa15.57■□□□□ 0.08
VPS13D-205ENST00000473099 BOLA2Q9H3K6 86 aa15.57■□□□□ 0.08
VPS13D-205ENST00000473099 PARP3Q9Y6F1 533 aa15.57■□□□□ 0.08
VPS13D-205ENST00000473099 CCDC88AQ3V6T2 1871 aa15.57■□□□□ 0.08
VPS13D-205ENST00000473099 FGFR2P21802 821 aa15.56■□□□□ 0.08
VPS13D-205ENST00000473099 DDR1Q08345 913 aa15.56■□□□□ 0.08
VPS13D-205ENST00000473099 LRRFIP1Q32MZ4 808 aaKnown RBP15.56■□□□□ 0.08
VPS13D-205ENST00000473099 CRY2Q49AN0 593 aa15.56■□□□□ 0.08
VPS13D-205ENST00000473099 TTC39AQ5SRH9 613 aa15.56■□□□□ 0.08
VPS13D-205ENST00000473099 C3orf67Q6ZVT6 689 aa15.56■□□□□ 0.08
VPS13D-205ENST00000473099 RPGRQ92834 1020 aaKnown RBP15.56■□□□□ 0.08
VPS13D-205ENST00000473099 ESYT1Q9BSJ8 1104 aa15.56■□□□□ 0.08
VPS13D-205ENST00000473099 ANKRD2Q9GZV1 360 aa15.56■□□□□ 0.08
VPS13D-205ENST00000473099 DIAPH3Q9NSV4 1193 aa15.56■□□□□ 0.08
VPS13D-205ENST00000473099 COL4A1P02462 1669 aa15.56■□□□□ 0.08
VPS13D-205ENST00000473099 COL11A2P13942 1736 aaPredicted RBP15.55■□□□□ 0.08
VPS13D-205ENST00000473099 RAD50Q92878 1312 aa15.55■□□□□ 0.08
VPS13D-205ENST00000473099 UQCRFS1P1P0C7P4 283 aa15.55■□□□□ 0.08
VPS13D-205ENST00000473099 RBM25P49756 843 aaKnown RBP15.55■□□□□ 0.08
VPS13D-205ENST00000473099 CHRNDQ07001 517 aa15.55■□□□□ 0.08
VPS13D-205ENST00000473099 GRAPQ13588 217 aa15.55■□□□□ 0.08
VPS13D-205ENST00000473099 UBE4AQ14139 1066 aa15.55■□□□□ 0.08
VPS13D-205ENST00000473099 GRAPLQ8TC17 118 aaPredicted RBP15.55■□□□□ 0.08
VPS13D-205ENST00000473099 RBM17Q96I25 401 aaKnown RBP15.55■□□□□ 0.08
VPS13D-205ENST00000473099 ANO8Q9HCE9 1232 aaPredicted RBP15.55■□□□□ 0.08
VPS13D-205ENST00000473099 DLEC1Q9Y238 1755 aa15.54■□□□□ 0.08
VPS13D-205ENST00000473099 KLRG2A4D1S0 409 aaPredicted RBP15.54■□□□□ 0.08
VPS13D-205ENST00000473099 MAP4K4O95819 1239 aaPredicted RBP15.54■□□□□ 0.08
VPS13D-205ENST00000473099 TMC4Q7Z404 712 aa15.54■□□□□ 0.08
VPS13D-205ENST00000473099 FSD1Q9BTV5 496 aa15.54■□□□□ 0.08
VPS13D-205ENST00000473099 BRIP1Q9BX63 1249 aa15.54■□□□□ 0.08
VPS13D-205ENST00000473099 HOXA10P31260 410 aaPredicted RBP15.53■□□□□ 0.08
VPS13D-205ENST00000473099 KBTBD3Q8NAB2 608 aa15.53■□□□□ 0.08
VPS13D-205ENST00000473099 SLC16A10Q8TF71 515 aa15.53■□□□□ 0.08
VPS13D-205ENST00000473099 CELF1Q92879 486 aaKnown RBP15.53■□□□□ 0.08
VPS13D-205ENST00000473099 CRAMP1Q96RY5 1269 aa15.53■□□□□ 0.08
VPS13D-205ENST00000473099 PAG1Q9NWQ8 432 aa15.53■□□□□ 0.08
VPS13D-205ENST00000473099 MINPP1Q9UNW1 487 aa15.53■□□□□ 0.08
VPS13D-205ENST00000473099 KIF13BQ9NQT8 1826 aa15.52■□□□□ 0.08
VPS13D-205ENST00000473099 MMP10P09238 476 aa15.52■□□□□ 0.08
VPS13D-205ENST00000473099 MCCP23508 829 aa15.52■□□□□ 0.08
VPS13D-205ENST00000473099 ARID4AP29374 1257 aaPredicted RBP15.52■□□□□ 0.08
VPS13D-205ENST00000473099 ADORA1P30542 326 aa15.52■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 10.5 ms