RNA–Protein interactions for RNA: ENST00000471779.1

DMD-219, Transcript of dystrophin, humanhuman

TSL 1 (best)

Gene DMD, Length 362 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DMD-219ENST00000471779 PRPF38BQ5VTL8 546 aaKnown RBP3.76□□□□□ -1.81
DMD-219ENST00000471779 ARHGEF25Q86VW2 580 aa3.76□□□□□ -1.81
DMD-219ENST00000471779 EDARADDQ8WWZ3 215 aa3.76□□□□□ -1.81
DMD-219ENST00000471779 IP6K1Q92551 441 aa3.76□□□□□ -1.81
DMD-219ENST00000471779 POM121Q96HA1 1249 aa3.76□□□□□ -1.81
DMD-219ENST00000471779 GJD4Q96KN9 370 aaPredicted RBP3.76□□□□□ -1.81
DMD-219ENST00000471779 TRERF1Q96PN7 1200 aa3.76□□□□□ -1.81
DMD-219ENST00000471779 ZNF395Q9H8N7 513 aaPredicted RBP3.76□□□□□ -1.81
DMD-219ENST00000471779 PGPEP1Q9NXJ5 209 aa3.76□□□□□ -1.81
DMD-219ENST00000471779 USP35Q9P2H5 1018 aa3.76□□□□□ -1.81
DMD-219ENST00000471779 PCDHGC3Q9UN70 934 aa3.76□□□□□ -1.81
DMD-219ENST00000471779 XIRP1Q702N8 1843 aaKnown RBP3.76□□□□□ -1.81
DMD-219ENST00000471779 USP6P35125 1406 aa3.76□□□□□ -1.81
DMD-219ENST00000471779 TNS3Q68CZ2 1445 aa3.76□□□□□ -1.81
DMD-219ENST00000471779 EDC4Q6P2E9 1401 aaKnown RBP3.76□□□□□ -1.81
DMD-219ENST00000471779 PNPLA6Q8IY17 1366 aa3.76□□□□□ -1.81
DMD-219ENST00000471779 PHLPP1O60346 1717 aa3.75□□□□□ -1.81
DMD-219ENST00000471779 ARHGEF28Q8N1W1 1705 aaKnown RBP3.75□□□□□ -1.81
DMD-219ENST00000471779 AFF2P51816 1311 aa3.75□□□□□ -1.81
DMD-219ENST00000471779 QRICH2Q9H0J4 1663 aa3.75□□□□□ -1.81
DMD-219ENST00000471779 TRAK2O60296 914 aa3.75□□□□□ -1.81
DMD-219ENST00000471779 RHOQP17081 205 aa3.75□□□□□ -1.81
DMD-219ENST00000471779 TATP17735 454 aaPredicted RBP3.75□□□□□ -1.81
DMD-219ENST00000471779 MTHFSP49914 203 aa3.75□□□□□ -1.81
DMD-219ENST00000471779 RRS1Q15050 365 aaKnown RBP3.75□□□□□ -1.81
DMD-219ENST00000471779 VPS72Q15906 364 aa3.75□□□□□ -1.81
DMD-219ENST00000471779 FOXD4L5Q5VV16 416 aaPredicted RBP3.75□□□□□ -1.81
DMD-219ENST00000471779 BPHLQ86WA6 291 aaPredicted RBP3.75□□□□□ -1.81
DMD-219ENST00000471779 FNBP4Q8N3X1 1017 aaPredicted RBP3.75□□□□□ -1.81
DMD-219ENST00000471779 CCDC82Q8N4S0 544 aa3.75□□□□□ -1.81
DMD-219ENST00000471779 ANKRD24Q8TF21 1146 aa3.75□□□□□ -1.81
DMD-219ENST00000471779 RAPGEF4Q8WZA2 1011 aa3.75□□□□□ -1.81
DMD-219ENST00000471779 FMNL2Q96PY5 1086 aa3.75□□□□□ -1.81
DMD-219ENST00000471779 CDCA7Q9BWT1 371 aaPredicted RBP3.75□□□□□ -1.81
DMD-219ENST00000471779 THRAP3Q9Y2W1 955 aaKnown RBP3.75□□□□□ -1.81
DMD-219ENST00000471779 RGPD8O14715 1765 aaPredicted RBP3.75□□□□□ -1.81
DMD-219ENST00000471779 CPSF1Q10570 1443 aaKnown RBP3.75□□□□□ -1.81
DMD-219ENST00000471779 NSD3Q9BZ95 1437 aa3.75□□□□□ -1.81
DMD-219ENST00000471779 FMN2Q9NZ56 1722 aa3.75□□□□□ -1.81
DMD-219ENST00000471779 A0A1W2PP64 1363 aa3.75□□□□□ -1.81
DMD-219ENST00000471779 USP31Q70CQ4 1352 aa3.75□□□□□ -1.81
DMD-219ENST00000471779 KIF1AQ12756 1690 aa3.75□□□□□ -1.81
DMD-219ENST00000471779 ATP7BP35670 1465 aa3.74□□□□□ -1.81
DMD-219ENST00000471779 PIK3R2O00459 728 aa3.74□□□□□ -1.81
DMD-219ENST00000471779 U2SURPO15042 1029 aaKnown RBP3.74□□□□□ -1.81
DMD-219ENST00000471779 ADGRB2O60241 1585 aa3.74□□□□□ -1.81
DMD-219ENST00000471779 DIAPH1O60610 1272 aaKnown RBP3.74□□□□□ -1.81
DMD-219ENST00000471779 FBLN1P23142 703 aa3.74□□□□□ -1.81
DMD-219ENST00000471779 HOXC9P31274 260 aa3.74□□□□□ -1.81
DMD-219ENST00000471779 MAP2K3P46734 347 aa3.74□□□□□ -1.81
DMD-219ENST00000471779 SF3B2Q13435 895 aaKnown RBP3.74□□□□□ -1.81
DMD-219ENST00000471779 PLEKHO1Q53GL0 409 aaPredicted RBP3.74□□□□□ -1.81
DMD-219ENST00000471779 DIEXFQ68CQ4 756 aaKnown RBP3.74□□□□□ -1.81
DMD-219ENST00000471779 GIGYF2Q6Y7W6 1299 aaKnown RBP3.74□□□□□ -1.81
DMD-219ENST00000471779 LYSMD3Q7Z3D4 306 aa3.74□□□□□ -1.81
DMD-219ENST00000471779 RIC3Q7Z5B4 369 aa3.74□□□□□ -1.81
DMD-219ENST00000471779 NALCNQ8IZF0 1738 aa3.74□□□□□ -1.81
DMD-219ENST00000471779 TCP11L2Q8N4U5 519 aa3.74□□□□□ -1.81
DMD-219ENST00000471779 PROCA1Q8NCQ7 364 aaPredicted RBP3.74□□□□□ -1.81
DMD-219ENST00000471779 DDRGK1Q96HY6 314 aa3.74□□□□□ -1.81
DMD-219ENST00000471779 GMCL1Q96IK5 515 aa3.74□□□□□ -1.81
DMD-219ENST00000471779 NOP53Q9NZM5 478 aaKnown RBP3.74□□□□□ -1.81
DMD-219ENST00000471779 MAP10Q9P2G4 905 aa3.74□□□□□ -1.81
DMD-219ENST00000471779 POLKQ9UBT6 870 aa3.74□□□□□ -1.81
DMD-219ENST00000471779 NSD2O96028 1365 aa3.74□□□□□ -1.81
DMD-219ENST00000471779 KIAA0232Q92628 1395 aa3.74□□□□□ -1.81
DMD-219ENST00000471779 USP19O94966 1318 aa3.73□□□□□ -1.81
DMD-219ENST00000471779 MAP3K19Q56UN5 1328 aa3.73□□□□□ -1.81
DMD-219ENST00000471779 ITSN1Q15811 1721 aa3.73□□□□□ -1.81
DMD-219ENST00000471779 A6NJR5 290 aa3.73□□□□□ -1.81
DMD-219ENST00000471779 FDX1P10109 184 aa3.73□□□□□ -1.81
DMD-219ENST00000471779 IL2RBP14784 551 aa3.73□□□□□ -1.81
DMD-219ENST00000471779 HMGB2P26583 209 aaKnown RBP3.73□□□□□ -1.81
DMD-219ENST00000471779 PPP2R1AP30153 589 aa3.73□□□□□ -1.81
DMD-219ENST00000471779 MCM6Q14566 821 aa3.73□□□□□ -1.81
DMD-219ENST00000471779 WDR43Q15061 677 aaKnown RBP eCLIP3.73□□□□□ -1.81
DMD-219ENST00000471779 DDB1Q16531 1140 aa3.73□□□□□ -1.81
DMD-219ENST00000471779 HSP90AB2PQ58FF8 381 aa3.73□□□□□ -1.81
DMD-219ENST00000471779 LARP1Q6PKG0 1096 aaKnown RBP3.73□□□□□ -1.81
DMD-219ENST00000471779 POTEAQ6S8J7 498 aa3.73□□□□□ -1.81
DMD-219ENST00000471779 PRICKLE2Q7Z3G6 844 aa3.73□□□□□ -1.81
DMD-219ENST00000471779 SEPT12Q8IYM1 358 aa3.73□□□□□ -1.81
DMD-219ENST00000471779 PRR7Q8TB68 274 aa3.73□□□□□ -1.81
DMD-219ENST00000471779 DDX54Q8TDD1 881 aaKnown RBP3.73□□□□□ -1.81
DMD-219ENST00000471779 CARD10Q9BWT7 1032 aa3.73□□□□□ -1.81
DMD-219ENST00000471779 SPG7Q9UQ90 795 aa3.73□□□□□ -1.81
DMD-219ENST00000471779 MAP4K5Q9Y4K4 846 aa3.73□□□□□ -1.81
DMD-219ENST00000471779 CPDO75976 1380 aa3.73□□□□□ -1.81
DMD-219ENST00000471779 AATKQ6ZMQ8 1374 aa3.73□□□□□ -1.81
DMD-219ENST00000471779 AHDC1Q5TGY3 1603 aaPredicted RBP3.73□□□□□ -1.81
DMD-219ENST00000471779 PXDNQ92626 1479 aa3.73□□□□□ -1.81
DMD-219ENST00000471779 WDR17Q8IZU2 1322 aa3.72□□□□□ -1.81
DMD-219ENST00000471779 SMG6Q86US8 1419 aaKnown RBP3.72□□□□□ -1.81
DMD-219ENST00000471779 U2AF1L5P0DN76 240 aaPredicted RBP3.72□□□□□ -1.81
DMD-219ENST00000471779 U2AF1Q01081 240 aaKnown RBP eCLIP3.72□□□□□ -1.81
DMD-219ENST00000471779 AMOTQ4VCS5 1084 aa3.72□□□□□ -1.81
DMD-219ENST00000471779 C1orf141Q5JVX7 400 aa3.72□□□□□ -1.81
DMD-219ENST00000471779 KRT27Q7Z3Y8 459 aa3.72□□□□□ -1.81
DMD-219ENST00000471779 CCDC125Q86Z20 511 aa3.72□□□□□ -1.81
DMD-219ENST00000471779 ZCRB1Q8TBF4 217 aaKnown RBP3.72□□□□□ -1.81
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms