RNA–Protein interactions for RNA: ENST00000471538.1

SPEN-204, Transcript of spen family transcriptional repressor, humanhuman

TSL 2

Gene SPEN, Length 1,404 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPEN-204ENST00000471538 NUCB2P80303 420 aa7.78□□□□□ -1.16
SPEN-204ENST00000471538 OS9Q13438 667 aaPredicted RBP7.78□□□□□ -1.16
SPEN-204ENST00000471538 FAM196AQ6ZSG2 479 aa7.78□□□□□ -1.16
SPEN-204ENST00000471538 ZGPATQ8N5A5 531 aaKnown RBP7.78□□□□□ -1.16
SPEN-204ENST00000471538 ZNF784Q8NCA9 323 aaPredicted RBP7.78□□□□□ -1.16
SPEN-204ENST00000471538 KCNB2Q92953 911 aa7.78□□□□□ -1.16
SPEN-204ENST00000471538 THRAP3Q9Y2W1 955 aaKnown RBP7.78□□□□□ -1.16
SPEN-204ENST00000471538 ITGB4P16144 1822 aa7.78□□□□□ -1.16
SPEN-204ENST00000471538 H7C1W4 665 aa7.78□□□□□ -1.16
SPEN-204ENST00000471538 BAG4O95429 457 aaKnown RBP7.78□□□□□ -1.16
SPEN-204ENST00000471538 IFIT2P09913 472 aaKnown RBP7.78□□□□□ -1.16
SPEN-204ENST00000471538 PTMSP20962 102 aa7.78□□□□□ -1.16
SPEN-204ENST00000471538 NEK4P51957 841 aa7.78□□□□□ -1.16
SPEN-204ENST00000471538 EVA1CP58658 441 aa7.78□□□□□ -1.16
SPEN-204ENST00000471538 PTPN12Q05209 780 aaKnown RBP7.78□□□□□ -1.16
SPEN-204ENST00000471538 G3BP1Q13283 466 aaKnown RBP eCLIP7.78□□□□□ -1.16
SPEN-204ENST00000471538 AACSQ86V21 672 aa7.78□□□□□ -1.16
SPEN-204ENST00000471538 EVI5LQ96CN4 794 aa7.78□□□□□ -1.16
SPEN-204ENST00000471538 GPATCH3Q96I76 525 aa7.78□□□□□ -1.16
SPEN-204ENST00000471538 TMX3Q96JJ7 454 aa7.78□□□□□ -1.16
SPEN-204ENST00000471538 SPON1Q9HCB6 807 aa7.78□□□□□ -1.16
SPEN-204ENST00000471538 ANO8Q9HCE9 1232 aaPredicted RBP7.78□□□□□ -1.16
SPEN-204ENST00000471538 TLR7Q9NYK1 1049 aaKnown RBP7.78□□□□□ -1.16
SPEN-204ENST00000471538 ZDHHC9Q9Y397 364 aa7.78□□□□□ -1.16
SPEN-204ENST00000471538 FOXO4P98177 505 aa7.77□□□□□ -1.17
SPEN-204ENST00000471538 PKP1Q13835 747 aa7.77□□□□□ -1.17
SPEN-204ENST00000471538 TTLL7Q6ZT98 887 aa7.77□□□□□ -1.17
SPEN-204ENST00000471538 PTF1AQ7RTS3 328 aa7.77□□□□□ -1.17
SPEN-204ENST00000471538 KLHDC4Q8TBB5 520 aa7.77□□□□□ -1.17
SPEN-204ENST00000471538 INTS4Q96HW7 963 aaKnown RBP7.77□□□□□ -1.17
SPEN-204ENST00000471538 TTC14Q96N46 770 aa7.77□□□□□ -1.17
SPEN-204ENST00000471538 SNX14Q9Y5W7 946 aa7.77□□□□□ -1.17
SPEN-204ENST00000471538 MED23Q9ULK4 1368 aa7.77□□□□□ -1.17
SPEN-204ENST00000471538 SBF2Q86WG5 1849 aa7.76□□□□□ -1.17
SPEN-204ENST00000471538 A0A087WZG4 1122 aa7.76□□□□□ -1.17
SPEN-204ENST00000471538 ATP5J2-PTCD1G3V325 749 aa7.76□□□□□ -1.17
SPEN-204ENST00000471538 PTCD1O75127 700 aaKnown RBP7.76□□□□□ -1.17
SPEN-204ENST00000471538 LSM11P83369 360 aaKnown RBP eCLIP7.76□□□□□ -1.17
SPEN-204ENST00000471538 RFX7Q2KHR2 1363 aa7.76□□□□□ -1.17
SPEN-204ENST00000471538 ARSIQ5FYB1 569 aa7.76□□□□□ -1.17
SPEN-204ENST00000471538 IFFO2Q5TF58 517 aa7.76□□□□□ -1.17
SPEN-204ENST00000471538 CWC27Q6UX04 472 aaKnown RBP7.76□□□□□ -1.17
SPEN-204ENST00000471538 UBE3BQ7Z3V4 1068 aa7.76□□□□□ -1.17
SPEN-204ENST00000471538 MS4A4AQ96JQ5 239 aa7.76□□□□□ -1.17
SPEN-204ENST00000471538 CCDC8Q9H0W5 538 aaPredicted RBP7.76□□□□□ -1.17
SPEN-204ENST00000471538 STRN4Q9NRL3 753 aa7.76□□□□□ -1.17
SPEN-204ENST00000471538 PPP1R1BQ9UD71 204 aaPredicted RBP7.76□□□□□ -1.17
SPEN-204ENST00000471538 RGPD3A6NKT7 1758 aaPredicted RBP7.75□□□□□ -1.17
SPEN-204ENST00000471538 RGPD4Q7Z3J3 1758 aa7.75□□□□□ -1.17
SPEN-204ENST00000471538 A1BGP04217 495 aa7.75□□□□□ -1.17
SPEN-204ENST00000471538 PTH1RQ03431 593 aa7.75□□□□□ -1.17
SPEN-204ENST00000471538 SKOR2Q2VWA4 1001 aaPredicted RBP7.75□□□□□ -1.17
SPEN-204ENST00000471538 TNNI3KQ59H18 835 aa7.75□□□□□ -1.17
SPEN-204ENST00000471538 L1TD1Q5T7N2 865 aaKnown RBP7.75□□□□□ -1.17
SPEN-204ENST00000471538 BARGINQ6ZT62 677 aa7.75□□□□□ -1.17
SPEN-204ENST00000471538 VSIG10Q8N0Z9 540 aa7.75□□□□□ -1.17
SPEN-204ENST00000471538 RUFY2Q8WXA3 655 aa7.75□□□□□ -1.17
SPEN-204ENST00000471538 JARID2Q92833 1246 aaPredicted RBP7.75□□□□□ -1.17
SPEN-204ENST00000471538 ISCA1Q9BUE6 129 aa7.75□□□□□ -1.17
SPEN-204ENST00000471538 CDCA7Q9BWT1 371 aaPredicted RBP7.75□□□□□ -1.17
SPEN-204ENST00000471538 UPF3BQ9BZI7 483 aaKnown RBP7.75□□□□□ -1.17
SPEN-204ENST00000471538 SIL1Q9H173 461 aa7.75□□□□□ -1.17
SPEN-204ENST00000471538 DIAPH3Q9NSV4 1193 aa7.75□□□□□ -1.17
SPEN-204ENST00000471538 DBNLQ9UJU6 430 aaKnown RBP7.75□□□□□ -1.17
SPEN-204ENST00000471538 FPGT-TNNI3KV9GXZ4 949 aa7.75□□□□□ -1.17
SPEN-204ENST00000471538 CHD4Q14839 1912 aa7.75□□□□□ -1.17
SPEN-204ENST00000471538 RPAP1Q9BWH6 1393 aaPredicted RBP7.74□□□□□ -1.17
SPEN-204ENST00000471538 CCDC171Q6TFL3 1326 aa7.74□□□□□ -1.17
SPEN-204ENST00000471538 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP7.74□□□□□ -1.17
SPEN-204ENST00000471538 HIP1O00291 1037 aa7.74□□□□□ -1.17
SPEN-204ENST00000471538 BRD1O95696 1058 aa7.74□□□□□ -1.17
SPEN-204ENST00000471538 ATP5JP18859 108 aa7.74□□□□□ -1.17
SPEN-204ENST00000471538 TFCP2Q12800 502 aa7.74□□□□□ -1.17
SPEN-204ENST00000471538 NECTIN1Q15223 517 aa7.74□□□□□ -1.17
SPEN-204ENST00000471538 CCDC191Q8NCU4 936 aa7.74□□□□□ -1.17
SPEN-204ENST00000471538 DDX54Q8TDD1 881 aaKnown RBP7.74□□□□□ -1.17
SPEN-204ENST00000471538 RNF25Q96BH1 459 aaPredicted RBP7.74□□□□□ -1.17
SPEN-204ENST00000471538 ZFP91Q96JP5 570 aaPredicted RBP7.74□□□□□ -1.17
SPEN-204ENST00000471538 FAM227BQ96M60 508 aa7.74□□□□□ -1.17
SPEN-204ENST00000471538 TM6SF1Q9BZW5 370 aa7.74□□□□□ -1.17
SPEN-204ENST00000471538 LMBRD1Q9NUN5 540 aa7.74□□□□□ -1.17
SPEN-204ENST00000471538 CWC25Q9NXE8 425 aaPredicted RBP7.74□□□□□ -1.17
SPEN-204ENST00000471538 PLA2G2EQ9NZK7 142 aa7.74□□□□□ -1.17
SPEN-204ENST00000471538 BRPF3Q9ULD4 1205 aa7.74□□□□□ -1.17
SPEN-204ENST00000471538 ANKRD36CQ5JPF3 1778 aa7.74□□□□□ -1.17
SPEN-204ENST00000471538 BCL9O00512 1426 aa7.73□□□□□ -1.17
SPEN-204ENST00000471538 ZNF609O15014 1411 aa7.73□□□□□ -1.17
SPEN-204ENST00000471538 RIOK3O14730 519 aaKnown RBP7.73□□□□□ -1.17
SPEN-204ENST00000471538 C1QTNF8P60827 252 aa7.73□□□□□ -1.17
SPEN-204ENST00000471538 TRIM28Q13263 835 aaKnown RBP7.73□□□□□ -1.17
SPEN-204ENST00000471538 NMIQ13287 307 aaPredicted RBP7.73□□□□□ -1.17
SPEN-204ENST00000471538 KLHL40Q2TBA0 621 aa7.73□□□□□ -1.17
SPEN-204ENST00000471538 LMBR1LQ6UX01 489 aa7.73□□□□□ -1.17
SPEN-204ENST00000471538 KIAA1211Q6ZU35 1233 aa7.73□□□□□ -1.17
SPEN-204ENST00000471538 ATG9AQ7Z3C6 839 aa7.73□□□□□ -1.17
SPEN-204ENST00000471538 PIGBQ92521 554 aa7.73□□□□□ -1.17
SPEN-204ENST00000471538 MAP4K1Q92918 833 aa7.73□□□□□ -1.17
SPEN-204ENST00000471538 KHSRPQ92945 711 aaKnown RBP eCLIP7.73□□□□□ -1.178e-13■■□□□ 12.3
SPEN-204ENST00000471538 GZF1Q9H116 711 aaPredicted RBP7.73□□□□□ -1.17
SPEN-204ENST00000471538 BOLA2Q9H3K6 86 aa7.73□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms