RNA–Protein interactions for RNA: ENST00000471438.2

CSMD2-208, Transcript of CUB and Sushi multiple domains 2, humanhuman

TSL 5

Gene CSMD2, Length 355 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD2-208ENST00000471438 DEAF1O75398 565 aaPredicted RBP5.28□□□□□ -1.56
CSMD2-208ENST00000471438 CPB1P15086 417 aa5.28□□□□□ -1.56
CSMD2-208ENST00000471438 GRIK5Q16478 980 aa5.28□□□□□ -1.56
CSMD2-208ENST00000471438 ASIC4Q96FT7 647 aa5.28□□□□□ -1.56
CSMD2-208ENST00000471438 PNMA5Q96PV4 448 aa5.28□□□□□ -1.56
CSMD2-208ENST00000471438 SERTM1A2A2V5 107 aa5.27□□□□□ -1.57
CSMD2-208ENST00000471438 RAD21O60216 631 aa5.27□□□□□ -1.57
CSMD2-208ENST00000471438 GLB1P16278 677 aa5.27□□□□□ -1.57
CSMD2-208ENST00000471438 PCSK7Q16549 785 aa5.27□□□□□ -1.57
CSMD2-208ENST00000471438 LPIN3Q9BQK8 851 aa5.27□□□□□ -1.57
CSMD2-208ENST00000471438 FRRS1LQ9P0K9 344 aa5.27□□□□□ -1.57
CSMD2-208ENST00000471438 GRIN2AQ12879 1464 aa5.26□□□□□ -1.57
CSMD2-208ENST00000471438 SETBP1Q9Y6X0 1596 aa5.26□□□□□ -1.57
CSMD2-208ENST00000471438 NUP160Q12769 1436 aa5.26□□□□□ -1.57
CSMD2-208ENST00000471438 ASXL2Q76L83 1435 aa5.26□□□□□ -1.57
CSMD2-208ENST00000471438 NFIAQ12857 509 aa5.26□□□□□ -1.57
CSMD2-208ENST00000471438 ABI1Q8IZP0 508 aa5.26□□□□□ -1.57
CSMD2-208ENST00000471438 PLPP7Q8NBV4 271 aa5.26□□□□□ -1.57
CSMD2-208ENST00000471438 POM121Q96HA1 1249 aa5.26□□□□□ -1.57
CSMD2-208ENST00000471438 GTF3C5Q9Y5Q8 519 aaPredicted RBP5.26□□□□□ -1.57
CSMD2-208ENST00000471438 CUX1P39880 1505 aa5.26□□□□□ -1.57
CSMD2-208ENST00000471438 DHX57Q6P158 1386 aaKnown RBP5.26□□□□□ -1.57
CSMD2-208ENST00000471438 PLB1Q6P1J6 1458 aa5.26□□□□□ -1.57
CSMD2-208ENST00000471438 ARID4BQ4LE39 1312 aaPredicted RBP5.25□□□□□ -1.57
CSMD2-208ENST00000471438 DHX15O43143 795 aaKnown RBP5.25□□□□□ -1.57
CSMD2-208ENST00000471438 TBCELQ5QJ74 424 aa5.25□□□□□ -1.57
CSMD2-208ENST00000471438 SH3PXD2AQ5TCZ1 1133 aa5.25□□□□□ -1.57
CSMD2-208ENST00000471438 ELMSAN1Q6PJG2 1045 aa5.25□□□□□ -1.57
CSMD2-208ENST00000471438 Q6ZS46 218 aa5.25□□□□□ -1.57
CSMD2-208ENST00000471438 SLC9A9Q8IVB4 645 aa5.25□□□□□ -1.57
CSMD2-208ENST00000471438 ZNF280CQ8ND82 737 aa5.25□□□□□ -1.57
CSMD2-208ENST00000471438 PRR19A6NJB7 356 aa5.24□□□□□ -1.57
CSMD2-208ENST00000471438 LZTS3O60299 673 aaPredicted RBP5.24□□□□□ -1.57
CSMD2-208ENST00000471438 NFKB1P19838 968 aa5.24□□□□□ -1.57
CSMD2-208ENST00000471438 PLAURQ03405 335 aa5.24□□□□□ -1.57
CSMD2-208ENST00000471438 EML3Q32P44 896 aa5.24□□□□□ -1.57
CSMD2-208ENST00000471438 PERM1Q5SV97 790 aa5.24□□□□□ -1.57
CSMD2-208ENST00000471438 C1orf53Q5VUE5 145 aa5.24□□□□□ -1.57
CSMD2-208ENST00000471438 AGGF1Q8N302 714 aaeCLIP5.24□□□□□ -1.57
CSMD2-208ENST00000471438 SUSD3Q96L08 255 aa5.24□□□□□ -1.57
CSMD2-208ENST00000471438 DBNDD2Q9BQY9 259 aa5.24□□□□□ -1.57
CSMD2-208ENST00000471438 GSX2Q9BZM3 304 aa5.24□□□□□ -1.57
CSMD2-208ENST00000471438 ALG2Q9H553 416 aa5.24□□□□□ -1.57
CSMD2-208ENST00000471438 SKIP12755 728 aa5.23□□□□□ -1.57
CSMD2-208ENST00000471438 YY1P25490 414 aa5.23□□□□□ -1.57
CSMD2-208ENST00000471438 SERBP1Q8NC51 408 aaKnown RBP eCLIP5.23□□□□□ -1.57
CSMD2-208ENST00000471438 TTC9Q92623 222 aa5.23□□□□□ -1.57
CSMD2-208ENST00000471438 ZNF358Q9NW07 568 aa5.23□□□□□ -1.57
CSMD2-208ENST00000471438 NOD1Q9Y239 953 aa5.23□□□□□ -1.57
CSMD2-208ENST00000471438 HCN4Q9Y3Q4 1203 aa5.23□□□□□ -1.57
CSMD2-208ENST00000471438 PCDHGA11Q9Y5H2 935 aa5.23□□□□□ -1.57
CSMD2-208ENST00000471438 KIAA0556O60303 1618 aa5.23□□□□□ -1.57
CSMD2-208ENST00000471438 KIF27Q86VH2 1401 aa5.23□□□□□ -1.57
CSMD2-208ENST00000471438 PIK3CDO00329 1044 aa5.22□□□□□ -1.57
CSMD2-208ENST00000471438 PSME1Q06323 249 aa5.22□□□□□ -1.57
CSMD2-208ENST00000471438 FLIIQ13045 1269 aa5.22□□□□□ -1.57
CSMD2-208ENST00000471438 CCINQ13939 588 aa5.22□□□□□ -1.57
CSMD2-208ENST00000471438 RNF43Q68DV7 783 aa5.22□□□□□ -1.57
CSMD2-208ENST00000471438 SPOCD1Q6ZMY3 1216 aa5.22□□□□□ -1.57
CSMD2-208ENST00000471438 NFATC2IPQ8NCF5 419 aa5.22□□□□□ -1.57
CSMD2-208ENST00000471438 ADAMTS19Q8TE59 1207 aa5.22□□□□□ -1.57
CSMD2-208ENST00000471438 DCAF11Q8TEB1 546 aa5.22□□□□□ -1.57
CSMD2-208ENST00000471438 UBL7Q96S82 380 aaPredicted RBP5.22□□□□□ -1.57
CSMD2-208ENST00000471438 PHACTR1Q9C0D0 580 aa5.22□□□□□ -1.57
CSMD2-208ENST00000471438 CHMP3Q9Y3E7 222 aa5.22□□□□□ -1.57
CSMD2-208ENST00000471438 EPRSP07814 1512 aaKnown RBP5.22□□□□□ -1.57
CSMD2-208ENST00000471438 TIAM1Q13009 1591 aa5.21□□□□□ -1.57
CSMD2-208ENST00000471438 ARHGAP35Q9NRY4 1499 aa5.21□□□□□ -1.58
CSMD2-208ENST00000471438 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP5.21□□□□□ -1.58
CSMD2-208ENST00000471438 EPHA4P54764 986 aa5.21□□□□□ -1.58
CSMD2-208ENST00000471438 TMEM132AQ24JP5 1023 aa5.21□□□□□ -1.58
CSMD2-208ENST00000471438 LCE5AQ5TCM9 118 aa5.21□□□□□ -1.58
CSMD2-208ENST00000471438 BTLAQ7Z6A9 289 aa5.21□□□□□ -1.58
CSMD2-208ENST00000471438 TRIM42Q8IWZ5 723 aa5.21□□□□□ -1.58
CSMD2-208ENST00000471438 TNS4Q8IZW8 715 aa5.21□□□□□ -1.58
CSMD2-208ENST00000471438 ARMC10Q8N2F6 343 aa5.21□□□□□ -1.58
CSMD2-208ENST00000471438 C7orf69Q9H7B7 122 aa5.21□□□□□ -1.58
CSMD2-208ENST00000471438 ANGEL1Q9UNK9 670 aaKnown RBP5.21□□□□□ -1.58
CSMD2-208ENST00000471438 TIMELESSQ9UNS1 1208 aa5.21□□□□□ -1.58
CSMD2-208ENST00000471438 CUL7Q14999 1698 aa5.21□□□□□ -1.58
CSMD2-208ENST00000471438 ZNF335Q9H4Z2 1342 aaPredicted RBP5.21□□□□□ -1.58
CSMD2-208ENST00000471438 HMX2A2RU54 273 aa5.2□□□□□ -1.58
CSMD2-208ENST00000471438 DBX1A6NMT0 343 aa5.2□□□□□ -1.58
CSMD2-208ENST00000471438 KRTAP9-7A8MTY7 169 aa5.2□□□□□ -1.58
CSMD2-208ENST00000471438 JUNBP17275 347 aaPredicted RBP5.2□□□□□ -1.58
CSMD2-208ENST00000471438 KRTAP5-3Q6L8H2 238 aa5.2□□□□□ -1.58
CSMD2-208ENST00000471438 TRIM50Q86XT4 487 aa5.2□□□□□ -1.58
CSMD2-208ENST00000471438 SMG9Q9H0W8 520 aaKnown RBP5.2□□□□□ -1.58
CSMD2-208ENST00000471438 SRA1Q9HD15 236 aaKnown RBP5.2□□□□□ -1.58
CSMD2-208ENST00000471438 FER1L4A9Z1Z3 1794 aa5.19□□□□□ -1.58
CSMD2-208ENST00000471438 CCNB3Q8WWL7 1395 aa5.19□□□□□ -1.58
CSMD2-208ENST00000471438 POM121CA8CG34 1229 aa5.19□□□□□ -1.58
CSMD2-208ENST00000471438 ZBTB42B2RXF5 422 aa5.19□□□□□ -1.58
CSMD2-208ENST00000471438 TOM1O60784 492 aa5.19□□□□□ -1.58
CSMD2-208ENST00000471438 PSMA6P60900 246 aaKnown RBP5.19□□□□□ -1.58
CSMD2-208ENST00000471438 GTF2IP78347 998 aa5.19□□□□□ -1.58
CSMD2-208ENST00000471438 MLLT1Q03111 559 aaPredicted RBP5.19□□□□□ -1.58
CSMD2-208ENST00000471438 CBLL1Q75N03 491 aa5.19□□□□□ -1.58
CSMD2-208ENST00000471438 ZC3HAV1Q7Z2W4 902 aaKnown RBP5.19□□□□□ -1.58
CSMD2-208ENST00000471438 SHKBP1Q8TBC3 707 aa5.19□□□□□ -1.58
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms