RNA–Protein interactions for RNA: ENST00000470837.1

CCM2-204, Transcript of CCM2 scaffold protein, humanhuman

TSL 5

Gene CCM2, Length 549 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-204ENST00000470837 TMC4Q7Z404 712 aa11.94□□□□□ -0.5
CCM2-204ENST00000470837 ANKRD2Q9GZV1 360 aa11.94□□□□□ -0.5
CCM2-204ENST00000470837 CCDC8Q9H0W5 538 aaPredicted RBP11.94□□□□□ -0.5
CCM2-204ENST00000470837 ECHDC1Q9NTX5 307 aa11.94□□□□□ -0.5
CCM2-204ENST00000470837 RIPOR2Q9Y4F9 1068 aa11.94□□□□□ -0.5
CCM2-204ENST00000470837 EIF5BO60841 1220 aaKnown RBP11.93□□□□□ -0.5
CCM2-204ENST00000470837 BBOX1O75936 387 aa11.93□□□□□ -0.5
CCM2-204ENST00000470837 GLRX3O76003 335 aaKnown RBP11.93□□□□□ -0.5
CCM2-204ENST00000470837 PDE8BO95263 885 aa11.93□□□□□ -0.5
CCM2-204ENST00000470837 SLC5A1P13866 664 aa11.93□□□□□ -0.5
CCM2-204ENST00000470837 CRY2Q49AN0 593 aa11.93□□□□□ -0.5
CCM2-204ENST00000470837 BMP2KLQ5H9B9 411 aa11.93□□□□□ -0.5
CCM2-204ENST00000470837 TTC22Q5TAA0 569 aa11.93□□□□□ -0.5
CCM2-204ENST00000470837 OTUD7AQ8TE49 926 aaPredicted RBP11.93□□□□□ -0.5
CCM2-204ENST00000470837 EAF2Q96CJ1 260 aaPredicted RBP11.93□□□□□ -0.5
CCM2-204ENST00000470837 MASTLQ96GX5 879 aa11.93□□□□□ -0.5
CCM2-204ENST00000470837 CRAMP1Q96RY5 1269 aa11.93□□□□□ -0.5
CCM2-204ENST00000470837 OSBPL3Q9H4L5 887 aa11.93□□□□□ -0.5
CCM2-204ENST00000470837 STAP2Q9UGK3 403 aa11.93□□□□□ -0.5
CCM2-204ENST00000470837 A0A1B0GUL7 405 aa11.92□□□□□ -0.5
CCM2-204ENST00000470837 KLRG2A4D1S0 409 aaPredicted RBP11.92□□□□□ -0.5
CCM2-204ENST00000470837 TRIM6-TRIM34B2RNG4 842 aa11.92□□□□□ -0.5
CCM2-204ENST00000470837 CHRNDQ07001 517 aa11.92□□□□□ -0.5
CCM2-204ENST00000470837 C2CD5Q86YS7 1000 aa11.92□□□□□ -0.5
CCM2-204ENST00000470837 LPIN2Q92539 896 aa11.92□□□□□ -0.5
CCM2-204ENST00000470837 CELF1Q92879 486 aaKnown RBP11.92□□□□□ -0.5
CCM2-204ENST00000470837 ZNF622Q969S3 477 aaKnown RBP eCLIP11.92□□□□□ -0.5
CCM2-204ENST00000470837 ANKIB1Q9P2G1 1089 aa11.92□□□□□ -0.5
CCM2-204ENST00000470837 ATF5Q9Y2D1 282 aaPredicted RBP11.92□□□□□ -0.5
CCM2-204ENST00000470837 PSDA5PKW4 1024 aaPredicted RBP11.91□□□□□ -0.5
CCM2-204ENST00000470837 SRGNP10124 158 aa11.91□□□□□ -0.5
CCM2-204ENST00000470837 HOXA10P31260 410 aaPredicted RBP11.91□□□□□ -0.5
CCM2-204ENST00000470837 TIMM10P62072 90 aa11.91□□□□□ -0.5
CCM2-204ENST00000470837 TTC39AQ5SRH9 613 aa11.91□□□□□ -0.5
CCM2-204ENST00000470837 CNTROBQ8N137 903 aa11.91□□□□□ -0.5
CCM2-204ENST00000470837 HELBQ8NG08 1087 aaPredicted RBP11.91□□□□□ -0.5
CCM2-204ENST00000470837 PDGFDQ9GZP0 370 aaPredicted RBP11.91□□□□□ -0.5
CCM2-204ENST00000470837 LAMB2P55268 1798 aa11.9□□□□□ -0.5
CCM2-204ENST00000470837 PPEF1O14829 653 aaPredicted RBP11.9□□□□□ -0.5
CCM2-204ENST00000470837 UBE4AQ14139 1066 aa11.9□□□□□ -0.5
CCM2-204ENST00000470837 QSER1Q2KHR3 1735 aa11.9□□□□□ -0.5
CCM2-204ENST00000470837 CAVIN4Q5BKX8 364 aa11.9□□□□□ -0.5
CCM2-204ENST00000470837 TSHZ3Q63HK5 1081 aa11.9□□□□□ -0.5
CCM2-204ENST00000470837 STYK1Q6J9G0 422 aa11.9□□□□□ -0.5
CCM2-204ENST00000470837 VPS37DQ86XT2 251 aa11.9□□□□□ -0.5
CCM2-204ENST00000470837 CNKSR1Q969H4 720 aa11.9□□□□□ -0.5
CCM2-204ENST00000470837 RILPL2Q969X0 211 aa11.9□□□□□ -0.5
CCM2-204ENST00000470837 DBNDD2Q9BQY9 259 aa11.9□□□□□ -0.5
CCM2-204ENST00000470837 GNL3LQ9NVN8 582 aaKnown RBP11.9□□□□□ -0.5
CCM2-204ENST00000470837 DBNLQ9UJU6 430 aaKnown RBP11.9□□□□□ -0.5
CCM2-204ENST00000470837 MINPP1Q9UNW1 487 aa11.9□□□□□ -0.5
CCM2-204ENST00000470837 TUBGCP6Q96RT7 1819 aa11.9□□□□□ -0.5
CCM2-204ENST00000470837 DDX60Q8IY21 1712 aaKnown RBP11.89□□□□□ -0.51
CCM2-204ENST00000470837 ZNF609O15014 1411 aa11.89□□□□□ -0.51
CCM2-204ENST00000470837 TAF5LO75529 589 aa11.89□□□□□ -0.51
CCM2-204ENST00000470837 XAGE2Q96GT9 111 aa11.89□□□□□ -0.51
CCM2-204ENST00000470837 TLR7Q9NYK1 1049 aaKnown RBP11.89□□□□□ -0.51
CCM2-204ENST00000470837 PPP1R1BQ9UD71 204 aaPredicted RBP11.89□□□□□ -0.51
CCM2-204ENST00000470837 XDHP47989 1333 aa11.88□□□□□ -0.51
CCM2-204ENST00000470837 SALL3Q9BXA9 1300 aa11.88□□□□□ -0.51
CCM2-204ENST00000470837 MYH3P11055 1940 aa11.88□□□□□ -0.51
CCM2-204ENST00000470837 CDC45O75419 566 aa11.88□□□□□ -0.51
CCM2-204ENST00000470837 UQCRFS1P1P0C7P4 283 aa11.88□□□□□ -0.51
CCM2-204ENST00000470837 ATP5JP18859 108 aa11.88□□□□□ -0.51
CCM2-204ENST00000470837 KLHL34Q8N239 644 aa11.88□□□□□ -0.51
CCM2-204ENST00000470837 VGLL2Q8N8G2 317 aa11.88□□□□□ -0.51
CCM2-204ENST00000470837 BOLA2Q9H3K6 86 aa11.88□□□□□ -0.51
CCM2-204ENST00000470837 UPF2Q9HAU5 1272 aaKnown RBP11.88□□□□□ -0.51
CCM2-204ENST00000470837 NSFL1CQ9UNZ2 370 aaKnown RBP11.88□□□□□ -0.51
CCM2-204ENST00000470837 LEMD3Q9Y2U8 911 aa11.88□□□□□ -0.51
CCM2-204ENST00000470837 FRAT2O75474 233 aaPredicted RBP11.87□□□□□ -0.51
CCM2-204ENST00000470837 GSPT1P15170 499 aaKnown RBP11.87□□□□□ -0.51
CCM2-204ENST00000470837 SDSP20132 328 aa11.87□□□□□ -0.51
CCM2-204ENST00000470837 ATP2B4P23634 1241 aa11.87□□□□□ -0.51
CCM2-204ENST00000470837 LRRFIP1Q32MZ4 808 aaKnown RBP11.87□□□□□ -0.51
CCM2-204ENST00000470837 SP8Q8IXZ3 490 aa11.87□□□□□ -0.51
CCM2-204ENST00000470837 PI4K2BQ8TCG2 481 aa11.87□□□□□ -0.51
CCM2-204ENST00000470837 EVI5LQ96CN4 794 aa11.87□□□□□ -0.51
CCM2-204ENST00000470837 DNAJC2Q99543 621 aaKnown RBP11.87□□□□□ -0.51
CCM2-204ENST00000470837 SPON1Q9HCB6 807 aa11.87□□□□□ -0.51
CCM2-204ENST00000470837 GGA1Q9UJY5 639 aa11.87□□□□□ -0.51
CCM2-204ENST00000470837 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP11.87□□□□□ -0.51
CCM2-204ENST00000470837 ZNF804BA4D1E1 1349 aa11.86□□□□□ -0.51
CCM2-204ENST00000470837 HIP1O00291 1037 aa11.86□□□□□ -0.51
CCM2-204ENST00000470837 FGFR2P21802 821 aa11.86□□□□□ -0.51
CCM2-204ENST00000470837 CHRNA5P30532 468 aa11.86□□□□□ -0.51
CCM2-204ENST00000470837 ADORA1P30542 326 aa11.86□□□□□ -0.51
CCM2-204ENST00000470837 TGFB2P61812 414 aa11.86□□□□□ -0.51
CCM2-204ENST00000470837 PPIL4Q8WUA2 492 aaKnown RBP eCLIP11.86□□□□□ -0.51
CCM2-204ENST00000470837 ATP6V0A2Q9Y487 856 aa11.86□□□□□ -0.51
CCM2-204ENST00000470837 LRP5O75197 1615 aa11.86□□□□□ -0.51
CCM2-204ENST00000470837 C10orf71Q711Q0 1435 aa11.86□□□□□ -0.51
CCM2-204ENST00000470837 C6orf229H3BNL8 230 aa11.85□□□□□ -0.51
CCM2-204ENST00000470837 UFL1O94874 794 aa11.85□□□□□ -0.51
CCM2-204ENST00000470837 MAP4K4O95819 1239 aaPredicted RBP11.85□□□□□ -0.51
CCM2-204ENST00000470837 FKBP4Q02790 459 aaKnown RBP eCLIP11.85□□□□□ -0.51
CCM2-204ENST00000470837 CCDC102BQ68D86 513 aa11.85□□□□□ -0.51
CCM2-204ENST00000470837 CC2D2BQ6DHV5 1058 aa11.85□□□□□ -0.51
CCM2-204ENST00000470837 PRPF40BQ6NWY9 871 aaKnown RBP11.85□□□□□ -0.51
CCM2-204ENST00000470837 DPP8Q6V1X1 898 aaPredicted RBP11.85□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 19 ms