RNA–Protein interactions for RNA: ENST00000470815.1

HERC3-208, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 3, humanhuman

TSL 4

Gene HERC3, Length 564 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC3-208ENST00000470815 OPLAHO14841 1288 aa6.65□□□□□ -1.34
HERC3-208ENST00000470815 LGR5O75473 907 aa6.65□□□□□ -1.34
HERC3-208ENST00000470815 FSTP19883 344 aa6.65□□□□□ -1.34
HERC3-208ENST00000470815 TMEM164Q5U3C3 297 aa6.65□□□□□ -1.34
HERC3-208ENST00000470815 CACTIN-AS1Q8N1I8 211 aa6.65□□□□□ -1.34
HERC3-208ENST00000470815 CLP1Q92989 425 aaKnown RBP6.65□□□□□ -1.34
HERC3-208ENST00000470815 PLD4Q96BZ4 506 aa6.65□□□□□ -1.34
HERC3-208ENST00000470815 LOC102724428A0A0B4J2F2 783 aa6.64□□□□□ -1.35
HERC3-208ENST00000470815 XYLBO75191 536 aa6.64□□□□□ -1.35
HERC3-208ENST00000470815 PSAPP07602 524 aa6.64□□□□□ -1.35
HERC3-208ENST00000470815 SIK1P57059 783 aa6.64□□□□□ -1.35
HERC3-208ENST00000470815 MCTP1Q6DN14 999 aa6.64□□□□□ -1.35
HERC3-208ENST00000470815 HFE2Q6ZVN8 426 aa6.64□□□□□ -1.35
HERC3-208ENST00000470815 USTQ9Y2C2 406 aa6.64□□□□□ -1.35
HERC3-208ENST00000470815 TMEM88BA6NKF7 163 aa6.63□□□□□ -1.35
HERC3-208ENST00000470815 OCLNQ16625 522 aa6.63□□□□□ -1.35
HERC3-208ENST00000470815 KRTAP19-1Q8IUB9 90 aa6.63□□□□□ -1.35
HERC3-208ENST00000470815 ARID3AQ99856 593 aa6.63□□□□□ -1.35
HERC3-208ENST00000470815 RBSNQ9H1K0 784 aa6.63□□□□□ -1.35
HERC3-208ENST00000470815 GOLGA2P5Q9HBQ8 144 aa6.63□□□□□ -1.35
HERC3-208ENST00000470815 PCMTD2Q9NV79 361 aa6.63□□□□□ -1.35
HERC3-208ENST00000470815 GSC2O15499 205 aa6.62□□□□□ -1.35
HERC3-208ENST00000470815 GHRHP01286 108 aa6.62□□□□□ -1.35
HERC3-208ENST00000470815 CD97P48960 835 aa6.62□□□□□ -1.35
HERC3-208ENST00000470815 SETDB1Q15047 1291 aa6.62□□□□□ -1.35
HERC3-208ENST00000470815 TREML1Q86YW5 311 aa6.62□□□□□ -1.35
HERC3-208ENST00000470815 MUC3BQ9H195 1237 aa6.62□□□□□ -1.35
HERC3-208ENST00000470815 LRFN2Q9ULH4 789 aa6.62□□□□□ -1.35
HERC3-208ENST00000470815 KCNMB2Q9Y691 235 aa6.62□□□□□ -1.35
HERC3-208ENST00000470815 COL17A1Q9UMD9 1497 aaPredicted RBP6.61□□□□□ -1.35
HERC3-208ENST00000470815 MMP20O60882 483 aa6.61□□□□□ -1.35
HERC3-208ENST00000470815 RGL4Q8IZJ4 473 aa6.61□□□□□ -1.35
HERC3-208ENST00000470815 CMTR1Q8N1G2 835 aaKnown RBP6.61□□□□□ -1.35
HERC3-208ENST00000470815 IL22RA1Q8N6P7 574 aa6.61□□□□□ -1.35
HERC3-208ENST00000470815 BTBD11A6QL63 1104 aa6.6□□□□□ -1.35
HERC3-208ENST00000470815 J3QW42 95 aa6.6□□□□□ -1.35
HERC3-208ENST00000470815 ALX3O95076 343 aa6.6□□□□□ -1.35
HERC3-208ENST00000470815 GDF6Q6KF10 455 aaPredicted RBP6.6□□□□□ -1.35
HERC3-208ENST00000470815 ZC3HAV1Q7Z2W4 902 aaKnown RBP6.6□□□□□ -1.35
HERC3-208ENST00000470815 COL26A1Q96A83 441 aa6.6□□□□□ -1.35
HERC3-208ENST00000470815 NSUN5Q96P11 429 aaKnown RBP6.6□□□□□ -1.35
HERC3-208ENST00000470815 SLAIN2Q9P270 581 aa6.6□□□□□ -1.35
HERC3-208ENST00000470815 USP20Q9Y2K6 914 aa6.6□□□□□ -1.35
HERC3-208ENST00000470815 PTCD1O75127 700 aaKnown RBP6.59□□□□□ -1.35
HERC3-208ENST00000470815 PDE4CQ08493 712 aa6.59□□□□□ -1.35
HERC3-208ENST00000470815 CXXC1Q9P0U4 656 aaPredicted RBP6.59□□□□□ -1.35
HERC3-208ENST00000470815 RAXQ9Y2V3 346 aa6.59□□□□□ -1.35
HERC3-208ENST00000470815 KIAA1324LA8MWY0 1029 aaPredicted RBP6.58□□□□□ -1.36
HERC3-208ENST00000470815 COX20Q5RI15 118 aa6.58□□□□□ -1.36
HERC3-208ENST00000470815 NLRP13Q86W25 1043 aa6.58□□□□□ -1.36
HERC3-208ENST00000470815 PPME1Q9Y570 386 aa6.58□□□□□ -1.36
HERC3-208ENST00000470815 PAX4O43316 350 aa6.57□□□□□ -1.36
HERC3-208ENST00000470815 IGLV1-40P01703 118 aa6.57□□□□□ -1.36
HERC3-208ENST00000470815 GLB1P16278 677 aa6.57□□□□□ -1.36
HERC3-208ENST00000470815 SSTR4P31391 388 aa6.57□□□□□ -1.36
HERC3-208ENST00000470815 FKBP5Q13451 457 aaPredicted RBP6.57□□□□□ -1.36
HERC3-208ENST00000470815 RETREG2Q8NC44 543 aa6.57□□□□□ -1.36
HERC3-208ENST00000470815 TRIM33Q9UPN9 1127 aa6.57□□□□□ -1.36
HERC3-208ENST00000470815 SSFA2P28290 1259 aa6.56□□□□□ -1.36
HERC3-208ENST00000470815 TRIP4Q15650 581 aaPredicted RBP6.56□□□□□ -1.36
HERC3-208ENST00000470815 UVSSAQ2YD98 709 aa6.56□□□□□ -1.36
HERC3-208ENST00000470815 AGGF1Q8N302 714 aaeCLIP6.56□□□□□ -1.36
HERC3-208ENST00000470815 OR13H1Q8NG92 308 aa6.56□□□□□ -1.36
HERC3-208ENST00000470815 PRIMPOLQ96LW4 560 aa6.56□□□□□ -1.36
HERC3-208ENST00000470815 KRTAP9-9Q9BYP9 154 aa6.56□□□□□ -1.36
HERC3-208ENST00000470815 KRTAP9-4Q9BYQ2 154 aa6.56□□□□□ -1.36
HERC3-208ENST00000470815 CEP41Q9BYV8 373 aa6.56□□□□□ -1.36
HERC3-208ENST00000470815 FAM13BQ9NYF5 915 aa6.56□□□□□ -1.36
HERC3-208ENST00000470815 DHX15O43143 795 aaKnown RBP6.55□□□□□ -1.36
HERC3-208ENST00000470815 PRMT3O60678 531 aa6.55□□□□□ -1.36
HERC3-208ENST00000470815 COBLO75128 1261 aa6.55□□□□□ -1.36
HERC3-208ENST00000470815 ATP2B4P23634 1241 aa6.55□□□□□ -1.36
HERC3-208ENST00000470815 BRD2P25440 801 aaKnown RBP6.55□□□□□ -1.36
HERC3-208ENST00000470815 ETFBKMTQ8IXQ9 262 aa6.55□□□□□ -1.36
HERC3-208ENST00000470815 FMNL2Q96PY5 1086 aa6.55□□□□□ -1.36
HERC3-208ENST00000470815 UBL7Q96S82 380 aaPredicted RBP6.55□□□□□ -1.36
HERC3-208ENST00000470815 STOML1Q9UBI4 398 aa6.55□□□□□ -1.36
HERC3-208ENST00000470815 TXKP42681 527 aa6.54□□□□□ -1.36
HERC3-208ENST00000470815 PHLDB3Q6NSJ2 640 aa6.54□□□□□ -1.36
HERC3-208ENST00000470815 C16orf46Q6P387 395 aa6.54□□□□□ -1.36
HERC3-208ENST00000470815 GALNT11Q8NCW6 608 aa6.54□□□□□ -1.36
HERC3-208ENST00000470815 TM4SF5O14894 197 aa6.53□□□□□ -1.36
HERC3-208ENST00000470815 CD68P34810 354 aaPredicted RBP6.53□□□□□ -1.36
HERC3-208ENST00000470815 IRAK1P51617 712 aa6.53□□□□□ -1.36
HERC3-208ENST00000470815 HYAL2Q12891 473 aa6.53□□□□□ -1.36
HERC3-208ENST00000470815 B4GALNT3Q6L9W6 998 aa6.53□□□□□ -1.36
HERC3-208ENST00000470815 ARMC10Q8N2F6 343 aa6.53□□□□□ -1.36
HERC3-208ENST00000470815 PIK3R5Q8WYR1 880 aa6.53□□□□□ -1.36
HERC3-208ENST00000470815 UBAP1LF5GYI3 381 aa6.52□□□□□ -1.37
HERC3-208ENST00000470815 LINC01387J3KSC0 135 aa6.52□□□□□ -1.37
HERC3-208ENST00000470815 SMNDC1O75940 238 aaKnown RBP eCLIP6.52□□□□□ -1.37
HERC3-208ENST00000470815 KIF4AO95239 1232 aa6.52□□□□□ -1.37
HERC3-208ENST00000470815 WISP1O95388 367 aa6.52□□□□□ -1.37
HERC3-208ENST00000470815 MED26O95402 600 aa6.52□□□□□ -1.37
HERC3-208ENST00000470815 TGFB1P01137 390 aa6.52□□□□□ -1.37
HERC3-208ENST00000470815 CDC27P30260 824 aa6.52□□□□□ -1.37
HERC3-208ENST00000470815 NFIAQ12857 509 aa6.52□□□□□ -1.37
HERC3-208ENST00000470815 INTS5Q6P9B9 1019 aaKnown RBP6.52□□□□□ -1.37
HERC3-208ENST00000470815 ACAD11Q709F0 780 aa6.52□□□□□ -1.37
HERC3-208ENST00000470815 ZDHHC13Q8IUH4 622 aa6.52□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms