RNA–Protein interactions for RNA: ENST00000470776.1

LMCD1-207, Transcript of LIM and cysteine rich domains 1, humanhuman

TSL 2

Gene LMCD1, Length 579 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMCD1-207ENST00000470776 BSDC1Q9NW68 430 aaPredicted RBP10.9□□□□□ -0.66
LMCD1-207ENST00000470776 DBNLQ9UJU6 430 aaKnown RBP10.9□□□□□ -0.66
LMCD1-207ENST00000470776 QSER1Q2KHR3 1735 aa10.89□□□□□ -0.67
LMCD1-207ENST00000470776 PDE8BO95263 885 aa10.89□□□□□ -0.67
LMCD1-207ENST00000470776 HOXA10P31260 410 aaPredicted RBP10.89□□□□□ -0.67
LMCD1-207ENST00000470776 IGHMBP2P38935 993 aaKnown RBP10.89□□□□□ -0.67
LMCD1-207ENST00000470776 RPS8P62241 208 aaKnown RBP10.89□□□□□ -0.67
LMCD1-207ENST00000470776 ST5P78524 1137 aa10.89□□□□□ -0.67
LMCD1-207ENST00000470776 ANKRD18AQ8IVF6 992 aa10.89□□□□□ -0.67
LMCD1-207ENST00000470776 PPIL4Q8WUA2 492 aaKnown RBP eCLIP10.89□□□□□ -0.67
LMCD1-207ENST00000470776 GPATCH3Q96I76 525 aa10.89□□□□□ -0.67
LMCD1-207ENST00000470776 MPHOSPH8Q99549 860 aa10.89□□□□□ -0.67
LMCD1-207ENST00000470776 BRIP1Q9BX63 1249 aa10.89□□□□□ -0.67
LMCD1-207ENST00000470776 CNNM1Q9NRU3 951 aa10.89□□□□□ -0.67
LMCD1-207ENST00000470776 TLR7Q9NYK1 1049 aaKnown RBP10.89□□□□□ -0.67
LMCD1-207ENST00000470776 ZNF609O15014 1411 aa10.89□□□□□ -0.67
LMCD1-207ENST00000470776 A0A1B0GUL7 405 aa10.88□□□□□ -0.67
LMCD1-207ENST00000470776 CDC45O75419 566 aa10.88□□□□□ -0.67
LMCD1-207ENST00000470776 TIMM10P62072 90 aa10.88□□□□□ -0.67
LMCD1-207ENST00000470776 METTL24Q5JXM2 366 aa10.88□□□□□ -0.67
LMCD1-207ENST00000470776 TICAM2Q86XR7 235 aa10.88□□□□□ -0.67
LMCD1-207ENST00000470776 CELF1Q92879 486 aaKnown RBP10.88□□□□□ -0.67
LMCD1-207ENST00000470776 DBNDD2Q9BQY9 259 aa10.88□□□□□ -0.67
LMCD1-207ENST00000470776 NRXN2Q9P2S2 1712 aa10.88□□□□□ -0.67
LMCD1-207ENST00000470776 TUBGCP6Q96RT7 1819 aa10.88□□□□□ -0.67
LMCD1-207ENST00000470776 MYH3P11055 1940 aa10.88□□□□□ -0.67
LMCD1-207ENST00000470776 ZBTB22O15209 634 aa10.87□□□□□ -0.67
LMCD1-207ENST00000470776 EIF5BO60841 1220 aaKnown RBP10.87□□□□□ -0.67
LMCD1-207ENST00000470776 MMP10P09238 476 aa10.87□□□□□ -0.67
LMCD1-207ENST00000470776 TSHZ3Q63HK5 1081 aa10.87□□□□□ -0.67
LMCD1-207ENST00000470776 DDX46Q7L014 1031 aaKnown RBP10.87□□□□□ -0.67
LMCD1-207ENST00000470776 CCDC24Q8N4L8 307 aa10.87□□□□□ -0.67
LMCD1-207ENST00000470776 LPIN2Q92539 896 aa10.87□□□□□ -0.67
LMCD1-207ENST00000470776 ZNF512BQ96KM6 892 aaPredicted RBP10.87□□□□□ -0.67
LMCD1-207ENST00000470776 CRAMP1Q96RY5 1269 aa10.87□□□□□ -0.67
LMCD1-207ENST00000470776 PDGFDQ9GZP0 370 aaPredicted RBP10.87□□□□□ -0.67
LMCD1-207ENST00000470776 PARP3Q9Y6F1 533 aa10.87□□□□□ -0.67
LMCD1-207ENST00000470776 NPHP1O15259 732 aa10.86□□□□□ -0.67
LMCD1-207ENST00000470776 CHRNDQ07001 517 aa10.86□□□□□ -0.67
LMCD1-207ENST00000470776 GRAPQ13588 217 aa10.86□□□□□ -0.67
LMCD1-207ENST00000470776 PUM3Q15397 648 aaKnown RBP10.86□□□□□ -0.67
LMCD1-207ENST00000470776 ATP2B3Q16720 1220 aa10.86□□□□□ -0.67
LMCD1-207ENST00000470776 TBC1D9Q6ZT07 1266 aa10.86□□□□□ -0.67
LMCD1-207ENST00000470776 GRAPLQ8TC17 118 aaPredicted RBP10.86□□□□□ -0.67
LMCD1-207ENST00000470776 XAGE2Q96GT9 111 aa10.86□□□□□ -0.67
LMCD1-207ENST00000470776 HAUS7Q99871 368 aa10.86□□□□□ -0.67
LMCD1-207ENST00000470776 MINPP1Q9UNW1 487 aa10.86□□□□□ -0.67
LMCD1-207ENST00000470776 BBOX1O75936 387 aa10.85□□□□□ -0.67
LMCD1-207ENST00000470776 SEC24BO95487 1268 aa10.85□□□□□ -0.67
LMCD1-207ENST00000470776 UBE4AQ14139 1066 aa10.85□□□□□ -0.67
LMCD1-207ENST00000470776 CNTROBQ8N137 903 aa10.85□□□□□ -0.67
LMCD1-207ENST00000470776 EVI5LQ96CN4 794 aa10.85□□□□□ -0.67
LMCD1-207ENST00000470776 RBM17Q96I25 401 aaKnown RBP10.85□□□□□ -0.67
LMCD1-207ENST00000470776 NEUROD6Q96NK8 337 aa10.85□□□□□ -0.67
LMCD1-207ENST00000470776 COL4A1P02462 1669 aa10.85□□□□□ -0.67
LMCD1-207ENST00000470776 TNRC6CQ9HCJ0 1690 aaKnown RBP10.85□□□□□ -0.67
LMCD1-207ENST00000470776 SLC5A1P13866 664 aa10.84□□□□□ -0.67
LMCD1-207ENST00000470776 CHMLP26374 656 aa10.84□□□□□ -0.67
LMCD1-207ENST00000470776 ADORA1P30542 326 aa10.84□□□□□ -0.67
LMCD1-207ENST00000470776 PDE6BP35913 854 aa10.84□□□□□ -0.67
LMCD1-207ENST00000470776 CCDC158Q5M9N0 1113 aa10.84□□□□□ -0.67
LMCD1-207ENST00000470776 TMC4Q7Z404 712 aa10.84□□□□□ -0.67
LMCD1-207ENST00000470776 RPGRQ92834 1020 aaKnown RBP10.84□□□□□ -0.67
LMCD1-207ENST00000470776 ANKRD2Q9GZV1 360 aa10.84□□□□□ -0.67
LMCD1-207ENST00000470776 BCL11AQ9H165 835 aa10.84□□□□□ -0.67
LMCD1-207ENST00000470776 BOLA2Q9H3K6 86 aa10.84□□□□□ -0.67
LMCD1-207ENST00000470776 RFX7Q2KHR2 1363 aa10.83□□□□□ -0.68
LMCD1-207ENST00000470776 TRIM6-TRIM34B2RNG4 842 aa10.83□□□□□ -0.68
LMCD1-207ENST00000470776 IFIT1P09914 478 aaKnown RBP10.83□□□□□ -0.68
LMCD1-207ENST00000470776 SRGNP10124 158 aa10.83□□□□□ -0.68
LMCD1-207ENST00000470776 HELBQ8NG08 1087 aaPredicted RBP10.83□□□□□ -0.68
LMCD1-207ENST00000470776 EPB41L2O43491 1005 aaKnown RBP10.82□□□□□ -0.68
LMCD1-207ENST00000470776 TAF5LO75529 589 aa10.82□□□□□ -0.68
LMCD1-207ENST00000470776 UQCRFS1P1P0C7P4 283 aa10.82□□□□□ -0.68
LMCD1-207ENST00000470776 NPR1P16066 1061 aa10.82□□□□□ -0.68
LMCD1-207ENST00000470776 ARID4AP29374 1257 aaPredicted RBP10.82□□□□□ -0.68
LMCD1-207ENST00000470776 MSL1Q68DK7 614 aa10.82□□□□□ -0.68
LMCD1-207ENST00000470776 CASC1Q6TDU7 716 aa10.82□□□□□ -0.68
LMCD1-207ENST00000470776 C15orf52Q6ZUT6 534 aaKnown RBP10.82□□□□□ -0.68
LMCD1-207ENST00000470776 RILPL2Q969X0 211 aa10.82□□□□□ -0.68
LMCD1-207ENST00000470776 LEMD3Q9Y2U8 911 aa10.82□□□□□ -0.68
LMCD1-207ENST00000470776 HIP1O00291 1037 aa10.81□□□□□ -0.68
LMCD1-207ENST00000470776 ALDH1B1P30837 517 aa10.81□□□□□ -0.68
LMCD1-207ENST00000470776 TTC39AQ5SRH9 613 aa10.81□□□□□ -0.68
LMCD1-207ENST00000470776 CCDC102BQ68D86 513 aa10.81□□□□□ -0.68
LMCD1-207ENST00000470776 STYK1Q6J9G0 422 aa10.81□□□□□ -0.68
LMCD1-207ENST00000470776 FBXO33Q7Z6M2 555 aa10.81□□□□□ -0.68
LMCD1-207ENST00000470776 SP8Q8IXZ3 490 aa10.81□□□□□ -0.68
LMCD1-207ENST00000470776 MASTLQ96GX5 879 aa10.81□□□□□ -0.68
LMCD1-207ENST00000470776 SNRKQ9NRH2 765 aa10.81□□□□□ -0.68
LMCD1-207ENST00000470776 PODXL2Q9NZ53 605 aa10.81□□□□□ -0.68
LMCD1-207ENST00000470776 DAXXQ9UER7 740 aaPredicted RBP10.81□□□□□ -0.68
LMCD1-207ENST00000470776 ZNF804BA4D1E1 1349 aa10.81□□□□□ -0.68
LMCD1-207ENST00000470776 IRS2Q9Y4H2 1338 aa10.81□□□□□ -0.68
LMCD1-207ENST00000470776 SNAP23O00161 211 aa10.8□□□□□ -0.68
LMCD1-207ENST00000470776 MAP4K4O95819 1239 aaPredicted RBP10.8□□□□□ -0.68
LMCD1-207ENST00000470776 PHKA1P46020 1223 aa10.8□□□□□ -0.68
LMCD1-207ENST00000470776 GORABQ5T7V8 394 aa10.8□□□□□ -0.68
LMCD1-207ENST00000470776 KBTBD3Q8NAB2 608 aa10.8□□□□□ -0.68
LMCD1-207ENST00000470776 TBC1D32Q96NH3 1257 aa10.8□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 112.9 ms