RNA–Protein interactions for RNA: ENST00000469717.5

TPM3-215, Transcript of tropomyosin 3, humanhuman

TSL 2

Gene TPM3, Length 4,041 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-215ENST00000469717 TBC1D8O95759 1140 aa9.28□□□□□ -0.92
TPM3-215ENST00000469717 TAF7Q15545 349 aaPredicted RBP9.28□□□□□ -0.92
TPM3-215ENST00000469717 ZSCAN26Q16670 478 aa9.28□□□□□ -0.92
TPM3-215ENST00000469717 FOXR1Q6PIV2 292 aa9.28□□□□□ -0.92
TPM3-215ENST00000469717 ZSWIM4Q9H7M6 989 aa9.28□□□□□ -0.92
TPM3-215ENST00000469717 HECW2Q9P2P5 1572 aa9.28□□□□□ -0.92
TPM3-215ENST00000469717 A0A1B0GVL5 298 aa9.28□□□□□ -0.92
TPM3-215ENST00000469717 POLA2Q14181 598 aa9.28□□□□□ -0.92
TPM3-215ENST00000469717 HSP90AA4PQ58FG1 418 aa9.28□□□□□ -0.92
TPM3-215ENST00000469717 CCDC30Q5VVM6 783 aa9.28□□□□□ -0.92
TPM3-215ENST00000469717 BOLA2Q9H3K6 86 aa9.28□□□□□ -0.92
TPM3-215ENST00000469717 WASLO00401 505 aaPredicted RBP9.27□□□□□ -0.93
TPM3-215ENST00000469717 GLRX3O76003 335 aaKnown RBP9.27□□□□□ -0.93
TPM3-215ENST00000469717 ADAMTS2O95450 1211 aa9.27□□□□□ -0.93
TPM3-215ENST00000469717 ATP1A3P13637 1013 aa9.27□□□□□ -0.93
TPM3-215ENST00000469717 PDCP20941 246 aa9.27□□□□□ -0.93
TPM3-215ENST00000469717 REXO1L1PQ8IX06 675 aa9.27□□□□□ -0.93
TPM3-215ENST00000469717 HTATSF1O43719 755 aaKnown RBP9.27□□□□□ -0.93
TPM3-215ENST00000469717 KCNA6P17658 529 aa9.27□□□□□ -0.93
TPM3-215ENST00000469717 LMOD1P29536 600 aaPredicted RBP9.27□□□□□ -0.93
TPM3-215ENST00000469717 ADD1P35611 737 aaKnown RBP9.27□□□□□ -0.93
TPM3-215ENST00000469717 LMAN1P49257 510 aa9.27□□□□□ -0.93
TPM3-215ENST00000469717 GNL2Q13823 731 aaKnown RBP9.27□□□□□ -0.93
TPM3-215ENST00000469717 TM6SF1Q9BZW5 370 aa9.27□□□□□ -0.93
TPM3-215ENST00000469717 RPS6KB1P23443 525 aa9.27□□□□□ -0.93
TPM3-215ENST00000469717 AACSQ86V21 672 aa9.27□□□□□ -0.93
TPM3-215ENST00000469717 FSIP1Q8NA03 581 aa9.27□□□□□ -0.93
TPM3-215ENST00000469717 MAP4K1Q92918 833 aa9.27□□□□□ -0.93
TPM3-215ENST00000469717 PI4KAP2A4QPH2 592 aa9.26□□□□□ -0.93
TPM3-215ENST00000469717 H3BQF6 201 aa9.26□□□□□ -0.93
TPM3-215ENST00000469717 CLGNO14967 610 aa9.26□□□□□ -0.93
TPM3-215ENST00000469717 EPB41L2O43491 1005 aaKnown RBP9.26□□□□□ -0.93
TPM3-215ENST00000469717 NEMFO60524 1076 aa9.26□□□□□ -0.93
TPM3-215ENST00000469717 EVCP57679 992 aa9.26□□□□□ -0.93
TPM3-215ENST00000469717 SMC1AQ14683 1233 aaKnown RBP9.26□□□□□ -0.93
TPM3-215ENST00000469717 TEX35Q5T0J7 233 aa9.26□□□□□ -0.93
TPM3-215ENST00000469717 HDGFL1Q5TGJ6 251 aa9.26□□□□□ -0.93
TPM3-215ENST00000469717 MEX3CQ5U5Q3 659 aaKnown RBP9.26□□□□□ -0.93
TPM3-215ENST00000469717 CCDC129Q6ZRS4 1044 aa9.26□□□□□ -0.93
TPM3-215ENST00000469717 PI4KAP1Q8N8J0 262 aa9.26□□□□□ -0.93
TPM3-215ENST00000469717 RGS22Q8NE09 1264 aa9.26□□□□□ -0.93
TPM3-215ENST00000469717 MNS1Q8NEH6 495 aa9.26□□□□□ -0.93
TPM3-215ENST00000469717 KLHDC4Q8TBB5 520 aa9.26□□□□□ -0.93
TPM3-215ENST00000469717 TOMM22Q9NS69 142 aa9.26□□□□□ -0.93
TPM3-215ENST00000469717 PRR36Q9H6K5 1346 aa9.26□□□□□ -0.93
TPM3-215ENST00000469717 XRN1Q8IZH2 1706 aaKnown RBP9.26□□□□□ -0.93
TPM3-215ENST00000469717 TADA3O75528 432 aa9.26□□□□□ -0.93
TPM3-215ENST00000469717 SFPQP23246 707 aaKnown RBP eCLIP9.26□□□□□ -0.93
TPM3-215ENST00000469717 ME1P48163 572 aa9.26□□□□□ -0.93
TPM3-215ENST00000469717 RUFY2Q8WXA3 655 aa9.26□□□□□ -0.93
TPM3-215ENST00000469717 RASSF4Q9H2L5 321 aa9.26□□□□□ -0.93
TPM3-215ENST00000469717 NCOA5Q9HCD5 579 aaKnown RBP9.26□□□□□ -0.93
TPM3-215ENST00000469717 CCDC61Q9Y6R9 512 aa9.26□□□□□ -0.93
TPM3-215ENST00000469717 KINO60870 393 aaKnown RBP9.26□□□□□ -0.93
TPM3-215ENST00000469717 LTKP29376 864 aa9.26□□□□□ -0.93
TPM3-215ENST00000469717 CCT2P78371 535 aaKnown RBP9.26□□□□□ -0.93
TPM3-215ENST00000469717 OTUD7BQ6GQQ9 843 aa9.26□□□□□ -0.93
TPM3-215ENST00000469717 TRIM65Q6PJ69 517 aa9.26□□□□□ -0.93
TPM3-215ENST00000469717 DPF2Q92785 391 aa9.26□□□□□ -0.93
TPM3-215ENST00000469717 DDX17Q92841 729 aaKnown RBP9.26□□□□□ -0.93
TPM3-215ENST00000469717 PLEKHA4Q9H4M7 779 aa9.26□□□□□ -0.93
TPM3-215ENST00000469717 ECHDC1Q9NTX5 307 aa9.26□□□□□ -0.93
TPM3-215ENST00000469717 ALKQ9UM73 1620 aa9.26□□□□□ -0.93
TPM3-215ENST00000469717 NPHP4O75161 1426 aaPredicted RBP9.25□□□□□ -0.93
TPM3-215ENST00000469717 DHX16O60231 1041 aaKnown RBP9.25□□□□□ -0.93
TPM3-215ENST00000469717 TFRCP02786 760 aaKnown RBP9.25□□□□□ -0.93
TPM3-215ENST00000469717 ETF1P62495 437 aaKnown RBP9.25□□□□□ -0.93
TPM3-215ENST00000469717 UTP14AQ9BVJ6 771 aaKnown RBP9.25□□□□□ -0.93
TPM3-215ENST00000469717 SKIDA1Q1XH10 827 aa9.25□□□□□ -0.93
TPM3-215ENST00000469717 CEP57L1Q8IYX8 460 aa9.25□□□□□ -0.93
TPM3-215ENST00000469717 CLASRPQ8N2M8 674 aaKnown RBP9.25□□□□□ -0.93
TPM3-215ENST00000469717 KCNB2Q92953 911 aa9.25□□□□□ -0.93
TPM3-215ENST00000469717 WDR24Q96S15 920 aa9.25□□□□□ -0.93
TPM3-215ENST00000469717 SDF4Q9BRK5 362 aa9.25□□□□□ -0.93
TPM3-215ENST00000469717 A0A0G2JLW4 131 aa9.25□□□□□ -0.93
TPM3-215ENST00000469717 SCRN1Q12765 414 aa9.25□□□□□ -0.93
TPM3-215ENST00000469717 CC2D1AQ6P1N0 951 aaPredicted RBP9.25□□□□□ -0.93
TPM3-215ENST00000469717 CCDC73Q6ZRK6 1079 aa9.25□□□□□ -0.93
TPM3-215ENST00000469717 Q6ZUG5 572 aa9.25□□□□□ -0.93
TPM3-215ENST00000469717 ENGASEQ8NFI3 743 aa9.25□□□□□ -0.93
TPM3-215ENST00000469717 SUGCTQ9HAC7 445 aa9.25□□□□□ -0.93
TPM3-215ENST00000469717 PARP3Q9Y6F1 533 aa9.25□□□□□ -0.93
TPM3-215ENST00000469717 NOP2P46087 812 aaKnown RBP9.24□□□□□ -0.93
TPM3-215ENST00000469717 NBPF6Q5VWK0 638 aa9.24□□□□□ -0.93
TPM3-215ENST00000469717 WWC2Q6AWC2 1192 aa9.24□□□□□ -0.93
TPM3-215ENST00000469717 IL17REQ8NFR9 667 aa9.24□□□□□ -0.93
TPM3-215ENST00000469717 CABLES1Q8TDN4 633 aa9.24□□□□□ -0.93
TPM3-215ENST00000469717 EAF2Q96CJ1 260 aaPredicted RBP9.24□□□□□ -0.93
TPM3-215ENST00000469717 NBPF4Q96M43 638 aa9.24□□□□□ -0.93
TPM3-215ENST00000469717 FSD1Q9BTV5 496 aa9.24□□□□□ -0.93
TPM3-215ENST00000469717 OSBPL5Q9H0X9 879 aaPredicted RBP9.24□□□□□ -0.93
TPM3-215ENST00000469717 ATG3Q9NT62 314 aa9.24□□□□□ -0.93
TPM3-215ENST00000469717 GJB4Q9NTQ9 266 aa9.24□□□□□ -0.93
TPM3-215ENST00000469717 ANO10Q9NW15 660 aa9.24□□□□□ -0.93
TPM3-215ENST00000469717 SETD1AO15047 1707 aaKnown RBP9.24□□□□□ -0.93
TPM3-215ENST00000469717 COL15A1P39059 1388 aa9.24□□□□□ -0.93
TPM3-215ENST00000469717 N4BP1O75113 896 aaKnown RBP9.24□□□□□ -0.93
TPM3-215ENST00000469717 CHST3Q7LGC8 479 aa9.24□□□□□ -0.93
TPM3-215ENST00000469717 EYA1Q99502 592 aa9.24□□□□□ -0.93
TPM3-215ENST00000469717 CHPF2Q9P2E5 772 aa9.24□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 67.6 ms