RNA–Protein interactions for RNA: ENST00000469358.5

VARS2-205, Transcript of valyl-tRNA synthetase 2, mitochondrial, humanhuman

TSL 5

Gene VARS2, Length 3,429 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS2-205ENST00000469358 NOL12Q9UGY1 213 aaKnown RBP eCLIP14.25□□□□□ -0.137e-11■■■■□ 20.4
VARS2-205ENST00000469358 V9GYY5 206 aaPredicted RBP14.25□□□□□ -0.13
VARS2-205ENST00000469358 KDM3BQ7LBC6 1761 aa14.25□□□□□ -0.13
VARS2-205ENST00000469358 NEXNQ0ZGT2 675 aa14.25□□□□□ -0.13
VARS2-205ENST00000469358 FILIP1Q7Z7B0 1213 aa14.25□□□□□ -0.13
VARS2-205ENST00000469358 PLA2G4DQ86XP0 818 aa14.25□□□□□ -0.13
VARS2-205ENST00000469358 SYTL4Q96C24 671 aaPredicted RBP14.25□□□□□ -0.13
VARS2-205ENST00000469358 TNNT1P13805 278 aa14.25□□□□□ -0.13
VARS2-205ENST00000469358 DDX19AQ9NUU7 478 aaKnown RBP14.25□□□□□ -0.13
VARS2-205ENST00000469358 TIMM10P62072 90 aa14.24□□□□□ -0.13
VARS2-205ENST00000469358 SMAP1Q8IYB5 467 aaPredicted RBP14.24□□□□□ -0.13
VARS2-205ENST00000469358 KCNH5Q8NCM2 988 aa14.24□□□□□ -0.13
VARS2-205ENST00000469358 NFAT5O94916 1531 aa14.24□□□□□ -0.13
VARS2-205ENST00000469358 GOLIM4O00461 696 aa14.24□□□□□ -0.13
VARS2-205ENST00000469358 UTYO14607 1347 aa14.24□□□□□ -0.13
VARS2-205ENST00000469358 CTDNEP1O95476 244 aa14.24□□□□□ -0.13
VARS2-205ENST00000469358 DDX17Q92841 729 aaKnown RBP14.24□□□□□ -0.13
VARS2-205ENST00000469358 USP28Q96RU2 1077 aa14.24□□□□□ -0.13
VARS2-205ENST00000469358 SNRKQ9NRH2 765 aa14.24□□□□□ -0.13
VARS2-205ENST00000469358 NLRP2Q9NX02 1062 aa14.24□□□□□ -0.13
VARS2-205ENST00000469358 TRMT1Q9NXH9 659 aaKnown RBP14.24□□□□□ -0.13
VARS2-205ENST00000469358 ARHGAP23Q9P227 1491 aa14.24□□□□□ -0.13
VARS2-205ENST00000469358 HEG1Q9ULI3 1381 aa14.24□□□□□ -0.13
VARS2-205ENST00000469358 CCAR1Q8IX12 1150 aaKnown RBP14.24□□□□□ -0.13
VARS2-205ENST00000469358 ADD1P35611 737 aaKnown RBP14.23□□□□□ -0.13
VARS2-205ENST00000469358 RFX5P48382 616 aaPredicted RBP14.23□□□□□ -0.13
VARS2-205ENST00000469358 NCBP1Q09161 790 aaKnown RBP14.23□□□□□ -0.13
VARS2-205ENST00000469358 TPD52L1Q16890 204 aaPredicted RBP14.23□□□□□ -0.13
VARS2-205ENST00000469358 TTLL5Q6EMB2 1281 aa14.23□□□□□ -0.13
VARS2-205ENST00000469358 ANKRD13DQ6ZTN6 518 aa14.23□□□□□ -0.13
VARS2-205ENST00000469358 TDRD7Q8NHU6 1098 aaKnown RBP14.23□□□□□ -0.13
VARS2-205ENST00000469358 GJB4Q9NTQ9 266 aa14.23□□□□□ -0.13
VARS2-205ENST00000469358 A0A087WZG4 1122 aa14.23□□□□□ -0.13
VARS2-205ENST00000469358 USPL1Q5W0Q7 1092 aa14.22□□□□□ -0.13
VARS2-205ENST00000469358 METTL22Q9BUU2 404 aaPredicted RBP14.22□□□□□ -0.13
VARS2-205ENST00000469358 SLIT1O75093 1534 aa14.22□□□□□ -0.13
VARS2-205ENST00000469358 PTPDC1A2A3K4 754 aa14.22□□□□□ -0.13
VARS2-205ENST00000469358 ATP5JP18859 108 aa14.22□□□□□ -0.13
VARS2-205ENST00000469358 HSP90AB3PQ58FF7 597 aa14.22□□□□□ -0.13
VARS2-205ENST00000469358 LMBR1LQ6UX01 489 aa14.22□□□□□ -0.13
VARS2-205ENST00000469358 RBM43Q6ZSC3 357 aaKnown RBP14.22□□□□□ -0.13
VARS2-205ENST00000469358 HMG20BQ9P0W2 317 aa14.22□□□□□ -0.13
VARS2-205ENST00000469358 IQCB1Q15051 598 aa14.22□□□□□ -0.13
VARS2-205ENST00000469358 NSUN7Q8NE18 718 aaKnown RBP14.22□□□□□ -0.13
VARS2-205ENST00000469358 ZNF594Q96JF6 807 aaPredicted RBP14.22□□□□□ -0.13
VARS2-205ENST00000469358 CHMP4AQ9BY43 222 aa14.22□□□□□ -0.13
VARS2-205ENST00000469358 TPM3P06753 285 aa14.21□□□□□ -0.13
VARS2-205ENST00000469358 MCMDC2Q4G0Z9 681 aa14.21□□□□□ -0.13
VARS2-205ENST00000469358 GOLGA6L19H0YKK7 550 aa14.21□□□□□ -0.14
VARS2-205ENST00000469358 NPHP1O15259 732 aa14.21□□□□□ -0.14
VARS2-205ENST00000469358 ANKRD7Q92527 254 aa14.21□□□□□ -0.14
VARS2-205ENST00000469358 HDAC5Q9UQL6 1122 aa14.21□□□□□ -0.14
VARS2-205ENST00000469358 ME1P48163 572 aa14.2□□□□□ -0.14
VARS2-205ENST00000469358 HAND2P61296 217 aa14.2□□□□□ -0.14
VARS2-205ENST00000469358 TSGA10IPQ3SY00 556 aa14.2□□□□□ -0.14
VARS2-205ENST00000469358 CABLES1Q8TDN4 633 aa14.2□□□□□ -0.14
VARS2-205ENST00000469358 COPRSQ9NQ92 184 aa14.2□□□□□ -0.14
VARS2-205ENST00000469358 CTIFO43310 598 aaKnown RBP14.2□□□□□ -0.14
VARS2-205ENST00000469358 ILDR1Q86SU0 546 aaPredicted RBP14.2□□□□□ -0.14
VARS2-205ENST00000469358 CCDC85AQ96PX6 553 aaPredicted RBP14.2□□□□□ -0.14
VARS2-205ENST00000469358 SNW1Q13573 536 aaKnown RBP14.19□□□□□ -0.14
VARS2-205ENST00000469358 SLC52A2Q9HAB3 445 aa14.19□□□□□ -0.14
VARS2-205ENST00000469358 A0A1B0GVL5 298 aa14.19□□□□□ -0.14
VARS2-205ENST00000469358 BIN1O00499 593 aa14.19□□□□□ -0.14
VARS2-205ENST00000469358 POLR3DP05423 398 aaPredicted RBP14.19□□□□□ -0.14
VARS2-205ENST00000469358 ISM2Q6H9L7 571 aa14.19□□□□□ -0.14
VARS2-205ENST00000469358 FMNL2Q96PY5 1086 aa14.19□□□□□ -0.14
VARS2-205ENST00000469358 BECN2A8MW95 431 aa14.19□□□□□ -0.14
VARS2-205ENST00000469358 KRT32Q14532 448 aa14.19□□□□□ -0.14
VARS2-205ENST00000469358 LRRC8AQ8IWT6 810 aa14.19□□□□□ -0.14
VARS2-205ENST00000469358 AOPEPQ8N6M6 819 aa14.19□□□□□ -0.14
VARS2-205ENST00000469358 FSIP1Q8NA03 581 aa14.19□□□□□ -0.14
VARS2-205ENST00000469358 RAPGEF4Q8WZA2 1011 aa14.19□□□□□ -0.14
VARS2-205ENST00000469358 U3KPZ7 1027 aaPredicted RBP14.19□□□□□ -0.14
VARS2-205ENST00000469358 JCADQ9P266 1359 aa14.18□□□□□ -0.14
VARS2-205ENST00000469358 TRHP20396 242 aaPredicted RBP14.18□□□□□ -0.14
VARS2-205ENST00000469358 DMTNQ08495 405 aa14.18□□□□□ -0.14
VARS2-205ENST00000469358 CHRNA2Q15822 529 aa14.18□□□□□ -0.14
VARS2-205ENST00000469358 HAUS7Q99871 368 aa14.18□□□□□ -0.14
VARS2-205ENST00000469358 ALDH8A1Q9H2A2 487 aaPredicted RBP14.18□□□□□ -0.14
VARS2-205ENST00000469358 SKILP12757 684 aa14.18□□□□□ -0.14
VARS2-205ENST00000469358 PTPN21Q16825 1174 aa14.18□□□□□ -0.14
VARS2-205ENST00000469358 LRRC24Q50LG9 513 aa14.18□□□□□ -0.14
VARS2-205ENST00000469358 LRP10Q7Z4F1 713 aa14.18□□□□□ -0.14
VARS2-205ENST00000469358 CFAP45Q9UL16 551 aa14.18□□□□□ -0.14
VARS2-205ENST00000469358 DHX32Q7L7V1 743 aaKnown RBP14.18□□□□□ -0.14
VARS2-205ENST00000469358 DHX40Q8IX18 779 aaKnown RBP14.18□□□□□ -0.14
VARS2-205ENST00000469358 SMARCC2Q8TAQ2 1214 aa14.18□□□□□ -0.14
VARS2-205ENST00000469358 PFKFB2O60825 505 aa14.17□□□□□ -0.14
VARS2-205ENST00000469358 CCDC112Q8NEF3 446 aa14.17□□□□□ -0.14
VARS2-205ENST00000469358 KDM6AO15550 1401 aaPredicted RBP14.17□□□□□ -0.14
VARS2-205ENST00000469358 CCDC69A6NI79 296 aa14.17□□□□□ -0.14
VARS2-205ENST00000469358 E7EWF7 191 aa14.17□□□□□ -0.14
VARS2-205ENST00000469358 CEP135Q66GS9 1140 aa14.17□□□□□ -0.14
VARS2-205ENST00000469358 KBTBD3Q8NAB2 608 aa14.17□□□□□ -0.14
VARS2-205ENST00000469358 LMO7Q8WWI1 1683 aa14.17□□□□□ -0.14
VARS2-205ENST00000469358 CSB-PGBD3P0DP91 1061 aa14.16□□□□□ -0.14
VARS2-205ENST00000469358 CCDC73Q6ZRK6 1079 aa14.16□□□□□ -0.14
VARS2-205ENST00000469358 PUS3Q9BZE2 481 aaKnown RBP14.16□□□□□ -0.14
VARS2-205ENST00000469358 KINO60870 393 aaKnown RBP14.16□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms