RNA–Protein interactions for RNA: ENST00000468894.1

XRN1-207, Transcript of 5'-3' exoribonuclease 1, humanhuman

TSL 3

Gene XRN1, Length 318 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRN1-207ENST00000468894 C8orf86Q6ZUL3 223 aa9.91□□□□□ -0.82
XRN1-207ENST00000468894 SND1Q7KZF4 910 aaKnown RBP eCLIP9.91□□□□□ -0.82
XRN1-207ENST00000468894 MICALL1Q8N3F8 863 aa9.91□□□□□ -0.82
XRN1-207ENST00000468894 CITED4Q96RK1 184 aa9.91□□□□□ -0.82
XRN1-207ENST00000468894 KANSL3Q9P2N6 904 aa9.91□□□□□ -0.82
XRN1-207ENST00000468894 CNTNAP5Q8WYK1 1306 aa9.9□□□□□ -0.82
XRN1-207ENST00000468894 LOC102724428A0A0B4J2F2 783 aa9.9□□□□□ -0.82
XRN1-207ENST00000468894 KIF4AO95239 1232 aa9.9□□□□□ -0.82
XRN1-207ENST00000468894 EIF2AK2P19525 551 aaKnown RBP9.9□□□□□ -0.82
XRN1-207ENST00000468894 SIK1P57059 783 aa9.9□□□□□ -0.82
XRN1-207ENST00000468894 LINC00114Q6XXX2 140 aa9.9□□□□□ -0.82
XRN1-207ENST00000468894 PHF20L1A8MW92 1017 aa9.89□□□□□ -0.83
XRN1-207ENST00000468894 PHACTR2O75167 634 aa9.89□□□□□ -0.83
XRN1-207ENST00000468894 MAPK1P28482 360 aa9.89□□□□□ -0.83
XRN1-207ENST00000468894 HYAL2Q12891 473 aa9.89□□□□□ -0.83
XRN1-207ENST00000468894 PDE3BQ13370 1112 aa9.89□□□□□ -0.83
XRN1-207ENST00000468894 COL9A3Q14050 684 aaPredicted RBP9.89□□□□□ -0.83
XRN1-207ENST00000468894 TMC7Q7Z402 723 aa9.89□□□□□ -0.83
XRN1-207ENST00000468894 NUDT8Q8WV74 236 aa9.89□□□□□ -0.83
XRN1-207ENST00000468894 PRDM6Q9NQX0 595 aa9.89□□□□□ -0.83
XRN1-207ENST00000468894 FRRS1LQ9P0K9 344 aa9.89□□□□□ -0.83
XRN1-207ENST00000468894 MKL2Q9ULH7 1088 aa9.89□□□□□ -0.83
XRN1-207ENST00000468894 CES1P23141 567 aa9.88□□□□□ -0.83
XRN1-207ENST00000468894 PODNQ7Z5L7 613 aa9.88□□□□□ -0.83
XRN1-207ENST00000468894 SCARF2Q96GP6 870 aaPredicted RBP9.88□□□□□ -0.83
XRN1-207ENST00000468894 JPH1Q9HDC5 661 aaPredicted RBP9.88□□□□□ -0.83
XRN1-207ENST00000468894 EREGO14944 169 aa9.87□□□□□ -0.83
XRN1-207ENST00000468894 ELMSAN1Q6PJG2 1045 aa9.87□□□□□ -0.83
XRN1-207ENST00000468894 TMC1Q8TDI8 760 aa9.87□□□□□ -0.83
XRN1-207ENST00000468894 SMG9Q9H0W8 520 aaKnown RBP9.87□□□□□ -0.83
XRN1-207ENST00000468894 NID1P14543 1247 aa9.86□□□□□ -0.83
XRN1-207ENST00000468894 ATP11AP98196 1134 aa9.86□□□□□ -0.83
XRN1-207ENST00000468894 ORC1Q13415 861 aa9.86□□□□□ -0.83
XRN1-207ENST00000468894 BEND7Q8N7W2 519 aaPredicted RBP9.86□□□□□ -0.83
XRN1-207ENST00000468894 PLD4Q96BZ4 506 aa9.86□□□□□ -0.83
XRN1-207ENST00000468894 TRIM11Q96F44 468 aa9.86□□□□□ -0.83
XRN1-207ENST00000468894 DMRTB1Q96MA1 342 aa9.86□□□□□ -0.83
XRN1-207ENST00000468894 SALL4Q9UJQ4 1053 aa9.86□□□□□ -0.83
XRN1-207ENST00000468894 GNB5O14775 395 aa9.85□□□□□ -0.83
XRN1-207ENST00000468894 LILRB5O75023 590 aa9.85□□□□□ -0.83
XRN1-207ENST00000468894 RGS9O75916 674 aaPredicted RBP9.85□□□□□ -0.83
XRN1-207ENST00000468894 GHRHP01286 108 aa9.85□□□□□ -0.83
XRN1-207ENST00000468894 ACPPP15309 386 aa9.85□□□□□ -0.83
XRN1-207ENST00000468894 AFF1P51825 1210 aaKnown RBP9.85□□□□□ -0.83
XRN1-207ENST00000468894 GRIK5Q16478 980 aa9.85□□□□□ -0.83
XRN1-207ENST00000468894 NCAPG2Q86XI2 1143 aa9.85□□□□□ -0.83
XRN1-207ENST00000468894 ALKBH8Q96BT7 664 aaKnown RBP9.85□□□□□ -0.83
XRN1-207ENST00000468894 SUV39H2Q9H5I1 410 aa9.85□□□□□ -0.83
XRN1-207ENST00000468894 ZFYVE28Q9HCC9 887 aa9.85□□□□□ -0.83
XRN1-207ENST00000468894 CEP120Q8N960 986 aa9.84□□□□□ -0.83
XRN1-207ENST00000468894 TTC9Q92623 222 aa9.84□□□□□ -0.83
XRN1-207ENST00000468894 NIF3L1Q9GZT8 377 aa9.84□□□□□ -0.83
XRN1-207ENST00000468894 GZF1Q9H116 711 aaPredicted RBP9.84□□□□□ -0.83
XRN1-207ENST00000468894 RNF225M0QZC1 329 aaPredicted RBP9.83□□□□□ -0.84
XRN1-207ENST00000468894 GSK3AP49840 483 aa9.83□□□□□ -0.84
XRN1-207ENST00000468894 USPL1Q5W0Q7 1092 aa9.83□□□□□ -0.84
XRN1-207ENST00000468894 PMEPA1Q969W9 287 aa9.83□□□□□ -0.84
XRN1-207ENST00000468894 ASB16Q96NS5 453 aa9.83□□□□□ -0.84
XRN1-207ENST00000468894 RASSF4Q9H2L5 321 aa9.83□□□□□ -0.84
XRN1-207ENST00000468894 AMOTL2Q9Y2J4 779 aa9.83□□□□□ -0.84
XRN1-207ENST00000468894 TREHO43280 583 aa9.82□□□□□ -0.84
XRN1-207ENST00000468894 IRS1P35568 1242 aa9.82□□□□□ -0.84
XRN1-207ENST00000468894 DSC3Q14574 896 aa9.82□□□□□ -0.84
XRN1-207ENST00000468894 SPACA7Q96KW9 195 aa9.82□□□□□ -0.84
XRN1-207ENST00000468894 RBSNQ9H1K0 784 aa9.82□□□□□ -0.84
XRN1-207ENST00000468894 POLR3DP05423 398 aaPredicted RBP9.81□□□□□ -0.84
XRN1-207ENST00000468894 LATS2Q9NRM7 1088 aa9.81□□□□□ -0.84
XRN1-207ENST00000468894 TRIM33Q9UPN9 1127 aa9.81□□□□□ -0.84
XRN1-207ENST00000468894 EIF1AYO14602 144 aaKnown RBP9.8□□□□□ -0.84
XRN1-207ENST00000468894 COL8A1P27658 744 aa9.8□□□□□ -0.84
XRN1-207ENST00000468894 PEAR1Q5VY43 1037 aaPredicted RBP9.8□□□□□ -0.84
XRN1-207ENST00000468894 ADAMTSL4Q6UY14 1074 aa9.8□□□□□ -0.84
XRN1-207ENST00000468894 HHIPQ96QV1 700 aa9.8□□□□□ -0.84
XRN1-207ENST00000468894 PLVAPQ9BX97 442 aa9.8□□□□□ -0.84
XRN1-207ENST00000468894 PBX4Q9BYU1 374 aa9.8□□□□□ -0.84
XRN1-207ENST00000468894 NFKBIEO00221 500 aa9.79□□□□□ -0.84
XRN1-207ENST00000468894 PIK3R2O00459 728 aa9.79□□□□□ -0.84
XRN1-207ENST00000468894 CPNE3O75131 537 aaKnown RBP9.79□□□□□ -0.84
XRN1-207ENST00000468894 TRPA1O75762 1119 aa9.79□□□□□ -0.84
XRN1-207ENST00000468894 NEFLP07196 543 aa9.79□□□□□ -0.84
XRN1-207ENST00000468894 EDN3P14138 238 aa9.79□□□□□ -0.84
XRN1-207ENST00000468894 KCNMA1Q12791 1236 aa9.79□□□□□ -0.84
XRN1-207ENST00000468894 CEP135Q66GS9 1140 aa9.79□□□□□ -0.84
XRN1-207ENST00000468894 ILDR2Q71H61 639 aa9.79□□□□□ -0.84
XRN1-207ENST00000468894 ZSCAN29Q8IWY8 852 aaPredicted RBP9.79□□□□□ -0.84
XRN1-207ENST00000468894 GALNT12Q8IXK2 581 aa9.79□□□□□ -0.84
XRN1-207ENST00000468894 DZANK1Q9NVP4 752 aa9.79□□□□□ -0.84
XRN1-207ENST00000468894 BAG6P46379 1132 aa9.78□□□□□ -0.84
XRN1-207ENST00000468894 CSRNP1Q96S65 589 aa9.78□□□□□ -0.84
XRN1-207ENST00000468894 ZKSCAN3Q9BRR0 538 aa9.78□□□□□ -0.84
XRN1-207ENST00000468894 DNAJC25Q9H1X3 360 aa9.78□□□□□ -0.84
XRN1-207ENST00000468894 NOP53Q9NZM5 478 aaKnown RBP9.78□□□□□ -0.84
XRN1-207ENST00000468894 ZBTB7CA1YPR0 619 aa9.77□□□□□ -0.85
XRN1-207ENST00000468894 SMNDC1O75940 238 aaKnown RBP eCLIP9.77□□□□□ -0.85
XRN1-207ENST00000468894 FMR1Q06787 632 aaKnown RBP eCLIP9.77□□□□□ -0.85
XRN1-207ENST00000468894 MSL1Q68DK7 614 aa9.77□□□□□ -0.85
XRN1-207ENST00000468894 GDF6Q6KF10 455 aaPredicted RBP9.77□□□□□ -0.85
XRN1-207ENST00000468894 OSMRQ99650 979 aa9.77□□□□□ -0.85
XRN1-207ENST00000468894 DNAJC14Q6Y2X3 702 aaPredicted RBP9.76□□□□□ -0.85
XRN1-207ENST00000468894 POP1Q99575 1024 aaKnown RBP9.76□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 12.5 ms