RNA–Protein interactions for RNA: ENST00000468284.1

CKAP2-205, Transcript of cytoskeleton associated protein 2, humanhuman

APPRIS ALT2 TSL 3

Gene CKAP2, Length 579 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKAP2-205ENST00000468284 EIF3AQ14152 1382 aaKnown RBP13.24□□□□□ -0.29
CKAP2-205ENST00000468284 USP19O94966 1318 aa13.24□□□□□ -0.29
CKAP2-205ENST00000468284 ACEP12821 1306 aa13.24□□□□□ -0.29
CKAP2-205ENST00000468284 GCP02774 474 aa13.24□□□□□ -0.29
CKAP2-205ENST00000468284 FOXD4L5Q5VV16 416 aaPredicted RBP13.24□□□□□ -0.29
CKAP2-205ENST00000468284 KDF1Q8NAX2 398 aaPredicted RBP13.24□□□□□ -0.29
CKAP2-205ENST00000468284 ZNF526Q8TF50 670 aaPredicted RBP13.24□□□□□ -0.29
CKAP2-205ENST00000468284 CYLDQ9NQC7 956 aa13.24□□□□□ -0.29
CKAP2-205ENST00000468284 PCDHB9Q9Y5E1 797 aa13.24□□□□□ -0.29
CKAP2-205ENST00000468284 CDC14CA4D256 554 aa13.23□□□□□ -0.29
CKAP2-205ENST00000468284 TOM1L2Q6ZVM7 507 aa13.23□□□□□ -0.29
CKAP2-205ENST00000468284 WNK3Q9BYP7 1800 aa13.23□□□□□ -0.29
CKAP2-205ENST00000468284 AKAP12Q02952 1782 aa13.22□□□□□ -0.29
CKAP2-205ENST00000468284 VWA5B2Q8N398 1253 aa13.22□□□□□ -0.29
CKAP2-205ENST00000468284 ITSN1Q15811 1721 aa13.22□□□□□ -0.29
CKAP2-205ENST00000468284 BCL9O00512 1426 aa13.22□□□□□ -0.29
CKAP2-205ENST00000468284 POLR3AO14802 1390 aaPredicted RBP13.21□□□□□ -0.29
CKAP2-205ENST00000468284 FBXO45P0C2W1 286 aa13.21□□□□□ -0.29
CKAP2-205ENST00000468284 SV2AQ7L0J3 742 aa13.21□□□□□ -0.29
CKAP2-205ENST00000468284 ACSBG1Q96GR2 724 aa13.21□□□□□ -0.29
CKAP2-205ENST00000468284 MPHOSPH9Q99550 1183 aa13.21□□□□□ -0.29
CKAP2-205ENST00000468284 LRRC4BQ9NT99 713 aa13.21□□□□□ -0.29
CKAP2-205ENST00000468284 AATKQ6ZMQ8 1374 aa13.2□□□□□ -0.3
CKAP2-205ENST00000468284 RNFT1Q5M7Z0 435 aa13.2□□□□□ -0.3
CKAP2-205ENST00000468284 TOPAZ1Q8N9V7 1692 aa13.19□□□□□ -0.3
CKAP2-205ENST00000468284 CDK19Q9BWU1 502 aa13.19□□□□□ -0.3
CKAP2-205ENST00000468284 COL13A1Q5TAT6 717 aaPredicted RBP13.18□□□□□ -0.3
CKAP2-205ENST00000468284 LYSMD3Q7Z3D4 306 aa13.18□□□□□ -0.3
CKAP2-205ENST00000468284 COL18A1P39060 1754 aa13.17□□□□□ -0.3
CKAP2-205ENST00000468284 COL24A1Q17RW2 1714 aa13.17□□□□□ -0.3
CKAP2-205ENST00000468284 NLRP13Q86W25 1043 aa13.17□□□□□ -0.3
CKAP2-205ENST00000468284 PNPLA7Q6ZV29 1317 aa13.16□□□□□ -0.3
CKAP2-205ENST00000468284 NHSQ6T4R5 1651 aa13.16□□□□□ -0.3
CKAP2-205ENST00000468284 POLD1P28340 1107 aa13.16□□□□□ -0.3
CKAP2-205ENST00000468284 KCNQ4P56696 695 aa13.16□□□□□ -0.3
CKAP2-205ENST00000468284 DNAJC5GQ8N7S2 189 aa13.16□□□□□ -0.3
CKAP2-205ENST00000468284 WDR17Q8IZU2 1322 aa13.15□□□□□ -0.3
CKAP2-205ENST00000468284 ATP5J2-PTCD1G3V325 749 aa13.15□□□□□ -0.3
CKAP2-205ENST00000468284 EXOC5O00471 708 aa13.15□□□□□ -0.3
CKAP2-205ENST00000468284 GRIN3BO60391 1043 aa13.15□□□□□ -0.3
CKAP2-205ENST00000468284 ADCY9O60503 1353 aa13.15□□□□□ -0.3
CKAP2-205ENST00000468284 ARHGEF28Q8N1W1 1705 aaKnown RBP13.14□□□□□ -0.31
CKAP2-205ENST00000468284 RNF144AP50876 292 aaPredicted RBP13.14□□□□□ -0.31
CKAP2-205ENST00000468284 BRPF1P55201 1214 aaPredicted RBP13.14□□□□□ -0.31
CKAP2-205ENST00000468284 RGPD5Q99666 1765 aa13.14□□□□□ -0.31
CKAP2-205ENST00000468284 KCNMA1Q12791 1236 aa13.13□□□□□ -0.31
CKAP2-205ENST00000468284 PRICKLE2Q7Z3G6 844 aa13.13□□□□□ -0.31
CKAP2-205ENST00000468284 BTAF1O14981 1849 aa13.13□□□□□ -0.31
CKAP2-205ENST00000468284 TUBGCP6Q96RT7 1819 aa13.13□□□□□ -0.31
CKAP2-205ENST00000468284 SLIT3O75094 1523 aa13.13□□□□□ -0.31
CKAP2-205ENST00000468284 NR1H3Q13133 447 aa13.12□□□□□ -0.31
CKAP2-205ENST00000468284 RNF20Q5VTR2 975 aa13.12□□□□□ -0.31
CKAP2-205ENST00000468284 ZNF385CQ66K41 422 aaPredicted RBP13.12□□□□□ -0.31
CKAP2-205ENST00000468284 SVOPQ8N4V2 548 aa13.12□□□□□ -0.31
CKAP2-205ENST00000468284 CDCA7Q9BWT1 371 aaPredicted RBP13.12□□□□□ -0.31
CKAP2-205ENST00000468284 ADAMTS8Q9UP79 889 aa13.12□□□□□ -0.31
CKAP2-205ENST00000468284 USP6P35125 1406 aa13.12□□□□□ -0.31
CKAP2-205ENST00000468284 MEN1O00255 615 aa13.11□□□□□ -0.31
CKAP2-205ENST00000468284 SLURP2P0DP57 97 aa13.11□□□□□ -0.31
CKAP2-205ENST00000468284 RHOQP17081 205 aa13.11□□□□□ -0.31
CKAP2-205ENST00000468284 ERVK-9P63128 1117 aa13.11□□□□□ -0.31
CKAP2-205ENST00000468284 CC2D2BQ6DHV5 1058 aa13.11□□□□□ -0.31
CKAP2-205ENST00000468284 BANK1Q8NDB2 785 aa13.11□□□□□ -0.31
CKAP2-205ENST00000468284 CARD10Q9BWT7 1032 aa13.11□□□□□ -0.31
CKAP2-205ENST00000468284 WWC3Q9ULE0 1092 aa13.11□□□□□ -0.31
CKAP2-205ENST00000468284 BRD4O60885 1362 aaPredicted RBP13.1□□□□□ -0.31
CKAP2-205ENST00000468284 CSB-PGBD3P0DP91 1061 aa13.1□□□□□ -0.31
CKAP2-205ENST00000468284 MCCD1P59942 119 aaPredicted RBP13.1□□□□□ -0.31
CKAP2-205ENST00000468284 HTRA3P83110 453 aa13.1□□□□□ -0.31
CKAP2-205ENST00000468284 TNS2Q63HR2 1409 aa13.1□□□□□ -0.31
CKAP2-205ENST00000468284 QSER1Q2KHR3 1735 aa13.1□□□□□ -0.31
CKAP2-205ENST00000468284 PPIP5K1Q6PFW1 1433 aa13.09□□□□□ -0.31
CKAP2-205ENST00000468284 ZNF592Q92610 1267 aa13.09□□□□□ -0.31
CKAP2-205ENST00000468284 CUEDC1Q9NWM3 386 aaPredicted RBP13.09□□□□□ -0.31
CKAP2-205ENST00000468284 TFCP2L1Q9NZI6 479 aa13.09□□□□□ -0.31
CKAP2-205ENST00000468284 ZNF330Q9Y3S2 320 aaPredicted RBP13.09□□□□□ -0.31
CKAP2-205ENST00000468284 A0A1W2PRU2 124 aa13.08□□□□□ -0.32
CKAP2-205ENST00000468284 GPC1P35052 558 aa13.08□□□□□ -0.32
CKAP2-205ENST00000468284 GSK3AP49840 483 aa13.08□□□□□ -0.32
CKAP2-205ENST00000468284 MSL1Q68DK7 614 aa13.08□□□□□ -0.32
CKAP2-205ENST00000468284 WHAMMQ8TF30 809 aa13.08□□□□□ -0.32
CKAP2-205ENST00000468284 NDUFB9Q9Y6M9 179 aa13.08□□□□□ -0.32
CKAP2-205ENST00000468284 CPSF1Q10570 1443 aaKnown RBP13.07□□□□□ -0.32
CKAP2-205ENST00000468284 RNF225M0QZC1 329 aaPredicted RBP13.07□□□□□ -0.32
CKAP2-205ENST00000468284 ARHGEF25Q86VW2 580 aa13.07□□□□□ -0.32
CKAP2-205ENST00000468284 MTMR14Q8NCE2 650 aa13.07□□□□□ -0.32
CKAP2-205ENST00000468284 DCAF11Q8TEB1 546 aa13.07□□□□□ -0.32
CKAP2-205ENST00000468284 PIK3C2AO00443 1686 aa13.07□□□□□ -0.32
CKAP2-205ENST00000468284 TRPM1Q7Z4N2 1603 aa13.06□□□□□ -0.32
CKAP2-205ENST00000468284 PRELPP51888 382 aa13.06□□□□□ -0.32
CKAP2-205ENST00000468284 CYP2U1Q7Z449 544 aa13.06□□□□□ -0.32
CKAP2-205ENST00000468284 COL23A1Q86Y22 540 aaPredicted RBP13.06□□□□□ -0.32
CKAP2-205ENST00000468284 PCDHB11Q9Y5F2 797 aa13.06□□□□□ -0.32
CKAP2-205ENST00000468284 ABCC6O95255 1503 aa13.05□□□□□ -0.32
CKAP2-205ENST00000468284 GPR37L1O60883 481 aa13.05□□□□□ -0.32
CKAP2-205ENST00000468284 SCTRP47872 440 aa13.05□□□□□ -0.32
CKAP2-205ENST00000468284 TNS4Q8IZW8 715 aa13.05□□□□□ -0.32
CKAP2-205ENST00000468284 NLRP3Q96P20 1036 aa13.05□□□□□ -0.32
CKAP2-205ENST00000468284 APBB1O00213 710 aa13.04□□□□□ -0.32
CKAP2-205ENST00000468284 SRPK2P78362 688 aaKnown RBP13.03□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms