RNA–Protein interactions for RNA: ENST00000468039.1

U2AF1-207, Transcript of U2 small nuclear RNA auxiliary factor 1, humanhuman

TSL 5

Gene U2AF1, Length 609 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
U2AF1-207ENST00000468039 ZDHHC1Q8WTX9 485 aa7.57□□□□□ -1.2
U2AF1-207ENST00000468039 CLP1Q92989 425 aaKnown RBP7.57□□□□□ -1.2
U2AF1-207ENST00000468039 PRIMPOLQ96LW4 560 aa7.57□□□□□ -1.2
U2AF1-207ENST00000468039 NUCKS1Q9H1E3 243 aaKnown RBP7.57□□□□□ -1.2
U2AF1-207ENST00000468039 RRP7BPQ9NSQ0 103 aa7.57□□□□□ -1.2
U2AF1-207ENST00000468039 PTPRKQ15262 1439 aa7.57□□□□□ -1.2
U2AF1-207ENST00000468039 EML1O00423 815 aa7.56□□□□□ -1.2
U2AF1-207ENST00000468039 KIF3BO15066 747 aa7.56□□□□□ -1.2
U2AF1-207ENST00000468039 C21orf2O43822 256 aa7.56□□□□□ -1.2
U2AF1-207ENST00000468039 CEBPAP49715 358 aaPredicted RBP7.56□□□□□ -1.2
U2AF1-207ENST00000468039 ARTNQ5T4W7 220 aa7.56□□□□□ -1.2
U2AF1-207ENST00000468039 ZNF295-AS1Q8N0V1 137 aa7.56□□□□□ -1.2
U2AF1-207ENST00000468039 RHPN1Q8TCX5 695 aa7.56□□□□□ -1.2
U2AF1-207ENST00000468039 NGLY1Q96IV0 654 aa7.56□□□□□ -1.2
U2AF1-207ENST00000468039 C2orf49Q9BVC5 232 aaPredicted RBP7.56□□□□□ -1.2
U2AF1-207ENST00000468039 RUBCNLQ9H714 662 aa7.56□□□□□ -1.2
U2AF1-207ENST00000468039 HCN4Q9Y3Q4 1203 aa7.56□□□□□ -1.2
U2AF1-207ENST00000468039 KIF15Q9NS87 1388 aa7.56□□□□□ -1.2
U2AF1-207ENST00000468039 RRBP1Q9P2E9 1410 aaKnown RBP7.55□□□□□ -1.2
U2AF1-207ENST00000468039 TXLNAP40222 546 aa7.55□□□□□ -1.2
U2AF1-207ENST00000468039 HIRAP54198 1017 aaPredicted RBP7.55□□□□□ -1.2
U2AF1-207ENST00000468039 C1orf53Q5VUE5 145 aa7.55□□□□□ -1.2
U2AF1-207ENST00000468039 TRERF1Q96PN7 1200 aa7.55□□□□□ -1.2
U2AF1-207ENST00000468039 PHACTR1Q9C0D0 580 aa7.55□□□□□ -1.2
U2AF1-207ENST00000468039 GPC6Q9Y625 555 aaPredicted RBP7.55□□□□□ -1.2
U2AF1-207ENST00000468039 DUOX2Q9NRD8 1548 aa7.54□□□□□ -1.2
U2AF1-207ENST00000468039 YBX3P16989 372 aaKnown RBP eCLIP7.54□□□□□ -1.2
U2AF1-207ENST00000468039 ATP2B4P23634 1241 aa7.54□□□□□ -1.2
U2AF1-207ENST00000468039 GAS6Q14393 721 aa7.54□□□□□ -1.2
U2AF1-207ENST00000468039 HIF1AQ16665 826 aa7.54□□□□□ -1.2
U2AF1-207ENST00000468039 B4GALNT3Q6L9W6 998 aa7.54□□□□□ -1.2
U2AF1-207ENST00000468039 FIGNL1Q6PIW4 674 aa7.54□□□□□ -1.2
U2AF1-207ENST00000468039 ALDH16A1Q8IZ83 802 aa7.54□□□□□ -1.2
U2AF1-207ENST00000468039 CRISPLD1Q9H336 500 aa7.54□□□□□ -1.2
U2AF1-207ENST00000468039 MBIPQ9NS73 344 aa7.54□□□□□ -1.2
U2AF1-207ENST00000468039 CXXC1Q9P0U4 656 aaPredicted RBP7.54□□□□□ -1.2
U2AF1-207ENST00000468039 ANKRD30AQ9BXX3 1397 aa7.54□□□□□ -1.2
U2AF1-207ENST00000468039 NCOA1Q15788 1441 aa7.53□□□□□ -1.2
U2AF1-207ENST00000468039 A0A1W2PNR3 127 aa7.53□□□□□ -1.2
U2AF1-207ENST00000468039 TMEM88BA6NKF7 163 aa7.53□□□□□ -1.2
U2AF1-207ENST00000468039 ATP4AP20648 1035 aa7.53□□□□□ -1.2
U2AF1-207ENST00000468039 DBN1Q16643 649 aa7.53□□□□□ -1.2
U2AF1-207ENST00000468039 SH3PXD2AQ5TCZ1 1133 aa7.53□□□□□ -1.2
U2AF1-207ENST00000468039 RETREG2Q8NC44 543 aa7.53□□□□□ -1.2
U2AF1-207ENST00000468039 ZNF837Q96EG3 531 aaPredicted RBP7.53□□□□□ -1.2
U2AF1-207ENST00000468039 ANKIB1Q9P2G1 1089 aa7.53□□□□□ -1.2
U2AF1-207ENST00000468039 ADGRL2O95490 1459 aa7.53□□□□□ -1.2
U2AF1-207ENST00000468039 CLTCQ00610 1675 aaKnown RBP7.53□□□□□ -1.2
U2AF1-207ENST00000468039 PTCD1O75127 700 aaKnown RBP7.52□□□□□ -1.21
U2AF1-207ENST00000468039 POTEAQ6S8J7 498 aa7.52□□□□□ -1.21
U2AF1-207ENST00000468039 NLRP8Q86W28 1048 aa7.52□□□□□ -1.21
U2AF1-207ENST00000468039 ZIC5Q96T25 663 aa7.52□□□□□ -1.21
U2AF1-207ENST00000468039 CUEDC1Q9NWM3 386 aaPredicted RBP7.52□□□□□ -1.21
U2AF1-207ENST00000468039 MKL2Q9ULH7 1088 aa7.52□□□□□ -1.21
U2AF1-207ENST00000468039 PHF24Q9UPV7 400 aa7.52□□□□□ -1.21
U2AF1-207ENST00000468039 ERBINQ96RT1 1412 aa7.52□□□□□ -1.21
U2AF1-207ENST00000468039 C3P01024 1663 aa7.51□□□□□ -1.21
U2AF1-207ENST00000468039 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP7.51□□□□□ -1.21
U2AF1-207ENST00000468039 FKBP5Q13451 457 aaPredicted RBP7.51□□□□□ -1.21
U2AF1-207ENST00000468039 OCLNQ16625 522 aa7.51□□□□□ -1.21
U2AF1-207ENST00000468039 RTN1Q16799 776 aa7.51□□□□□ -1.21
U2AF1-207ENST00000468039 GTPBP3Q969Y2 492 aaKnown RBP7.51□□□□□ -1.21
U2AF1-207ENST00000468039 MKNK1Q9BUB5 465 aa7.51□□□□□ -1.21
U2AF1-207ENST00000468039 MTMR7Q9Y216 660 aa7.51□□□□□ -1.21
U2AF1-207ENST00000468039 MROH1Q8NDA8 1641 aa7.51□□□□□ -1.21
U2AF1-207ENST00000468039 RNF17Q9BXT8 1623 aaKnown RBP7.51□□□□□ -1.21
U2AF1-207ENST00000468039 EIF2AK4Q9P2K8 1649 aaKnown RBP7.51□□□□□ -1.21
U2AF1-207ENST00000468039 CNTLNQ9NXG0 1405 aa7.51□□□□□ -1.21
U2AF1-207ENST00000468039 ZMYM3Q14202 1370 aa7.5□□□□□ -1.21
U2AF1-207ENST00000468039 COL26A1Q96A83 441 aa7.5□□□□□ -1.21
U2AF1-207ENST00000468039 KDM5DQ9BY66 1539 aa7.5□□□□□ -1.21
U2AF1-207ENST00000468039 ANKRD50Q9ULJ7 1429 aa7.5□□□□□ -1.21
U2AF1-207ENST00000468039 WASHC2CQ9Y4E1 1318 aa7.5□□□□□ -1.21
U2AF1-207ENST00000468039 ROCK1Q13464 1354 aa7.49□□□□□ -1.21
U2AF1-207ENST00000468039 ABCC3O15438 1527 aa7.49□□□□□ -1.21
U2AF1-207ENST00000468039 LRRC69Q6ZNQ3 347 aa7.49□□□□□ -1.21
U2AF1-207ENST00000468039 PCDHGC4Q9Y5F7 938 aa7.49□□□□□ -1.21
U2AF1-207ENST00000468039 LMTK3Q96Q04 1460 aa7.49□□□□□ -1.21
U2AF1-207ENST00000468039 PRDM15P57071 1507 aaPredicted RBP7.48□□□□□ -1.21
U2AF1-207ENST00000468039 MROH2AA6NES4 1674 aa7.48□□□□□ -1.21
U2AF1-207ENST00000468039 CARNS1A5YM72 827 aa7.48□□□□□ -1.21
U2AF1-207ENST00000468039 C1QTNF9BB2RNN3 333 aa7.48□□□□□ -1.21
U2AF1-207ENST00000468039 ATXN7O15265 892 aaPredicted RBP7.48□□□□□ -1.21
U2AF1-207ENST00000468039 CEP152O94986 1710 aa7.48□□□□□ -1.21
U2AF1-207ENST00000468039 COL8A1P27658 744 aa7.48□□□□□ -1.21
U2AF1-207ENST00000468039 HSPA2P54652 639 aa7.48□□□□□ -1.21
U2AF1-207ENST00000468039 CFHR5Q9BXR6 569 aa7.48□□□□□ -1.21
U2AF1-207ENST00000468039 ZCCHC2Q9C0B9 1178 aaKnown RBP7.48□□□□□ -1.21
U2AF1-207ENST00000468039 NSFL1CQ9UNZ2 370 aaKnown RBP7.48□□□□□ -1.21
U2AF1-207ENST00000468039 ARID1BQ8NFD5 2236 aaPredicted RBP7.47□□□□□ -1.21
U2AF1-207ENST00000468039 GPR25O00155 361 aa7.47□□□□□ -1.21
U2AF1-207ENST00000468039 SSFA2P28290 1259 aa7.47□□□□□ -1.21
U2AF1-207ENST00000468039 C16orf46Q6P387 395 aa7.47□□□□□ -1.21
U2AF1-207ENST00000468039 SUSD3Q96L08 255 aa7.47□□□□□ -1.21
U2AF1-207ENST00000468039 SLAIN2Q9P270 581 aa7.47□□□□□ -1.21
U2AF1-207ENST00000468039 ATXN7L1Q9ULK2 861 aaPredicted RBP7.47□□□□□ -1.21
U2AF1-207ENST00000468039 DEPDC5O75140 1603 aa7.47□□□□□ -1.21
U2AF1-207ENST00000468039 NAIPQ13075 1403 aa7.46□□□□□ -1.21
U2AF1-207ENST00000468039 CAMSAP1Q5T5Y3 1602 aa7.46□□□□□ -1.21
U2AF1-207ENST00000468039 KHNYNO15037 678 aaKnown RBP7.46□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms