RNA–Protein interactions for RNA: ENST00000467838.2

SEC16A-208, Transcript of SEC16 homolog A, endoplasmic reticulum export factor, humanhuman

TSL 2

Gene SEC16A, Length 1,988 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC16A-208ENST00000467838 SH3TC1Q8TE82 1336 aa17.1■□□□□ 0.33
SEC16A-208ENST00000467838 CTAGE5O15320 804 aa17.09■□□□□ 0.33
SEC16A-208ENST00000467838 GCP02774 474 aa17.09■□□□□ 0.33
SEC16A-208ENST00000467838 ADD1P35611 737 aaKnown RBP17.09■□□□□ 0.33
SEC16A-208ENST00000467838 NEXNQ0ZGT2 675 aa17.09■□□□□ 0.33
SEC16A-208ENST00000467838 IQCB1Q15051 598 aa17.09■□□□□ 0.33
SEC16A-208ENST00000467838 TNNI3KQ59H18 835 aa17.09■□□□□ 0.33
SEC16A-208ENST00000467838 PPP4R3BQ5MIZ7 849 aa17.09■□□□□ 0.33
SEC16A-208ENST00000467838 BRINP3Q76B58 766 aa17.09■□□□□ 0.33
SEC16A-208ENST00000467838 BICD2Q8TD16 824 aa17.09■□□□□ 0.33
SEC16A-208ENST00000467838 ANKRD24Q8TF21 1146 aa17.09■□□□□ 0.33
SEC16A-208ENST00000467838 TRIM5Q9C035 493 aa17.09■□□□□ 0.33
SEC16A-208ENST00000467838 SLAIN2Q9P270 581 aa17.09■□□□□ 0.33
SEC16A-208ENST00000467838 FPGT-TNNI3KV9GXZ4 949 aa17.09■□□□□ 0.33
SEC16A-208ENST00000467838 PFKFB2O60825 505 aa17.09■□□□□ 0.33
SEC16A-208ENST00000467838 LRMPQ12912 555 aa17.09■□□□□ 0.33
SEC16A-208ENST00000467838 STK3Q13188 491 aa17.09■□□□□ 0.33
SEC16A-208ENST00000467838 LRP10Q7Z4F1 713 aa17.09■□□□□ 0.33
SEC16A-208ENST00000467838 MRFAP1L1Q96HT8 127 aa17.09■□□□□ 0.33
SEC16A-208ENST00000467838 ARID3AQ99856 593 aa17.09■□□□□ 0.33
SEC16A-208ENST00000467838 DNAJC25Q9H1X3 360 aa17.09■□□□□ 0.33
SEC16A-208ENST00000467838 PALLDQ8WX93 1383 aa17.08■□□□□ 0.33
SEC16A-208ENST00000467838 GLI3P10071 1580 aa17.08■□□□□ 0.33
SEC16A-208ENST00000467838 ATP2B3Q16720 1220 aa17.08■□□□□ 0.33
SEC16A-208ENST00000467838 ATL3Q6DD88 541 aa17.08■□□□□ 0.33
SEC16A-208ENST00000467838 Q6ZUG5 572 aa17.08■□□□□ 0.33
SEC16A-208ENST00000467838 RIC3Q7Z5B4 369 aa17.08■□□□□ 0.33
SEC16A-208ENST00000467838 KLHDC4Q8TBB5 520 aa17.08■□□□□ 0.33
SEC16A-208ENST00000467838 HAUS7Q99871 368 aa17.08■□□□□ 0.33
SEC16A-208ENST00000467838 AGXT2Q9BYV1 514 aa17.08■□□□□ 0.33
SEC16A-208ENST00000467838 RCOR1Q9UKL0 485 aa17.08■□□□□ 0.33
SEC16A-208ENST00000467838 ALS2Q96Q42 1657 aa17.08■□□□□ 0.32
SEC16A-208ENST00000467838 LAMB4A4D0S4 1761 aa17.08■□□□□ 0.32
SEC16A-208ENST00000467838 FAM177BA6PVY3 158 aa17.08■□□□□ 0.32
SEC16A-208ENST00000467838 CYP21A2P08686 494 aa17.08■□□□□ 0.32
SEC16A-208ENST00000467838 PTPN12Q05209 780 aaKnown RBP17.08■□□□□ 0.32
SEC16A-208ENST00000467838 ZNF790Q6PG37 636 aa17.08■□□□□ 0.32
SEC16A-208ENST00000467838 EDC3Q96F86 508 aaKnown RBP17.08■□□□□ 0.32
SEC16A-208ENST00000467838 NRBP1Q9UHY1 535 aa17.08■□□□□ 0.32
SEC16A-208ENST00000467838 RGPD5Q99666 1765 aa17.07■□□□□ 0.32
SEC16A-208ENST00000467838 SPEF2Q9C093 1822 aa17.07■□□□□ 0.32
SEC16A-208ENST00000467838 SALL1Q9NSC2 1324 aa17.07■□□□□ 0.32
SEC16A-208ENST00000467838 NEMFO60524 1076 aa17.07■□□□□ 0.32
SEC16A-208ENST00000467838 HMGB1P09429 215 aaKnown RBP17.07■□□□□ 0.32
SEC16A-208ENST00000467838 NCBP1Q09161 790 aaKnown RBP17.07■□□□□ 0.32
SEC16A-208ENST00000467838 SCRN1Q12765 414 aa17.07■□□□□ 0.32
SEC16A-208ENST00000467838 AIMP1Q12904 312 aaKnown RBP17.07■□□□□ 0.32
SEC16A-208ENST00000467838 CLIP2Q9UDT6 1046 aa17.07■□□□□ 0.32
SEC16A-208ENST00000467838 RBM6P78332 1123 aaKnown RBP17.06■□□□□ 0.32
SEC16A-208ENST00000467838 STX1AQ16623 288 aa17.06■□□□□ 0.32
SEC16A-208ENST00000467838 MCMDC2Q4G0Z9 681 aa17.06■□□□□ 0.32
SEC16A-208ENST00000467838 NSUN7Q8NE18 718 aaKnown RBP17.06■□□□□ 0.32
SEC16A-208ENST00000467838 XAGE3Q8WTP9 111 aa17.06■□□□□ 0.32
SEC16A-208ENST00000467838 CACTINQ8WUQ7 758 aaKnown RBP17.06■□□□□ 0.32
SEC16A-208ENST00000467838 GTPBP4Q9BZE4 634 aaKnown RBP17.06■□□□□ 0.32
SEC16A-208ENST00000467838 PAXBP1Q9Y5B6 917 aa17.06■□□□□ 0.32
SEC16A-208ENST00000467838 H3BQV1 296 aa17.06■□□□□ 0.32
SEC16A-208ENST00000467838 CCDC144BQ3MJ40 725 aa17.06■□□□□ 0.32
SEC16A-208ENST00000467838 IFFO2Q5TF58 517 aa17.06■□□□□ 0.32
SEC16A-208ENST00000467838 DRC7Q8IY82 874 aa17.06■□□□□ 0.32
SEC16A-208ENST00000467838 CCDC144CPQ8IYA2 1237 aa17.06■□□□□ 0.32
SEC16A-208ENST00000467838 SLC52A2Q9HAB3 445 aa17.06■□□□□ 0.32
SEC16A-208ENST00000467838 TFCP2Q12800 502 aa17.05■□□□□ 0.32
SEC16A-208ENST00000467838 STOX1Q6ZVD7 989 aa17.05■□□□□ 0.32
SEC16A-208ENST00000467838 FEZ1Q99689 392 aa17.05■□□□□ 0.32
SEC16A-208ENST00000467838 MYD88Q99836 296 aa17.05■□□□□ 0.32
SEC16A-208ENST00000467838 KCND1Q9NSA2 647 aa17.05■□□□□ 0.32
SEC16A-208ENST00000467838 C11orf57Q6ZUT1 292 aaPredicted RBP17.04■□□□□ 0.32
SEC16A-208ENST00000467838 KBTBD3Q8NAB2 608 aa17.04■□□□□ 0.32
SEC16A-208ENST00000467838 ERBB3P21860 1342 aa17.04■□□□□ 0.32
SEC16A-208ENST00000467838 LTBP4Q8N2S1 1624 aa17.04■□□□□ 0.32
SEC16A-208ENST00000467838 CTDNEP1O95476 244 aa17.04■□□□□ 0.32
SEC16A-208ENST00000467838 TNNT1P13805 278 aa17.04■□□□□ 0.32
SEC16A-208ENST00000467838 SNW1Q13573 536 aaKnown RBP17.04■□□□□ 0.32
SEC16A-208ENST00000467838 ENGASEQ8NFI3 743 aa17.04■□□□□ 0.32
SEC16A-208ENST00000467838 C16orf45Q96MC5 204 aaPredicted RBP17.04■□□□□ 0.32
SEC16A-208ENST00000467838 DSCC1Q9BVC3 393 aa17.04■□□□□ 0.32
SEC16A-208ENST00000467838 TNS3Q68CZ2 1445 aa17.03■□□□□ 0.32
SEC16A-208ENST00000467838 HSP90B1P14625 803 aaKnown RBP17.03■□□□□ 0.32
SEC16A-208ENST00000467838 CASP7P55210 303 aa17.03■□□□□ 0.32
SEC16A-208ENST00000467838 EXOSC10Q01780 885 aaKnown RBP17.03■□□□□ 0.32
SEC16A-208ENST00000467838 COPS6Q7L5N1 327 aa17.03■□□□□ 0.32
SEC16A-208ENST00000467838 DHX32Q7L7V1 743 aaKnown RBP17.03■□□□□ 0.32
SEC16A-208ENST00000467838 LRRC8AQ8IWT6 810 aa17.03■□□□□ 0.32
SEC16A-208ENST00000467838 PRDM10Q9NQV6 1147 aa17.03■□□□□ 0.32
SEC16A-208ENST00000467838 PKD1L3Q7Z443 1732 aa17.03■□□□□ 0.32
SEC16A-208ENST00000467838 DDX60Q8IY21 1712 aaKnown RBP17.03■□□□□ 0.32
SEC16A-208ENST00000467838 PARP4Q9UKK3 1724 aaKnown RBP17.03■□□□□ 0.32
SEC16A-208ENST00000467838 CCDC129Q6ZRS4 1044 aa17.02■□□□□ 0.32
SEC16A-208ENST00000467838 DBNDD2Q9BQY9 259 aa17.02■□□□□ 0.32
SEC16A-208ENST00000467838 GOLPH3LQ9H4A5 285 aa17.02■□□□□ 0.32
SEC16A-208ENST00000467838 HELLSQ9NRZ9 838 aa17.02■□□□□ 0.32
SEC16A-208ENST00000467838 AXIN2Q9Y2T1 843 aa17.02■□□□□ 0.32
SEC16A-208ENST00000467838 TJP1Q07157 1748 aa17.02■□□□□ 0.32
SEC16A-208ENST00000467838 PTPDC1A2A3K4 754 aa17.02■□□□□ 0.31
SEC16A-208ENST00000467838 GOLGA6L19H0YKK7 550 aa17.02■□□□□ 0.31
SEC16A-208ENST00000467838 CBX1P83916 185 aa17.02■□□□□ 0.31
SEC16A-208ENST00000467838 FAM160A1Q05DH4 1040 aa17.02■□□□□ 0.31
SEC16A-208ENST00000467838 ANKRD13DQ6ZTN6 518 aa17.02■□□□□ 0.31
SEC16A-208ENST00000467838 NYAP1Q6ZVC0 841 aa17.02■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 42.8 ms