RNA–Protein interactions for RNA: ENST00000466519.5

SEC22A-202, Transcript of SEC22 homolog A, vesicle trafficking protein, humanhuman

TSL 4

Gene SEC22A, Length 572 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC22A-202ENST00000466519 GDF9O60383 454 aa8.4□□□□□ -1.06
SEC22A-202ENST00000466519 RPS6KA4O75676 772 aa8.4□□□□□ -1.06
SEC22A-202ENST00000466519 RC3H1Q5TC82 1133 aaKnown RBP8.4□□□□□ -1.06
SEC22A-202ENST00000466519 TRIM67Q6ZTA4 783 aa8.4□□□□□ -1.06
SEC22A-202ENST00000466519 TNS4Q8IZW8 715 aa8.4□□□□□ -1.06
SEC22A-202ENST00000466519 SLC4A9Q96Q91 983 aa8.4□□□□□ -1.06
SEC22A-202ENST00000466519 CARD14Q9BXL6 1004 aa8.4□□□□□ -1.06
SEC22A-202ENST00000466519 RRAGCQ9HB90 399 aa8.4□□□□□ -1.06
SEC22A-202ENST00000466519 PIM2Q9P1W9 311 aa8.4□□□□□ -1.06
SEC22A-202ENST00000466519 C4BP0C0L5 1744 aa8.4□□□□□ -1.07
SEC22A-202ENST00000466519 C10orf71Q711Q0 1435 aa8.39□□□□□ -1.07
SEC22A-202ENST00000466519 WNT7AO00755 349 aa8.39□□□□□ -1.07
SEC22A-202ENST00000466519 PER1O15534 1290 aaPredicted RBP8.39□□□□□ -1.07
SEC22A-202ENST00000466519 DALRD3Q5D0E6 543 aaKnown RBP8.39□□□□□ -1.07
SEC22A-202ENST00000466519 PTCRAQ6ISU1 281 aaPredicted RBP8.39□□□□□ -1.07
SEC22A-202ENST00000466519 RNF181Q9P0P0 153 aa8.39□□□□□ -1.07
SEC22A-202ENST00000466519 MAP10Q9P2G4 905 aa8.39□□□□□ -1.07
SEC22A-202ENST00000466519 C5P01031 1676 aa8.38□□□□□ -1.07
SEC22A-202ENST00000466519 ERVV-2B6SEH9 535 aa8.38□□□□□ -1.07
SEC22A-202ENST00000466519 TNFRSF10AO00220 468 aa8.38□□□□□ -1.07
SEC22A-202ENST00000466519 RFC5P40937 340 aa8.38□□□□□ -1.07
SEC22A-202ENST00000466519 PRELPP51888 382 aa8.38□□□□□ -1.07
SEC22A-202ENST00000466519 FOXC1Q12948 553 aa8.38□□□□□ -1.07
SEC22A-202ENST00000466519 CDCA8Q53HL2 280 aa8.38□□□□□ -1.07
SEC22A-202ENST00000466519 DCAF5Q96JK2 942 aa8.38□□□□□ -1.07
SEC22A-202ENST00000466519 PKD2L1Q9P0L9 805 aa8.38□□□□□ -1.07
SEC22A-202ENST00000466519 CICQ96RK0 1608 aaPredicted RBP8.38□□□□□ -1.07
SEC22A-202ENST00000466519 NCAPD2Q15021 1401 aa8.37□□□□□ -1.07
SEC22A-202ENST00000466519 PLEKHG2Q9H7P9 1386 aa8.37□□□□□ -1.07
SEC22A-202ENST00000466519 CNTNAP4Q9C0A0 1308 aa8.37□□□□□ -1.07
SEC22A-202ENST00000466519 SMC1BQ8NDV3 1235 aa8.37□□□□□ -1.07
SEC22A-202ENST00000466519 ARMC2Q8NEN0 867 aa8.37□□□□□ -1.07
SEC22A-202ENST00000466519 POLKQ9UBT6 870 aa8.37□□□□□ -1.07
SEC22A-202ENST00000466519 KAT6BQ8WYB5 2073 aa8.37□□□□□ -1.07
SEC22A-202ENST00000466519 KDRP35968 1356 aa8.36□□□□□ -1.07
SEC22A-202ENST00000466519 PTCD1O75127 700 aaKnown RBP8.36□□□□□ -1.07
SEC22A-202ENST00000466519 AP1G2O75843 785 aa8.36□□□□□ -1.07
SEC22A-202ENST00000466519 HSP90AB1P08238 724 aaKnown RBP8.36□□□□□ -1.07
SEC22A-202ENST00000466519 CHRNA5P30532 468 aa8.36□□□□□ -1.07
SEC22A-202ENST00000466519 CABP4P57796 275 aa8.36□□□□□ -1.07
SEC22A-202ENST00000466519 CTDSPL2Q05D32 466 aa8.36□□□□□ -1.07
SEC22A-202ENST00000466519 EIF4A2Q14240 407 aaKnown RBP8.36□□□□□ -1.07
SEC22A-202ENST00000466519 TMEM259Q4ZIN3 620 aa8.36□□□□□ -1.07
SEC22A-202ENST00000466519 ZNF511Q8NB15 262 aa8.36□□□□□ -1.07
SEC22A-202ENST00000466519 SRP68Q9UHB9 627 aaKnown RBP8.36□□□□□ -1.07
SEC22A-202ENST00000466519 TOGARAM1Q9Y4F4 1720 aa8.36□□□□□ -1.07
SEC22A-202ENST00000466519 KCPQ6ZWJ8 1503 aa8.35□□□□□ -1.07
SEC22A-202ENST00000466519 USP17L8P0C7I0 530 aa8.35□□□□□ -1.07
SEC22A-202ENST00000466519 CRKLP46109 303 aaKnown RBP8.35□□□□□ -1.07
SEC22A-202ENST00000466519 SKOR1P84550 965 aa8.35□□□□□ -1.07
SEC22A-202ENST00000466519 DDR1Q08345 913 aa8.35□□□□□ -1.07
SEC22A-202ENST00000466519 PLEKHO1Q53GL0 409 aaPredicted RBP8.35□□□□□ -1.07
SEC22A-202ENST00000466519 Q6ZNB5 142 aa8.35□□□□□ -1.07
SEC22A-202ENST00000466519 USP42Q9H9J4 1324 aaKnown RBP8.34□□□□□ -1.07
SEC22A-202ENST00000466519 HSPA1AP0DMV8 641 aaKnown RBP8.34□□□□□ -1.07
SEC22A-202ENST00000466519 HSPA1BP0DMV9 641 aaKnown RBP8.34□□□□□ -1.07
SEC22A-202ENST00000466519 VEGFAP15692 232 aaPredicted RBP8.34□□□□□ -1.07
SEC22A-202ENST00000466519 TM4SF1P30408 202 aa8.34□□□□□ -1.07
SEC22A-202ENST00000466519 TNNT2P45379 298 aaPredicted RBP8.34□□□□□ -1.07
SEC22A-202ENST00000466519 LINC01559Q495D7 138 aa8.34□□□□□ -1.07
SEC22A-202ENST00000466519 CYP4X1Q8N118 509 aa8.34□□□□□ -1.07
SEC22A-202ENST00000466519 EHBP1Q8NDI1 1231 aa8.34□□□□□ -1.07
SEC22A-202ENST00000466519 BAP1Q92560 729 aa8.34□□□□□ -1.07
SEC22A-202ENST00000466519 RGPD2P0DJD1 1756 aa8.33□□□□□ -1.08
SEC22A-202ENST00000466519 GLTPD2A6NH11 291 aa8.33□□□□□ -1.08
SEC22A-202ENST00000466519 POLRMTO00411 1230 aaKnown RBP8.33□□□□□ -1.08
SEC22A-202ENST00000466519 LMNB1P20700 586 aa8.33□□□□□ -1.08
SEC22A-202ENST00000466519 MTHFSP49914 203 aa8.33□□□□□ -1.08
SEC22A-202ENST00000466519 SH3BP2P78314 561 aa8.33□□□□□ -1.08
SEC22A-202ENST00000466519 RASSF7Q02833 373 aa8.33□□□□□ -1.08
SEC22A-202ENST00000466519 AMOTQ4VCS5 1084 aa8.33□□□□□ -1.08
SEC22A-202ENST00000466519 ZNF530Q6P9A1 599 aaPredicted RBP8.33□□□□□ -1.08
SEC22A-202ENST00000466519 NFATC2IPQ8NCF5 419 aa8.33□□□□□ -1.08
SEC22A-202ENST00000466519 GPKOWQ92917 476 aaPredicted RBP eCLIP8.33□□□□□ -1.085e-7■■■■□ 23.9
SEC22A-202ENST00000466519 MRGPRX2Q96LB1 330 aa8.33□□□□□ -1.08
SEC22A-202ENST00000466519 ZC3H4Q9UPT8 1303 aaKnown RBP8.32□□□□□ -1.08
SEC22A-202ENST00000466519 PKDCCQ504Y2 493 aa8.32□□□□□ -1.08
SEC22A-202ENST00000466519 USPL1Q5W0Q7 1092 aa8.32□□□□□ -1.08
SEC22A-202ENST00000466519 INTS5Q6P9B9 1019 aaKnown RBP8.32□□□□□ -1.08
SEC22A-202ENST00000466519 PNMA1Q8ND90 353 aa8.32□□□□□ -1.08
SEC22A-202ENST00000466519 LRRN4Q8WUT4 740 aa8.32□□□□□ -1.08
SEC22A-202ENST00000466519 TOR4AQ9NXH8 423 aa8.32□□□□□ -1.08
SEC22A-202ENST00000466519 UBR3Q6ZT12 1888 aa8.32□□□□□ -1.08
SEC22A-202ENST00000466519 TTC24A2A3L6 582 aaPredicted RBP8.31□□□□□ -1.08
SEC22A-202ENST00000466519 FAM187AA6NFU0 413 aa8.31□□□□□ -1.08
SEC22A-202ENST00000466519 DGAT1O75907 488 aa8.31□□□□□ -1.08
SEC22A-202ENST00000466519 VARSP26640 1264 aaKnown RBP8.31□□□□□ -1.08
SEC22A-202ENST00000466519 C1orf141Q5JVX7 400 aa8.31□□□□□ -1.08
SEC22A-202ENST00000466519 SNIP1Q8TAD8 396 aaKnown RBP8.31□□□□□ -1.08
SEC22A-202ENST00000466519 MAP2P11137 1827 aaKnown RBP8.31□□□□□ -1.08
SEC22A-202ENST00000466519 TAF1LQ8IZX4 1826 aa8.31□□□□□ -1.08
SEC22A-202ENST00000466519 KDM6AO15550 1401 aaPredicted RBP8.3□□□□□ -1.08
SEC22A-202ENST00000466519 POTECB2RU33 542 aa8.3□□□□□ -1.08
SEC22A-202ENST00000466519 NFIXQ14938 502 aa8.3□□□□□ -1.08
SEC22A-202ENST00000466519 BPHLQ86WA6 291 aaPredicted RBP8.3□□□□□ -1.08
SEC22A-202ENST00000466519 DNAJC10Q8IXB1 793 aa8.3□□□□□ -1.08
SEC22A-202ENST00000466519 TTLL6Q8N841 843 aa8.3□□□□□ -1.08
SEC22A-202ENST00000466519 BANK1Q8NDB2 785 aa8.3□□□□□ -1.08
SEC22A-202ENST00000466519 C4AP0C0L4 1744 aa8.29□□□□□ -1.08
SEC22A-202ENST00000466519 PKD1L3Q7Z443 1732 aa8.29□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 48.7 ms