RNA–Protein interactions for RNA: ENST00000466391.1

LSG1-206, Transcript of large 60S subunit nuclear export GTPase 1, humanhuman

TSL 2

Gene LSG1, Length 791 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSG1-206ENST00000466391 PRKRIP1Q9H875 184 aaPredicted RBP11.28□□□□□ -0.6
LSG1-206ENST00000466391 TRPM2O94759 1503 aa11.28□□□□□ -0.6
LSG1-206ENST00000466391 ATP7AQ04656 1500 aa11.28□□□□□ -0.6
LSG1-206ENST00000466391 CFAP74Q9C0B2 1584 aa11.28□□□□□ -0.6
LSG1-206ENST00000466391 DHX29Q7Z478 1369 aaKnown RBP11.28□□□□□ -0.6
LSG1-206ENST00000466391 RNF17Q9BXT8 1623 aaKnown RBP11.27□□□□□ -0.6
LSG1-206ENST00000466391 FANCAO15360 1455 aa11.27□□□□□ -0.6
LSG1-206ENST00000466391 PRDM15P57071 1507 aaPredicted RBP11.27□□□□□ -0.61
LSG1-206ENST00000466391 SERPINB4P48594 390 aa11.27□□□□□ -0.61
LSG1-206ENST00000466391 FOXR1Q6PIV2 292 aa11.27□□□□□ -0.61
LSG1-206ENST00000466391 FIGNL1Q6PIW4 674 aa11.27□□□□□ -0.61
LSG1-206ENST00000466391 BCS1LQ9Y276 419 aa11.27□□□□□ -0.61
LSG1-206ENST00000466391 SUPT16HQ9Y5B9 1047 aaKnown RBP11.27□□□□□ -0.61
LSG1-206ENST00000466391 DNMT3AQ9Y6K1 912 aaPredicted RBP11.27□□□□□ -0.61
LSG1-206ENST00000466391 PTPRTO14522 1441 aa11.26□□□□□ -0.61
LSG1-206ENST00000466391 ATXN7O15265 892 aaPredicted RBP11.26□□□□□ -0.61
LSG1-206ENST00000466391 NFX1Q12986 1120 aaKnown RBP11.26□□□□□ -0.61
LSG1-206ENST00000466391 UBAP2LQ14157 1087 aaKnown RBP11.26□□□□□ -0.61
LSG1-206ENST00000466391 TXNDC2Q86VQ3 553 aa11.26□□□□□ -0.61
LSG1-206ENST00000466391 IFT43Q96FT9 208 aa11.26□□□□□ -0.61
LSG1-206ENST00000466391 ANO2Q9NQ90 1003 aa11.26□□□□□ -0.61
LSG1-206ENST00000466391 ERBB4Q15303 1308 aa11.26□□□□□ -0.61
LSG1-206ENST00000466391 TNFRSF10BO14763 440 aa11.25□□□□□ -0.61
LSG1-206ENST00000466391 ZNF211Q13398 564 aaPredicted RBP11.25□□□□□ -0.61
LSG1-206ENST00000466391 MTMR3Q13615 1198 aa11.25□□□□□ -0.61
LSG1-206ENST00000466391 GPR161Q8N6U8 529 aaKnown RBP11.25□□□□□ -0.61
LSG1-206ENST00000466391 HELQQ8TDG4 1101 aa11.25□□□□□ -0.61
LSG1-206ENST00000466391 TRERF1Q96PN7 1200 aa11.25□□□□□ -0.61
LSG1-206ENST00000466391 PCDHGC4Q9Y5F7 938 aa11.25□□□□□ -0.61
LSG1-206ENST00000466391 CEP152O94986 1710 aa11.25□□□□□ -0.61
LSG1-206ENST00000466391 SPHKAPQ2M3C7 1700 aa11.25□□□□□ -0.61
LSG1-206ENST00000466391 SPAG9O60271 1321 aaKnown RBP11.25□□□□□ -0.61
LSG1-206ENST00000466391 KTN1Q86UP2 1357 aaKnown RBP11.25□□□□□ -0.61
LSG1-206ENST00000466391 ASXL2Q76L83 1435 aa11.25□□□□□ -0.61
LSG1-206ENST00000466391 DCDC2BA2VCK2 349 aa11.24□□□□□ -0.61
LSG1-206ENST00000466391 TGFBR3LH3BV60 316 aa11.24□□□□□ -0.61
LSG1-206ENST00000466391 KHNYNO15037 678 aaKnown RBP11.24□□□□□ -0.61
LSG1-206ENST00000466391 BRD2P25440 801 aaKnown RBP11.24□□□□□ -0.61
LSG1-206ENST00000466391 KCNA1Q09470 495 aa11.24□□□□□ -0.61
LSG1-206ENST00000466391 IRF7Q92985 503 aa11.24□□□□□ -0.61
LSG1-206ENST00000466391 ABHD17AQ96GS6 310 aa11.24□□□□□ -0.61
LSG1-206ENST00000466391 CEP63Q96MT8 703 aa11.24□□□□□ -0.61
LSG1-206ENST00000466391 BNIP3LO60238 219 aa11.23□□□□□ -0.61
LSG1-206ENST00000466391 WFS1O76024 890 aa11.23□□□□□ -0.61
LSG1-206ENST00000466391 VSIG8P0DPA2 414 aa11.23□□□□□ -0.61
LSG1-206ENST00000466391 SAMD5Q5TGI4 173 aa11.23□□□□□ -0.61
LSG1-206ENST00000466391 BTLAQ7Z6A9 289 aa11.23□□□□□ -0.61
LSG1-206ENST00000466391 CARD11Q9BXL7 1154 aa11.23□□□□□ -0.61
LSG1-206ENST00000466391 STIM2Q9P246 746 aa11.23□□□□□ -0.61
LSG1-206ENST00000466391 ADGRL1O94910 1474 aa11.23□□□□□ -0.61
LSG1-206ENST00000466391 LMTK2Q8IWU2 1503 aa11.23□□□□□ -0.61
LSG1-206ENST00000466391 MROH1Q8NDA8 1641 aa11.23□□□□□ -0.61
LSG1-206ENST00000466391 FAM26DQ5JW98 314 aa11.22□□□□□ -0.61
LSG1-206ENST00000466391 ETFBKMTQ8IXQ9 262 aa11.22□□□□□ -0.61
LSG1-206ENST00000466391 KIDINS220Q9ULH0 1771 aa11.21□□□□□ -0.61
LSG1-206ENST00000466391 KIAA1210Q9ULL0 1709 aa11.21□□□□□ -0.61
LSG1-206ENST00000466391 MADDQ8WXG6 1647 aa11.21□□□□□ -0.61
LSG1-206ENST00000466391 MICAL2O94851 1124 aa11.21□□□□□ -0.61
LSG1-206ENST00000466391 TNP2Q05952 138 aa11.21□□□□□ -0.61
LSG1-206ENST00000466391 IER5Q5VY09 327 aa11.21□□□□□ -0.61
LSG1-206ENST00000466391 TREML1Q86YW5 311 aa11.21□□□□□ -0.61
LSG1-206ENST00000466391 KCTD17Q8N5Z5 321 aa11.21□□□□□ -0.61
LSG1-206ENST00000466391 DCAF11Q8TEB1 546 aa11.21□□□□□ -0.61
LSG1-206ENST00000466391 NDFIP2Q9NV92 336 aa11.21□□□□□ -0.61
LSG1-206ENST00000466391 DMGDHQ9UI17 866 aaKnown RBP11.21□□□□□ -0.61
LSG1-206ENST00000466391 PHF24Q9UPV7 400 aa11.21□□□□□ -0.61
LSG1-206ENST00000466391 IVNS1ABPQ9Y6Y0 642 aa11.21□□□□□ -0.61
LSG1-206ENST00000466391 ZNF518AQ6AHZ1 1483 aa11.2□□□□□ -0.62
LSG1-206ENST00000466391 COL17A1Q9UMD9 1497 aaPredicted RBP11.2□□□□□ -0.62
LSG1-206ENST00000466391 FAM157BP0CG42 384 aa11.2□□□□□ -0.62
LSG1-206ENST00000466391 MAPTP10636 758 aaKnown RBP11.2□□□□□ -0.62
LSG1-206ENST00000466391 IDH3AP50213 366 aa11.2□□□□□ -0.62
LSG1-206ENST00000466391 TYRO3Q06418 890 aa11.2□□□□□ -0.62
LSG1-206ENST00000466391 CFHR5Q9BXR6 569 aa11.2□□□□□ -0.62
LSG1-206ENST00000466391 BRD7Q9NPI1 651 aa11.2□□□□□ -0.62
LSG1-206ENST00000466391 ATXN7L1Q9ULK2 861 aaPredicted RBP11.2□□□□□ -0.62
LSG1-206ENST00000466391 GNEQ9Y223 722 aaKnown RBP11.2□□□□□ -0.62
LSG1-206ENST00000466391 SCAPERQ9BY12 1400 aa11.19□□□□□ -0.62
LSG1-206ENST00000466391 KANK1Q14678 1352 aa11.19□□□□□ -0.62
LSG1-206ENST00000466391 FKBP4Q02790 459 aaKnown RBP eCLIP11.19□□□□□ -0.62
LSG1-206ENST00000466391 EGFL7Q9UHF1 273 aa11.19□□□□□ -0.62
LSG1-206ENST00000466391 CLTCL1P53675 1640 aa11.19□□□□□ -0.62
LSG1-206ENST00000466391 IQGAP1P46940 1657 aa11.18□□□□□ -0.62
LSG1-206ENST00000466391 PATL2C9JE40 543 aaKnown RBP11.18□□□□□ -0.62
LSG1-206ENST00000466391 H3BRB1 525 aa11.18□□□□□ -0.62
LSG1-206ENST00000466391 ZBTB39O15060 712 aa11.18□□□□□ -0.62
LSG1-206ENST00000466391 MPSTP25325 297 aa11.18□□□□□ -0.62
LSG1-206ENST00000466391 SF3B2Q13435 895 aaKnown RBP11.18□□□□□ -0.62
LSG1-206ENST00000466391 LCE2CQ5TA81 110 aa11.18□□□□□ -0.62
LSG1-206ENST00000466391 TREML4Q6UXN2 200 aa11.18□□□□□ -0.62
LSG1-206ENST00000466391 ABTB2Q8N961 1025 aa11.18□□□□□ -0.62
LSG1-206ENST00000466391 COL25A1Q9BXS0 654 aaPredicted RBP11.18□□□□□ -0.62
LSG1-206ENST00000466391 TUT1Q9H6E5 874 aaKnown RBP11.18□□□□□ -0.62
LSG1-206ENST00000466391 EFCAB6Q5THR3 1501 aa11.18□□□□□ -0.62
LSG1-206ENST00000466391 MLH3Q9UHC1 1453 aa11.18□□□□□ -0.62
LSG1-206ENST00000466391 ZBED9Q6R2W3 1325 aa11.17□□□□□ -0.62
LSG1-206ENST00000466391 EFSO43281 561 aa11.17□□□□□ -0.62
LSG1-206ENST00000466391 ICMTO60725 284 aa11.17□□□□□ -0.62
LSG1-206ENST00000466391 FGFR3P22607 806 aa11.17□□□□□ -0.62
LSG1-206ENST00000466391 GAS6Q14393 721 aa11.17□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 129 ms