RNA–Protein interactions for RNA: ENST00000464764.5

CLCNKA-204, Transcript of chloride voltage-gated channel Ka, humanhuman

TSL 2

Gene CLCNKA, Length 3,060 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCNKA-204ENST00000464764 CFAP45Q9UL16 551 aa14.77□□□□□ -0.05
CLCNKA-204ENST00000464764 CTDNEP1O95476 244 aa14.76□□□□□ -0.05
CLCNKA-204ENST00000464764 APOBRQ0VD83 1088 aa14.76□□□□□ -0.05
CLCNKA-204ENST00000464764 NBPF11Q86T75 865 aa14.76□□□□□ -0.05
CLCNKA-204ENST00000464764 SNRKQ9NRH2 765 aa14.76□□□□□ -0.05
CLCNKA-204ENST00000464764 FMN2Q9NZ56 1722 aa14.76□□□□□ -0.05
CLCNKA-204ENST00000464764 GIGYF1O75420 1035 aaPredicted RBP14.76□□□□□ -0.05
CLCNKA-204ENST00000464764 ALDH1L1O75891 902 aa14.76□□□□□ -0.05
CLCNKA-204ENST00000464764 ME1P48163 572 aa14.76□□□□□ -0.05
CLCNKA-204ENST00000464764 FSIP1Q8NA03 581 aa14.76□□□□□ -0.05
CLCNKA-204ENST00000464764 RBM33Q96EV2 1170 aaKnown RBP14.76□□□□□ -0.05
CLCNKA-204ENST00000464764 CACNA1FO60840 1977 aa14.75□□□□□ -0.05
CLCNKA-204ENST00000464764 OTUD7BQ6GQQ9 843 aa14.75□□□□□ -0.05
CLCNKA-204ENST00000464764 ALDH8A1Q9H2A2 487 aaPredicted RBP14.75□□□□□ -0.05
CLCNKA-204ENST00000464764 A0A1B0GVL5 298 aa14.75□□□□□ -0.05
CLCNKA-204ENST00000464764 DDX46Q7L014 1031 aaKnown RBP14.75□□□□□ -0.05
CLCNKA-204ENST00000464764 RCOR1Q9UKL0 485 aa14.75□□□□□ -0.05
CLCNKA-204ENST00000464764 BIN1O00499 593 aa14.74□□□□□ -0.05
CLCNKA-204ENST00000464764 KINO60870 393 aaKnown RBP14.74□□□□□ -0.05
CLCNKA-204ENST00000464764 IGKV5-2P06315 115 aa14.74□□□□□ -0.05
CLCNKA-204ENST00000464764 PDIA4P13667 645 aaKnown RBP14.74□□□□□ -0.05
CLCNKA-204ENST00000464764 PIP4K2AP48426 406 aaPredicted RBP14.74□□□□□ -0.05
CLCNKA-204ENST00000464764 E4F1Q66K89 784 aaPredicted RBP14.74□□□□□ -0.05
CLCNKA-204ENST00000464764 SYT10Q6XYQ8 523 aa14.74□□□□□ -0.05
CLCNKA-204ENST00000464764 CCDC73Q6ZRK6 1079 aa14.74□□□□□ -0.05
CLCNKA-204ENST00000464764 NSUN7Q8NE18 718 aaKnown RBP14.74□□□□□ -0.05
CLCNKA-204ENST00000464764 DBNLQ9UJU6 430 aaKnown RBP14.74□□□□□ -0.05
CLCNKA-204ENST00000464764 TAOK2Q9UL54 1235 aa14.74□□□□□ -0.05
CLCNKA-204ENST00000464764 TNRQ92752 1358 aa14.74□□□□□ -0.05
CLCNKA-204ENST00000464764 VGLL3A8MV65 326 aa14.74□□□□□ -0.05
CLCNKA-204ENST00000464764 PTPN21Q16825 1174 aa14.74□□□□□ -0.05
CLCNKA-204ENST00000464764 TSGA10IPQ3SY00 556 aa14.74□□□□□ -0.05
CLCNKA-204ENST00000464764 GORABQ5T7V8 394 aa14.74□□□□□ -0.05
CLCNKA-204ENST00000464764 ISM2Q6H9L7 571 aa14.74□□□□□ -0.05
CLCNKA-204ENST00000464764 ENGASEQ8NFI3 743 aa14.74□□□□□ -0.05
CLCNKA-204ENST00000464764 BBXQ8WY36 941 aaPredicted RBP14.74□□□□□ -0.05
CLCNKA-204ENST00000464764 ZSCAN16Q9H4T2 348 aaPredicted RBP14.74□□□□□ -0.05
CLCNKA-204ENST00000464764 HMG20BQ9P0W2 317 aa14.74□□□□□ -0.05
CLCNKA-204ENST00000464764 SLU7O95391 586 aaKnown RBP14.74□□□□□ -0.05
CLCNKA-204ENST00000464764 MYL6BP14649 208 aa14.74□□□□□ -0.05
CLCNKA-204ENST00000464764 ILDR1Q86SU0 546 aaPredicted RBP14.74□□□□□ -0.05
CLCNKA-204ENST00000464764 ERO1AQ96HE7 468 aa14.74□□□□□ -0.05
CLCNKA-204ENST00000464764 TRERF1Q96PN7 1200 aa14.74□□□□□ -0.05
CLCNKA-204ENST00000464764 PTPDC1A2A3K4 754 aa14.73□□□□□ -0.05
CLCNKA-204ENST00000464764 HOXB7P09629 217 aa14.73□□□□□ -0.05
CLCNKA-204ENST00000464764 USPL1Q5W0Q7 1092 aa14.73□□□□□ -0.05
CLCNKA-204ENST00000464764 LINS1Q8NG48 757 aa14.73□□□□□ -0.05
CLCNKA-204ENST00000464764 SDF4Q9BRK5 362 aa14.73□□□□□ -0.05
CLCNKA-204ENST00000464764 TOPAZ1Q8N9V7 1692 aa14.73□□□□□ -0.05
CLCNKA-204ENST00000464764 TFCP2Q12800 502 aa14.73□□□□□ -0.05
CLCNKA-204ENST00000464764 DPCR1Q3MIW9 517 aa14.73□□□□□ -0.05
CLCNKA-204ENST00000464764 SMC2O95347 1197 aa14.72□□□□□ -0.05
CLCNKA-204ENST00000464764 ARMCX5Q6P1M9 558 aa14.72□□□□□ -0.05
CLCNKA-204ENST00000464764 TMC6Q7Z403 805 aa14.72□□□□□ -0.05
CLCNKA-204ENST00000464764 XPO4Q9C0E2 1151 aaKnown RBP14.72□□□□□ -0.05
CLCNKA-204ENST00000464764 ANO10Q9NW15 660 aa14.72□□□□□ -0.05
CLCNKA-204ENST00000464764 ADGRL3Q9HAR2 1447 aa14.72□□□□□ -0.05
CLCNKA-204ENST00000464764 NEMFO60524 1076 aa14.72□□□□□ -0.05
CLCNKA-204ENST00000464764 CAVIN2O95810 425 aa14.72□□□□□ -0.05
CLCNKA-204ENST00000464764 SMARCC2Q8TAQ2 1214 aa14.72□□□□□ -0.05
CLCNKA-204ENST00000464764 GPHNQ9NQX3 736 aaPredicted RBP14.72□□□□□ -0.05
CLCNKA-204ENST00000464764 IFNKQ9P0W0 207 aa14.72□□□□□ -0.05
CLCNKA-204ENST00000464764 PCDHA7Q9UN72 937 aa14.72□□□□□ -0.05
CLCNKA-204ENST00000464764 FAM160A1Q05DH4 1040 aa14.72□□□□□ -0.05
CLCNKA-204ENST00000464764 RIC3Q7Z5B4 369 aa14.72□□□□□ -0.05
CLCNKA-204ENST00000464764 DBNDD2Q9BQY9 259 aa14.72□□□□□ -0.05
CLCNKA-204ENST00000464764 GJB4Q9NTQ9 266 aa14.72□□□□□ -0.05
CLCNKA-204ENST00000464764 PIK3C2AO00443 1686 aa14.71□□□□□ -0.05
CLCNKA-204ENST00000464764 NDUFA8P51970 172 aa14.71□□□□□ -0.05
CLCNKA-204ENST00000464764 SLC39A6Q13433 755 aa14.71□□□□□ -0.05
CLCNKA-204ENST00000464764 CEP57L1Q8IYX8 460 aa14.71□□□□□ -0.05
CLCNKA-204ENST00000464764 PPP1R13BQ96KQ4 1090 aa14.71□□□□□ -0.05
CLCNKA-204ENST00000464764 TMEM51Q9NW97 253 aa14.71□□□□□ -0.05
CLCNKA-204ENST00000464764 FAM53CQ9NYF3 392 aa14.71□□□□□ -0.05
CLCNKA-204ENST00000464764 ZNF609O15014 1411 aa14.71□□□□□ -0.05
CLCNKA-204ENST00000464764 RGPD8O14715 1765 aaPredicted RBP14.71□□□□□ -0.06
CLCNKA-204ENST00000464764 N4BP2Q86UW6 1770 aaPredicted RBP14.71□□□□□ -0.06
CLCNKA-204ENST00000464764 RNMTO43148 476 aaKnown RBP14.71□□□□□ -0.06
CLCNKA-204ENST00000464764 KRT32Q14532 448 aa14.71□□□□□ -0.06
CLCNKA-204ENST00000464764 ZBTB9Q96C00 473 aa14.71□□□□□ -0.06
CLCNKA-204ENST00000464764 CTAGE5O15320 804 aa14.7□□□□□ -0.06
CLCNKA-204ENST00000464764 PFKFB2O60825 505 aa14.7□□□□□ -0.06
CLCNKA-204ENST00000464764 POLR3DP05423 398 aaPredicted RBP14.7□□□□□ -0.06
CLCNKA-204ENST00000464764 GOLGA8FQ08AF8 430 aa14.7□□□□□ -0.06
CLCNKA-204ENST00000464764 GOLGA8DPQ0D2H9 430 aa14.7□□□□□ -0.06
CLCNKA-204ENST00000464764 RAB11FIP4Q86YS3 637 aa14.7□□□□□ -0.06
CLCNKA-204ENST00000464764 TSPOAP1O95153 1857 aa14.7□□□□□ -0.06
CLCNKA-204ENST00000464764 GTF2E1P29083 439 aaPredicted RBP14.7□□□□□ -0.06
CLCNKA-204ENST00000464764 PDIA6Q15084 440 aa14.69□□□□□ -0.06
CLCNKA-204ENST00000464764 AKAP4Q5JQC9 854 aa14.69□□□□□ -0.06
CLCNKA-204ENST00000464764 IP6K1Q92551 441 aa14.69□□□□□ -0.06
CLCNKA-204ENST00000464764 MYD88Q99836 296 aa14.69□□□□□ -0.06
CLCNKA-204ENST00000464764 EPC1Q9H2F5 836 aa14.69□□□□□ -0.06
CLCNKA-204ENST00000464764 CLCN6P51797 869 aa14.69□□□□□ -0.06
CLCNKA-204ENST00000464764 TNNI3KQ59H18 835 aa14.69□□□□□ -0.06
CLCNKA-204ENST00000464764 FMR1NBQ8N0W7 255 aaPredicted RBP14.69□□□□□ -0.06
CLCNKA-204ENST00000464764 CLIC4Q9Y696 253 aa14.69□□□□□ -0.06
CLCNKA-204ENST00000464764 FPGT-TNNI3KV9GXZ4 949 aa14.69□□□□□ -0.06
CLCNKA-204ENST00000464764 MCMDC2Q4G0Z9 681 aa14.69□□□□□ -0.06
CLCNKA-204ENST00000464764 AGLP35573 1532 aa14.68□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms