RNA–Protein interactions for RNA: ENST00000464673.1

LINC01998-201, Transcript of long intergenic non-protein coding RNA 1998, humanhuman

TSL 1 (best) BASIC

Gene LINC01998, Length 1,967 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01998-201ENST00000464673 DDX60Q8IY21 1712 aaKnown RBP11.92□□□□□ -0.5
LINC01998-201ENST00000464673 BAG4O95429 457 aaKnown RBP11.92□□□□□ -0.5
LINC01998-201ENST00000464673 CSF1RP07333 972 aa11.92□□□□□ -0.5
LINC01998-201ENST00000464673 CTSWP56202 376 aa11.92□□□□□ -0.5
LINC01998-201ENST00000464673 KLHL40Q2TBA0 621 aa11.92□□□□□ -0.5
LINC01998-201ENST00000464673 C3orf67Q6ZVT6 689 aa11.92□□□□□ -0.5
LINC01998-201ENST00000464673 NLRP3Q96P20 1036 aa11.92□□□□□ -0.5
LINC01998-201ENST00000464673 CCDC85AQ96PX6 553 aaPredicted RBP11.92□□□□□ -0.5
LINC01998-201ENST00000464673 LRRCC1Q9C099 1032 aa11.92□□□□□ -0.5
LINC01998-201ENST00000464673 NRXN2Q9P2S2 1712 aa11.92□□□□□ -0.5
LINC01998-201ENST00000464673 ANAPC15P60006 121 aa11.92□□□□□ -0.5
LINC01998-201ENST00000464673 CHMP3Q9Y3E7 222 aa11.92□□□□□ -0.5
LINC01998-201ENST00000464673 UTRNP46939 3433 aa11.91□□□□□ -0.5
LINC01998-201ENST00000464673 MYH3P11055 1940 aa11.91□□□□□ -0.5
LINC01998-201ENST00000464673 POLD1P28340 1107 aa11.91□□□□□ -0.5
LINC01998-201ENST00000464673 MCM2P49736 904 aa11.91□□□□□ -0.5
LINC01998-201ENST00000464673 SSH3Q8TE77 659 aa11.91□□□□□ -0.5
LINC01998-201ENST00000464673 BRIP1Q9BX63 1249 aa11.91□□□□□ -0.5
LINC01998-201ENST00000464673 GZF1Q9H116 711 aaPredicted RBP11.91□□□□□ -0.5
LINC01998-201ENST00000464673 GREM2Q9H772 168 aa11.91□□□□□ -0.5
LINC01998-201ENST00000464673 MX1P20591 662 aa11.9□□□□□ -0.5
LINC01998-201ENST00000464673 SF3B3Q15393 1217 aaKnown RBP11.9□□□□□ -0.5
LINC01998-201ENST00000464673 SGIP1Q9BQI5 828 aa11.9□□□□□ -0.5
LINC01998-201ENST00000464673 ESYT1Q9BSJ8 1104 aa11.9□□□□□ -0.5
LINC01998-201ENST00000464673 LAMB2P55268 1798 aa11.9□□□□□ -0.5
LINC01998-201ENST00000464673 PTGER2P43116 358 aa11.9□□□□□ -0.5
LINC01998-201ENST00000464673 POLA2Q14181 598 aa11.9□□□□□ -0.5
LINC01998-201ENST00000464673 CCDC57Q2TAC2 916 aa11.9□□□□□ -0.5
LINC01998-201ENST00000464673 CCDC152Q4G0S7 254 aa11.9□□□□□ -0.5
LINC01998-201ENST00000464673 RIC1Q4ADV7 1423 aa11.89□□□□□ -0.51
LINC01998-201ENST00000464673 KLRG2A4D1S0 409 aaPredicted RBP11.89□□□□□ -0.51
LINC01998-201ENST00000464673 RAB11FIP3O75154 756 aa11.89□□□□□ -0.51
LINC01998-201ENST00000464673 ITGA6P23229 1130 aa11.89□□□□□ -0.51
LINC01998-201ENST00000464673 IFIT5Q13325 482 aaKnown RBP11.89□□□□□ -0.51
LINC01998-201ENST00000464673 CRY2Q49AN0 593 aa11.89□□□□□ -0.51
LINC01998-201ENST00000464673 KLHDC4Q8TBB5 520 aa11.89□□□□□ -0.51
LINC01998-201ENST00000464673 PANK2Q9BZ23 570 aa11.89□□□□□ -0.51
LINC01998-201ENST00000464673 EXOC6BQ9Y2D4 811 aa11.89□□□□□ -0.51
LINC01998-201ENST00000464673 TNRC6CQ9HCJ0 1690 aaKnown RBP11.89□□□□□ -0.51
LINC01998-201ENST00000464673 PDE6BP35913 854 aa11.88□□□□□ -0.51
LINC01998-201ENST00000464673 RFX5P48382 616 aaPredicted RBP11.88□□□□□ -0.51
LINC01998-201ENST00000464673 SPON1Q9HCB6 807 aa11.88□□□□□ -0.51
LINC01998-201ENST00000464673 SEC31BQ9NQW1 1179 aa11.88□□□□□ -0.51
LINC01998-201ENST00000464673 ANKRD31Q8N7Z5 1873 aa11.88□□□□□ -0.51
LINC01998-201ENST00000464673 CUL4AQ13619 759 aa11.88□□□□□ -0.51
LINC01998-201ENST00000464673 RRAGDQ9NQL2 400 aaPredicted RBP11.88□□□□□ -0.51
LINC01998-201ENST00000464673 FOXD4L1Q9NU39 408 aa11.88□□□□□ -0.51
LINC01998-201ENST00000464673 PA2G4Q9UQ80 394 aaKnown RBP11.88□□□□□ -0.51
LINC01998-201ENST00000464673 ANKRD18BA2A2Z9 1011 aa11.87□□□□□ -0.51
LINC01998-201ENST00000464673 APBB1O00213 710 aa11.87□□□□□ -0.51
LINC01998-201ENST00000464673 MCCP23508 829 aa11.87□□□□□ -0.51
LINC01998-201ENST00000464673 CHMLP26374 656 aa11.87□□□□□ -0.51
LINC01998-201ENST00000464673 ZNF445P59923 1031 aa11.87□□□□□ -0.51
LINC01998-201ENST00000464673 PTPN12Q05209 780 aaKnown RBP11.87□□□□□ -0.51
LINC01998-201ENST00000464673 ZNF594Q96JF6 807 aaPredicted RBP11.87□□□□□ -0.51
LINC01998-201ENST00000464673 COPRSQ9NQ92 184 aa11.87□□□□□ -0.51
LINC01998-201ENST00000464673 RTL9Q8NET4 1388 aa11.87□□□□□ -0.51
LINC01998-201ENST00000464673 SURF6O75683 361 aaKnown RBP11.87□□□□□ -0.51
LINC01998-201ENST00000464673 SRGNP10124 158 aa11.87□□□□□ -0.51
LINC01998-201ENST00000464673 DDX46Q7L014 1031 aaKnown RBP11.87□□□□□ -0.51
LINC01998-201ENST00000464673 GAS2L3Q86XJ1 694 aa11.87□□□□□ -0.51
LINC01998-201ENST00000464673 RPGRQ92834 1020 aaKnown RBP11.87□□□□□ -0.51
LINC01998-201ENST00000464673 INTS4Q96HW7 963 aaKnown RBP11.87□□□□□ -0.51
LINC01998-201ENST00000464673 SIL1Q9H173 461 aa11.87□□□□□ -0.51
LINC01998-201ENST00000464673 TAF1P21675 1872 aa11.86□□□□□ -0.51
LINC01998-201ENST00000464673 CLCN1P35523 988 aa11.86□□□□□ -0.51
LINC01998-201ENST00000464673 TAF7LQ5H9L4 462 aa11.86□□□□□ -0.51
LINC01998-201ENST00000464673 LMBRD1Q9NUN5 540 aa11.86□□□□□ -0.51
LINC01998-201ENST00000464673 C10orf71Q711Q0 1435 aa11.86□□□□□ -0.51
LINC01998-201ENST00000464673 H0YIN7 160 aa11.85□□□□□ -0.51
LINC01998-201ENST00000464673 HOXA10P31260 410 aaPredicted RBP11.85□□□□□ -0.51
LINC01998-201ENST00000464673 CELF1Q92879 486 aaKnown RBP11.85□□□□□ -0.51
LINC01998-201ENST00000464673 CDC5LQ99459 802 aaKnown RBP11.85□□□□□ -0.51
LINC01998-201ENST00000464673 PPP1R1BQ9UD71 204 aaPredicted RBP11.85□□□□□ -0.51
LINC01998-201ENST00000464673 CHRNA5P30532 468 aa11.85□□□□□ -0.51
LINC01998-201ENST00000464673 LDHAL6AQ6ZMR3 332 aa11.85□□□□□ -0.51
LINC01998-201ENST00000464673 C2CD5Q86YS7 1000 aa11.85□□□□□ -0.51
LINC01998-201ENST00000464673 ZDHHC9Q9Y397 364 aa11.85□□□□□ -0.51
LINC01998-201ENST00000464673 DDX49Q9Y6V7 483 aaKnown RBP11.85□□□□□ -0.51
LINC01998-201ENST00000464673 NPR1P16066 1061 aa11.84□□□□□ -0.51
LINC01998-201ENST00000464673 RPS8P62241 208 aaKnown RBP11.84□□□□□ -0.51
LINC01998-201ENST00000464673 LRRC24Q50LG9 513 aa11.84□□□□□ -0.51
LINC01998-201ENST00000464673 RBM17Q96I25 401 aaKnown RBP11.84□□□□□ -0.51
LINC01998-201ENST00000464673 PPP1R9BQ96SB3 815 aa11.84□□□□□ -0.51
LINC01998-201ENST00000464673 MPHOSPH8Q99549 860 aa11.84□□□□□ -0.51
LINC01998-201ENST00000464673 PUS3Q9BZE2 481 aaKnown RBP11.84□□□□□ -0.51
LINC01998-201ENST00000464673 COL4A1P02462 1669 aa11.84□□□□□ -0.51
LINC01998-201ENST00000464673 EYA2O00167 538 aa11.83□□□□□ -0.52
LINC01998-201ENST00000464673 IGHMBP2P38935 993 aaKnown RBP11.83□□□□□ -0.52
LINC01998-201ENST00000464673 G3BP1Q13283 466 aaKnown RBP eCLIP11.83□□□□□ -0.52
LINC01998-201ENST00000464673 OS9Q13438 667 aaPredicted RBP11.83□□□□□ -0.52
LINC01998-201ENST00000464673 HSP90AB4PQ58FF6 505 aa11.83□□□□□ -0.52
LINC01998-201ENST00000464673 ANKRD18AQ8IVF6 992 aa11.83□□□□□ -0.52
LINC01998-201ENST00000464673 KLHL34Q8N239 644 aa11.83□□□□□ -0.52
LINC01998-201ENST00000464673 ZGPATQ8N5A5 531 aaKnown RBP11.83□□□□□ -0.52
LINC01998-201ENST00000464673 KIF1BPQ96EK5 621 aa11.83□□□□□ -0.52
LINC01998-201ENST00000464673 MASTLQ96GX5 879 aa11.83□□□□□ -0.52
LINC01998-201ENST00000464673 TMX3Q96JJ7 454 aa11.83□□□□□ -0.52
LINC01998-201ENST00000464673 CRAMP1Q96RY5 1269 aa11.83□□□□□ -0.52
LINC01998-201ENST00000464673 CNNM1Q9NRU3 951 aa11.83□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms