RNA–Protein interactions for RNA: ENST00000463622.6

SCFD1-204, Transcript of sec1 family domain containing 1, humanhuman

TSL 2

Gene SCFD1, Length 1,943 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-204ENST00000463622 NEUROD1Q13562 356 aa5.91□□□□□ -1.46
SCFD1-204ENST00000463622 HIF1AQ16665 826 aa5.91□□□□□ -1.46
SCFD1-204ENST00000463622 TNFRSF25Q93038 417 aa5.91□□□□□ -1.46
SCFD1-204ENST00000463622 MKNK1Q9BUB5 465 aa5.91□□□□□ -1.46
SCFD1-204ENST00000463622 UBE2OQ9C0C9 1292 aaKnown RBP5.91□□□□□ -1.46
SCFD1-204ENST00000463622 ACIN1Q9UKV3 1341 aaKnown RBP5.9□□□□□ -1.46
SCFD1-204ENST00000463622 PROCP04070 461 aa5.9□□□□□ -1.46
SCFD1-204ENST00000463622 NFKB1P19838 968 aa5.9□□□□□ -1.46
SCFD1-204ENST00000463622 INPP5BP32019 993 aa5.9□□□□□ -1.46
SCFD1-204ENST00000463622 SUZ12Q15022 739 aaKnown RBP5.9□□□□□ -1.46
SCFD1-204ENST00000463622 SAP130Q9H0E3 1048 aa5.9□□□□□ -1.46
SCFD1-204ENST00000463622 ZMYM4Q5VZL5 1548 aa5.9□□□□□ -1.47
SCFD1-204ENST00000463622 ATP10AO60312 1499 aa5.9□□□□□ -1.47
SCFD1-204ENST00000463622 NUP153P49790 1475 aaKnown RBP5.9□□□□□ -1.47
SCFD1-204ENST00000463622 FAM229AH3BQW9 127 aa5.89□□□□□ -1.47
SCFD1-204ENST00000463622 MICAL2O94851 1124 aa5.89□□□□□ -1.47
SCFD1-204ENST00000463622 IGHA1P01876 353 aa5.89□□□□□ -1.47
SCFD1-204ENST00000463622 C11orf91Q3C1V1 193 aa5.89□□□□□ -1.47
SCFD1-204ENST00000463622 COX20Q5RI15 118 aa5.89□□□□□ -1.47
SCFD1-204ENST00000463622 TMEM164Q5U3C3 297 aa5.89□□□□□ -1.47
SCFD1-204ENST00000463622 IER5Q5VY09 327 aa5.89□□□□□ -1.47
SCFD1-204ENST00000463622 MICALL1Q8N3F8 863 aa5.89□□□□□ -1.47
SCFD1-204ENST00000463622 NUDT8Q8WV74 236 aa5.89□□□□□ -1.47
SCFD1-204ENST00000463622 CCDC97Q96F63 343 aaPredicted RBP5.89□□□□□ -1.47
SCFD1-204ENST00000463622 IFT43Q96FT9 208 aa5.89□□□□□ -1.47
SCFD1-204ENST00000463622 PNMA5Q96PV4 448 aa5.89□□□□□ -1.47
SCFD1-204ENST00000463622 ARHGEF12Q9NZN5 1544 aa5.89□□□□□ -1.47
SCFD1-204ENST00000463622 SCAPERQ9BY12 1400 aa5.89□□□□□ -1.47
SCFD1-204ENST00000463622 RIMS1Q86UR5 1692 aaKnown RBP5.89□□□□□ -1.47
SCFD1-204ENST00000463622 C1QTNF9BB2RNN3 333 aa5.89□□□□□ -1.47
SCFD1-204ENST00000463622 TARSP26639 723 aaKnown RBP5.89□□□□□ -1.47
SCFD1-204ENST00000463622 CHRNA4P43681 627 aa5.89□□□□□ -1.47
SCFD1-204ENST00000463622 CCINQ13939 588 aa5.89□□□□□ -1.47
SCFD1-204ENST00000463622 COL9A3Q14050 684 aaPredicted RBP5.89□□□□□ -1.47
SCFD1-204ENST00000463622 NAA30Q147X3 362 aaPredicted RBP5.89□□□□□ -1.47
SCFD1-204ENST00000463622 OCLNQ16625 522 aa5.89□□□□□ -1.47
SCFD1-204ENST00000463622 GTF3C5Q9Y5Q8 519 aaPredicted RBP5.89□□□□□ -1.47
SCFD1-204ENST00000463622 IQSEC2Q5JU85 1478 aa5.89□□□□□ -1.47
SCFD1-204ENST00000463622 PLCH2O75038 1416 aa5.88□□□□□ -1.47
SCFD1-204ENST00000463622 OPLAHO14841 1288 aa5.88□□□□□ -1.47
SCFD1-204ENST00000463622 ELOAQ14241 798 aaKnown RBP5.88□□□□□ -1.47
SCFD1-204ENST00000463622 EFCAB2Q5VUJ9 269 aa5.88□□□□□ -1.47
SCFD1-204ENST00000463622 CD163Q86VB7 1156 aa5.88□□□□□ -1.47
SCFD1-204ENST00000463622 DNAJB12Q9NXW2 375 aaKnown RBP5.88□□□□□ -1.47
SCFD1-204ENST00000463622 ZFATQ9P243 1243 aa5.88□□□□□ -1.47
SCFD1-204ENST00000463622 ZFYVE16Q7Z3T8 1539 aa5.88□□□□□ -1.47
SCFD1-204ENST00000463622 UHRF1BP1Q6BDS2 1440 aa5.88□□□□□ -1.47
SCFD1-204ENST00000463622 LTBP4Q8N2S1 1624 aa5.88□□□□□ -1.47
SCFD1-204ENST00000463622 TTC37Q6PGP7 1564 aa5.88□□□□□ -1.47
SCFD1-204ENST00000463622 PIK3R2O00459 728 aa5.87□□□□□ -1.47
SCFD1-204ENST00000463622 SASH3O75995 380 aa5.87□□□□□ -1.47
SCFD1-204ENST00000463622 ATG7O95352 703 aa5.87□□□□□ -1.47
SCFD1-204ENST00000463622 SWI5Q1ZZU3 235 aa5.87□□□□□ -1.47
SCFD1-204ENST00000463622 FAM26DQ5JW98 314 aa5.87□□□□□ -1.47
SCFD1-204ENST00000463622 TREML1Q86YW5 311 aa5.87□□□□□ -1.47
SCFD1-204ENST00000463622 MYO19Q96H55 970 aa5.87□□□□□ -1.47
SCFD1-204ENST00000463622 NOP53Q9NZM5 478 aaKnown RBP5.87□□□□□ -1.47
SCFD1-204ENST00000463622 SLAIN2Q9P270 581 aa5.87□□□□□ -1.47
SCFD1-204ENST00000463622 SLC6A14Q9UN76 642 aa5.87□□□□□ -1.47
SCFD1-204ENST00000463622 SPATA31D1Q6ZQQ2 1576 aa5.87□□□□□ -1.47
SCFD1-204ENST00000463622 EFCAB5A4FU69 1503 aa5.87□□□□□ -1.47
SCFD1-204ENST00000463622 ARSDP51689 593 aa5.87□□□□□ -1.47
SCFD1-204ENST00000463622 MLLT1Q03111 559 aaPredicted RBP5.87□□□□□ -1.47
SCFD1-204ENST00000463622 C20orf204Q6ZNR8 217 aa5.87□□□□□ -1.47
SCFD1-204ENST00000463622 RGL4Q8IZJ4 473 aa5.87□□□□□ -1.47
SCFD1-204ENST00000463622 CMTR1Q8N1G2 835 aaKnown RBP5.87□□□□□ -1.47
SCFD1-204ENST00000463622 AFAP1Q8N556 730 aa5.87□□□□□ -1.47
SCFD1-204ENST00000463622 NAGPAQ9UK23 515 aa5.87□□□□□ -1.47
SCFD1-204ENST00000463622 RTCBQ9Y3I0 505 aaKnown RBP5.87□□□□□ -1.47
SCFD1-204ENST00000463622 C9orf84Q5VXU9 1444 aa5.87□□□□□ -1.47
SCFD1-204ENST00000463622 PBXIP1Q96AQ6 731 aa5.86□□□□□ -1.47
SCFD1-204ENST00000463622 UTP3Q9NQZ2 479 aaKnown RBP eCLIP5.86□□□□□ -1.473e-6■■■■■ 28.8
SCFD1-204ENST00000463622 SERPINA10Q9UK55 444 aa5.86□□□□□ -1.47
SCFD1-204ENST00000463622 TRAPPC8Q9Y2L5 1435 aa5.86□□□□□ -1.47
SCFD1-204ENST00000463622 RICTORQ6R327 1708 aa5.86□□□□□ -1.47
SCFD1-204ENST00000463622 SIGLEC1Q9BZZ2 1709 aa5.86□□□□□ -1.47
SCFD1-204ENST00000463622 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP5.86□□□□□ -1.47
SCFD1-204ENST00000463622 STRCQ7RTU9 1775 aa5.86□□□□□ -1.47
SCFD1-204ENST00000463622 LOC105371045A0A1W2PR82 267 aa5.86□□□□□ -1.47
SCFD1-204ENST00000463622 ZBTB42B2RXF5 422 aa5.86□□□□□ -1.47
SCFD1-204ENST00000463622 UBAP1LF5GYI3 381 aa5.86□□□□□ -1.47
SCFD1-204ENST00000463622 EPB42P16452 691 aa5.86□□□□□ -1.47
SCFD1-204ENST00000463622 SCNN1AP37088 669 aa5.86□□□□□ -1.47
SCFD1-204ENST00000463622 PSAPL1Q6NUJ1 521 aa5.86□□□□□ -1.47
SCFD1-204ENST00000463622 ETFBKMTQ8IXQ9 262 aa5.86□□□□□ -1.47
SCFD1-204ENST00000463622 C1orf115Q9H7X2 142 aa5.86□□□□□ -1.47
SCFD1-204ENST00000463622 JPH1Q9HDC5 661 aaPredicted RBP5.86□□□□□ -1.47
SCFD1-204ENST00000463622 CXXC1Q9P0U4 656 aaPredicted RBP5.86□□□□□ -1.47
SCFD1-204ENST00000463622 HECW1Q76N89 1606 aa5.85□□□□□ -1.47
SCFD1-204ENST00000463622 NCOA1Q15788 1441 aa5.85□□□□□ -1.47
SCFD1-204ENST00000463622 FURINP09958 794 aa5.85□□□□□ -1.47
SCFD1-204ENST00000463622 NID1P14543 1247 aa5.85□□□□□ -1.47
SCFD1-204ENST00000463622 CPB1P15086 417 aa5.85□□□□□ -1.47
SCFD1-204ENST00000463622 BAG6P46379 1132 aa5.85□□□□□ -1.47
SCFD1-204ENST00000463622 GRIK4Q16099 956 aa5.85□□□□□ -1.47
SCFD1-204ENST00000463622 TRAPPC3LQ5T215 181 aa5.85□□□□□ -1.47
SCFD1-204ENST00000463622 HFE2Q6ZVN8 426 aa5.85□□□□□ -1.47
SCFD1-204ENST00000463622 ALYREFQ86V81 257 aaKnown RBP5.85□□□□□ -1.47
SCFD1-204ENST00000463622 CCDC82Q8N4S0 544 aa5.85□□□□□ -1.47
SCFD1-204ENST00000463622 SETD1BQ9UPS6 1966 aaKnown RBP5.85□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 14.6 ms