RNA–Protein interactions for RNA: ENST00000463147.1

USH2A-203, Transcript of usherin, humanhuman

TSL 2

Gene USH2A, Length 618 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USH2A-203ENST00000463147 GLB1P16278 677 aa8.21□□□□□ -1.1
USH2A-203ENST00000463147 USP17L24Q0WX57 530 aa8.21□□□□□ -1.1
USH2A-203ENST00000463147 UVSSAQ2YD98 709 aa8.21□□□□□ -1.1
USH2A-203ENST00000463147 GLMNQ92990 594 aa8.21□□□□□ -1.1
USH2A-203ENST00000463147 VRTNQ9H8Y1 702 aa8.21□□□□□ -1.1
USH2A-203ENST00000463147 KRTAP4-8A0A0G2JLE6 195 aa8.2□□□□□ -1.1
USH2A-203ENST00000463147 WEE1P30291 646 aa8.2□□□□□ -1.1
USH2A-203ENST00000463147 SETDB1Q15047 1291 aa8.2□□□□□ -1.1
USH2A-203ENST00000463147 CRTC2Q53ET0 693 aaPredicted RBP8.2□□□□□ -1.1
USH2A-203ENST00000463147 CMTR1Q8N1G2 835 aaKnown RBP8.2□□□□□ -1.1
USH2A-203ENST00000463147 PPME1Q9Y570 386 aa8.2□□□□□ -1.1
USH2A-203ENST00000463147 OPLAHO14841 1288 aa8.19□□□□□ -1.1
USH2A-203ENST00000463147 KANK4Q5T7N3 995 aaPredicted RBP8.19□□□□□ -1.1
USH2A-203ENST00000463147 ZC3HAV1Q7Z2W4 902 aaKnown RBP8.19□□□□□ -1.1
USH2A-203ENST00000463147 J3QW42 95 aa8.18□□□□□ -1.1
USH2A-203ENST00000463147 MMP20O60882 483 aa8.18□□□□□ -1.1
USH2A-203ENST00000463147 C14orf37Q86TY3 774 aa8.18□□□□□ -1.1
USH2A-203ENST00000463147 PPP1R12CQ9BZL4 782 aa8.18□□□□□ -1.1
USH2A-203ENST00000463147 FAM13BQ9NYF5 915 aa8.18□□□□□ -1.1
USH2A-203ENST00000463147 GP2P55259 537 aaKnown RBP8.17□□□□□ -1.1
USH2A-203ENST00000463147 NLRP13Q86W25 1043 aa8.17□□□□□ -1.1
USH2A-203ENST00000463147 TREML1Q86YW5 311 aa8.17□□□□□ -1.1
USH2A-203ENST00000463147 RGL4Q8IZJ4 473 aa8.17□□□□□ -1.1
USH2A-203ENST00000463147 NSUN5Q96P11 429 aaKnown RBP8.17□□□□□ -1.1
USH2A-203ENST00000463147 ERICH6Q7L0X2 663 aa8.16□□□□□ -1.1
USH2A-203ENST00000463147 SPACA7Q96KW9 195 aa8.16□□□□□ -1.1
USH2A-203ENST00000463147 TAL1P17542 331 aaPredicted RBP8.15□□□□□ -1.1
USH2A-203ENST00000463147 NFIAQ12857 509 aa8.15□□□□□ -1.1
USH2A-203ENST00000463147 FAM117BQ6P1L5 589 aa8.15□□□□□ -1.1
USH2A-203ENST00000463147 PROSER2Q86WR7 435 aaPredicted RBP8.15□□□□□ -1.1
USH2A-203ENST00000463147 CALR3Q96L12 384 aaKnown RBP8.15□□□□□ -1.1
USH2A-203ENST00000463147 KCNMB2Q9Y691 235 aa8.15□□□□□ -1.1
USH2A-203ENST00000463147 FAM177BA6PVY3 158 aa8.14□□□□□ -1.11
USH2A-203ENST00000463147 SMNDC1O75940 238 aaKnown RBP eCLIP8.14□□□□□ -1.11
USH2A-203ENST00000463147 TGFB1P01137 390 aa8.14□□□□□ -1.11
USH2A-203ENST00000463147 CD68P34810 354 aaPredicted RBP8.14□□□□□ -1.11
USH2A-203ENST00000463147 AGGF1Q8N302 714 aaeCLIP8.14□□□□□ -1.11
USH2A-203ENST00000463147 KLHL23Q8NBE8 558 aa8.14□□□□□ -1.11
USH2A-203ENST00000463147 FAM200AQ8TCP9 573 aa8.14□□□□□ -1.11
USH2A-203ENST00000463147 ARXQ96QS3 562 aa8.14□□□□□ -1.11
USH2A-203ENST00000463147 DBNDD2Q9BQY9 259 aa8.14□□□□□ -1.11
USH2A-203ENST00000463147 OAS3Q9Y6K5 1087 aaKnown RBP8.14□□□□□ -1.11
USH2A-203ENST00000463147 LGR5O75473 907 aa8.13□□□□□ -1.11
USH2A-203ENST00000463147 BRD2P25440 801 aaKnown RBP8.13□□□□□ -1.11
USH2A-203ENST00000463147 ZDHHC13Q8IUH4 622 aa8.13□□□□□ -1.11
USH2A-203ENST00000463147 UTP4Q969X6 686 aaKnown RBP8.13□□□□□ -1.11
USH2A-203ENST00000463147 UBL7Q96S82 380 aaPredicted RBP8.13□□□□□ -1.11
USH2A-203ENST00000463147 LRFN2Q9ULH4 789 aa8.13□□□□□ -1.11
USH2A-203ENST00000463147 TRIM33Q9UPN9 1127 aa8.13□□□□□ -1.11
USH2A-203ENST00000463147 FNDC3AQ9Y2H6 1198 aaKnown RBP8.13□□□□□ -1.11
USH2A-203ENST00000463147 RNF114Q9Y508 228 aa8.13□□□□□ -1.11
USH2A-203ENST00000463147 HYAL2Q12891 473 aa8.12□□□□□ -1.11
USH2A-203ENST00000463147 RNF43Q68DV7 783 aa8.12□□□□□ -1.11
USH2A-203ENST00000463147 ACAD11Q709F0 780 aa8.12□□□□□ -1.11
USH2A-203ENST00000463147 FNBP4Q8N3X1 1017 aaPredicted RBP8.12□□□□□ -1.11
USH2A-203ENST00000463147 OR13H1Q8NG92 308 aa8.12□□□□□ -1.11
USH2A-203ENST00000463147 USP20Q9Y2K6 914 aa8.12□□□□□ -1.11
USH2A-203ENST00000463147 SPINK2P20155 84 aa8.11□□□□□ -1.11
USH2A-203ENST00000463147 LMOD1P29536 600 aaPredicted RBP8.11□□□□□ -1.11
USH2A-203ENST00000463147 CDC27P30260 824 aa8.11□□□□□ -1.11
USH2A-203ENST00000463147 ARMC10Q8N2F6 343 aa8.11□□□□□ -1.11
USH2A-203ENST00000463147 PIK3R5Q8WYR1 880 aa8.11□□□□□ -1.11
USH2A-203ENST00000463147 LINC01387J3KSC0 135 aa8.1□□□□□ -1.11
USH2A-203ENST00000463147 MED26O95402 600 aa8.1□□□□□ -1.11
USH2A-203ENST00000463147 WNT11O96014 354 aa8.1□□□□□ -1.11
USH2A-203ENST00000463147 DTX1Q86Y01 620 aa8.1□□□□□ -1.11
USH2A-203ENST00000463147 CLEC10AQ8IUN9 316 aa8.1□□□□□ -1.11
USH2A-203ENST00000463147 FAM46AQ96IP4 442 aaKnown RBP8.1□□□□□ -1.11
USH2A-203ENST00000463147 MYRFLQ96LU7 910 aa8.1□□□□□ -1.11
USH2A-203ENST00000463147 DUOXA2Q1HG44 320 aa8.09□□□□□ -1.11
USH2A-203ENST00000463147 SWI5Q1ZZU3 235 aa8.09□□□□□ -1.11
USH2A-203ENST00000463147 COX20Q5RI15 118 aa8.09□□□□□ -1.11
USH2A-203ENST00000463147 TTC39BQ5VTQ0 682 aaPredicted RBP8.09□□□□□ -1.11
USH2A-203ENST00000463147 GALNT11Q8NCW6 608 aa8.09□□□□□ -1.11
USH2A-203ENST00000463147 C7orf69Q9H7B7 122 aa8.09□□□□□ -1.11
USH2A-203ENST00000463147 UBAP1LF5GYI3 381 aa8.08□□□□□ -1.12
USH2A-203ENST00000463147 SART1O43290 800 aaKnown RBP8.08□□□□□ -1.12
USH2A-203ENST00000463147 CEP135Q66GS9 1140 aa8.08□□□□□ -1.12
USH2A-203ENST00000463147 GIMAP7Q8NHV1 300 aa8.08□□□□□ -1.12
USH2A-203ENST00000463147 WNT8BQ93098 351 aa8.08□□□□□ -1.12
USH2A-203ENST00000463147 COL26A1Q96A83 441 aa8.08□□□□□ -1.12
USH2A-203ENST00000463147 HIF3AQ9Y2N7 669 aa8.08□□□□□ -1.12
USH2A-203ENST00000463147 FSCN2O14926 492 aa8.07□□□□□ -1.12
USH2A-203ENST00000463147 ANKRD34AQ69YU3 496 aa8.07□□□□□ -1.12
USH2A-203ENST00000463147 C16orf46Q6P387 395 aa8.07□□□□□ -1.12
USH2A-203ENST00000463147 TRIM42Q8IWZ5 723 aa8.07□□□□□ -1.12
USH2A-203ENST00000463147 FAM83CQ9BQN1 747 aa8.07□□□□□ -1.12
USH2A-203ENST00000463147 PTPRAP18433 802 aa8.06□□□□□ -1.12
USH2A-203ENST00000463147 SCNN1AP37088 669 aa8.06□□□□□ -1.12
USH2A-203ENST00000463147 LACRTQ9GZZ8 138 aa8.06□□□□□ -1.12
USH2A-203ENST00000463147 KIF4AO95239 1232 aa8.05□□□□□ -1.12
USH2A-203ENST00000463147 WISP1O95388 367 aa8.05□□□□□ -1.12
USH2A-203ENST00000463147 RFX1P22670 979 aa8.05□□□□□ -1.12
USH2A-203ENST00000463147 CABP4P57796 275 aa8.05□□□□□ -1.12
USH2A-203ENST00000463147 FKBP5Q13451 457 aaPredicted RBP8.05□□□□□ -1.12
USH2A-203ENST00000463147 KIAA1211Q6ZU35 1233 aa8.05□□□□□ -1.12
USH2A-203ENST00000463147 FAM20CQ8IXL6 584 aa8.05□□□□□ -1.12
USH2A-203ENST00000463147 ETFBKMTQ8IXQ9 262 aa8.05□□□□□ -1.12
USH2A-203ENST00000463147 CLUAP1Q96AJ1 413 aa8.05□□□□□ -1.12
USH2A-203ENST00000463147 SEC31BQ9NQW1 1179 aa8.05□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms