RNA–Protein interactions for RNA: ENST00000461558.2

CFHR3-204, Transcript of complement factor H related 3, humanhuman

TSL 2

Gene CFHR3, Length 785 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CFHR3-204ENST00000461558 GHRHP01286 108 aa9.29□□□□□ -0.92
CFHR3-204ENST00000461558 RFX1P22670 979 aa9.29□□□□□ -0.92
CFHR3-204ENST00000461558 CDCA8Q53HL2 280 aa9.29□□□□□ -0.92
CFHR3-204ENST00000461558 MRPL18Q9H0U6 180 aaKnown RBP9.29□□□□□ -0.92
CFHR3-204ENST00000461558 SRA1Q9HD15 236 aaKnown RBP9.29□□□□□ -0.92
CFHR3-204ENST00000461558 NOVA2Q9UNW9 492 aaKnown RBP9.29□□□□□ -0.92
CFHR3-204ENST00000461558 CD97P48960 835 aa9.28□□□□□ -0.92
CFHR3-204ENST00000461558 IRAK1P51617 712 aa9.28□□□□□ -0.92
CFHR3-204ENST00000461558 TMEM130Q8N3G9 435 aa9.28□□□□□ -0.92
CFHR3-204ENST00000461558 IL22RA1Q8N6P7 574 aa9.28□□□□□ -0.92
CFHR3-204ENST00000461558 PRIMPOLQ96LW4 560 aa9.28□□□□□ -0.92
CFHR3-204ENST00000461558 RBSNQ9H1K0 784 aa9.28□□□□□ -0.92
CFHR3-204ENST00000461558 F8W735 103 aaPredicted RBP9.27□□□□□ -0.93
CFHR3-204ENST00000461558 ALX3O95076 343 aa9.27□□□□□ -0.93
CFHR3-204ENST00000461558 SWI5Q1ZZU3 235 aa9.27□□□□□ -0.93
CFHR3-204ENST00000461558 ETFBKMTQ8IXQ9 262 aa9.27□□□□□ -0.93
CFHR3-204ENST00000461558 PTCD1O75127 700 aaKnown RBP9.26□□□□□ -0.93
CFHR3-204ENST00000461558 COBLO75128 1261 aa9.26□□□□□ -0.93
CFHR3-204ENST00000461558 SETDB1Q15047 1291 aa9.26□□□□□ -0.93
CFHR3-204ENST00000461558 TRIP4Q15650 581 aaPredicted RBP9.26□□□□□ -0.93
CFHR3-204ENST00000461558 MAP4K3Q8IVH8 894 aa9.26□□□□□ -0.93
CFHR3-204ENST00000461558 DCAF11Q8TEB1 546 aa9.26□□□□□ -0.93
CFHR3-204ENST00000461558 FMNL2Q96PY5 1086 aa9.26□□□□□ -0.93
CFHR3-204ENST00000461558 TRIM33Q9UPN9 1127 aa9.26□□□□□ -0.93
CFHR3-204ENST00000461558 ACIN1Q9UKV3 1341 aaKnown RBP9.26□□□□□ -0.93
CFHR3-204ENST00000461558 PRMT3O60678 531 aa9.25□□□□□ -0.93
CFHR3-204ENST00000461558 YBX3P16989 372 aaKnown RBP eCLIP9.25□□□□□ -0.93
CFHR3-204ENST00000461558 OCLNQ16625 522 aa9.25□□□□□ -0.93
CFHR3-204ENST00000461558 NLRP13Q86W25 1043 aa9.25□□□□□ -0.93
CFHR3-204ENST00000461558 SAP130Q9H0E3 1048 aa9.25□□□□□ -0.93
CFHR3-204ENST00000461558 GSC2O15499 205 aa9.24□□□□□ -0.93
CFHR3-204ENST00000461558 BRD2P25440 801 aaKnown RBP9.24□□□□□ -0.93
CFHR3-204ENST00000461558 C16orf46Q6P387 395 aa9.24□□□□□ -0.93
CFHR3-204ENST00000461558 Q6ZS46 218 aa9.24□□□□□ -0.93
CFHR3-204ENST00000461558 CACTIN-AS1Q8N1I8 211 aa9.23□□□□□ -0.93
CFHR3-204ENST00000461558 MUC3BQ9H195 1237 aa9.23□□□□□ -0.93
CFHR3-204ENST00000461558 ZNF777Q9ULD5 760 aaPredicted RBP9.23□□□□□ -0.93
CFHR3-204ENST00000461558 ZMIZ1Q9ULJ6 1067 aa9.23□□□□□ -0.93
CFHR3-204ENST00000461558 FAM26DQ5JW98 314 aa9.22□□□□□ -0.93
CFHR3-204ENST00000461558 COL26A1Q96A83 441 aa9.22□□□□□ -0.93
CFHR3-204ENST00000461558 KRTAP4-7Q9BYR0 210 aa9.22□□□□□ -0.93
CFHR3-204ENST00000461558 UBAP1LF5GYI3 381 aa9.21□□□□□ -0.94
CFHR3-204ENST00000461558 FAM69CQ0P6D2 419 aa9.21□□□□□ -0.94
CFHR3-204ENST00000461558 ELOAQ14241 798 aaKnown RBP9.21□□□□□ -0.94
CFHR3-204ENST00000461558 AGGF1Q8N302 714 aaeCLIP9.21□□□□□ -0.94
CFHR3-204ENST00000461558 OR13H1Q8NG92 308 aa9.21□□□□□ -0.94
CFHR3-204ENST00000461558 RAXQ9Y2V3 346 aa9.21□□□□□ -0.94
CFHR3-204ENST00000461558 PPME1Q9Y570 386 aa9.21□□□□□ -0.94
CFHR3-204ENST00000461558 KIAA1324LA8MWY0 1029 aaPredicted RBP9.2□□□□□ -0.94
CFHR3-204ENST00000461558 TNFRSF10BO14763 440 aa9.2□□□□□ -0.94
CFHR3-204ENST00000461558 IGLV1-40P01703 118 aa9.2□□□□□ -0.94
CFHR3-204ENST00000461558 GLB1P16278 677 aa9.2□□□□□ -0.94
CFHR3-204ENST00000461558 TAL1P17542 331 aaPredicted RBP9.2□□□□□ -0.94
CFHR3-204ENST00000461558 GP2P55259 537 aaKnown RBP9.2□□□□□ -0.94
CFHR3-204ENST00000461558 ZC3HAV1Q7Z2W4 902 aaKnown RBP9.2□□□□□ -0.94
CFHR3-204ENST00000461558 STK32AQ8WU08 396 aa9.2□□□□□ -0.94
CFHR3-204ENST00000461558 PIK3R5Q8WYR1 880 aa9.2□□□□□ -0.94
CFHR3-204ENST00000461558 FAM13BQ9NYF5 915 aa9.2□□□□□ -0.94
CFHR3-204ENST00000461558 COL13A1Q5TAT6 717 aaPredicted RBP9.19□□□□□ -0.94
CFHR3-204ENST00000461558 OAS3Q9Y6K5 1087 aaKnown RBP9.19□□□□□ -0.94
CFHR3-204ENST00000461558 TGFB1P01137 390 aa9.18□□□□□ -0.94
CFHR3-204ENST00000461558 ATP11AP98196 1134 aa9.18□□□□□ -0.94
CFHR3-204ENST00000461558 HYAL2Q12891 473 aa9.18□□□□□ -0.94
CFHR3-204ENST00000461558 CAPN12Q6ZSI9 719 aa9.18□□□□□ -0.94
CFHR3-204ENST00000461558 GALNT11Q8NCW6 608 aa9.18□□□□□ -0.94
CFHR3-204ENST00000461558 MKNK1Q9BUB5 465 aa9.18□□□□□ -0.94
CFHR3-204ENST00000461558 LINC01387J3KSC0 135 aa9.17□□□□□ -0.94
CFHR3-204ENST00000461558 MED26O95402 600 aa9.17□□□□□ -0.94
CFHR3-204ENST00000461558 LCE1DQ5T752 114 aa9.17□□□□□ -0.94
CFHR3-204ENST00000461558 SPACA7Q96KW9 195 aa9.17□□□□□ -0.94
CFHR3-204ENST00000461558 UBL7Q96S82 380 aaPredicted RBP9.17□□□□□ -0.94
CFHR3-204ENST00000461558 LACRTQ9GZZ8 138 aa9.17□□□□□ -0.94
CFHR3-204ENST00000461558 CXXC1Q9P0U4 656 aaPredicted RBP9.17□□□□□ -0.94
CFHR3-204ENST00000461558 STOML1Q9UBI4 398 aa9.17□□□□□ -0.94
CFHR3-204ENST00000461558 RNF114Q9Y508 228 aa9.17□□□□□ -0.94
CFHR3-204ENST00000461558 WISP1O95388 367 aa9.16□□□□□ -0.94
CFHR3-204ENST00000461558 ZAP70P43403 619 aa9.16□□□□□ -0.94
CFHR3-204ENST00000461558 CEP135Q66GS9 1140 aa9.16□□□□□ -0.94
CFHR3-204ENST00000461558 FNDC3AQ9Y2H6 1198 aaKnown RBP9.16□□□□□ -0.94
CFHR3-204ENST00000461558 SMNDC1O75940 238 aaKnown RBP eCLIP9.15□□□□□ -0.94
CFHR3-204ENST00000461558 CDC27P30260 824 aa9.15□□□□□ -0.94
CFHR3-204ENST00000461558 CD68P34810 354 aaPredicted RBP9.15□□□□□ -0.94
CFHR3-204ENST00000461558 NAA30Q147X3 362 aaPredicted RBP9.15□□□□□ -0.94
CFHR3-204ENST00000461558 TXNDC11Q6PKC3 985 aa9.15□□□□□ -0.94
CFHR3-204ENST00000461558 DHX15O43143 795 aaKnown RBP9.14□□□□□ -0.95
CFHR3-204ENST00000461558 SCNN1AP37088 669 aa9.14□□□□□ -0.95
CFHR3-204ENST00000461558 TTC39BQ5VTQ0 682 aaPredicted RBP9.14□□□□□ -0.95
CFHR3-204ENST00000461558 ACAD11Q709F0 780 aa9.14□□□□□ -0.95
CFHR3-204ENST00000461558 GPR152Q8TDT2 470 aa9.14□□□□□ -0.95
CFHR3-204ENST00000461558 RASSF4Q9H2L5 321 aa9.14□□□□□ -0.95
CFHR3-204ENST00000461558 KCNK4Q9NYG8 393 aa9.14□□□□□ -0.95
CFHR3-204ENST00000461558 TM4SF5O14894 197 aa9.13□□□□□ -0.95
CFHR3-204ENST00000461558 KIF4AO95239 1232 aa9.13□□□□□ -0.95
CFHR3-204ENST00000461558 GRIK1P39086 918 aa9.13□□□□□ -0.95
CFHR3-204ENST00000461558 ADAMTSL4Q6UY14 1074 aa9.13□□□□□ -0.95
CFHR3-204ENST00000461558 CEP41Q9BYV8 373 aa9.13□□□□□ -0.95
CFHR3-204ENST00000461558 ABI2Q9NYB9 513 aaPredicted RBP9.13□□□□□ -0.95
CFHR3-204ENST00000461558 SRPK2P78362 688 aaKnown RBP9.12□□□□□ -0.95
CFHR3-204ENST00000461558 INTS5Q6P9B9 1019 aaKnown RBP9.12□□□□□ -0.95
CFHR3-204ENST00000461558 ARMC10Q8N2F6 343 aa9.12□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms