RNA–Protein interactions for RNA: ENST00000461326.1

CLK1-206, Transcript of CDC like kinase 1, humanhuman

TSL 2

Gene CLK1, Length 435 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK1-206ENST00000461326 RASA1P20936 1047 aa6.86□□□□□ -1.31
CLK1-206ENST00000461326 SRPK2P78362 688 aaKnown RBP6.86□□□□□ -1.31
CLK1-206ENST00000461326 INTS5Q6P9B9 1019 aaKnown RBP6.86□□□□□ -1.31
CLK1-206ENST00000461326 HINFPQ9BQA5 517 aa6.86□□□□□ -1.31
CLK1-206ENST00000461326 TLR7Q9NYK1 1049 aaKnown RBP6.86□□□□□ -1.31
CLK1-206ENST00000461326 KLK14Q9P0G3 267 aa6.86□□□□□ -1.31
CLK1-206ENST00000461326 MED26O95402 600 aa6.85□□□□□ -1.31
CLK1-206ENST00000461326 RFX1P22670 979 aa6.85□□□□□ -1.31
CLK1-206ENST00000461326 IGFBP4P22692 258 aa6.85□□□□□ -1.31
CLK1-206ENST00000461326 DGKZQ13574 1117 aa6.85□□□□□ -1.31
CLK1-206ENST00000461326 CACTIN-AS1Q8N1I8 211 aa6.85□□□□□ -1.31
CLK1-206ENST00000461326 PODXL2Q9NZ53 605 aa6.85□□□□□ -1.31
CLK1-206ENST00000461326 MICAL2O94851 1124 aa6.84□□□□□ -1.31
CLK1-206ENST00000461326 PSAPP07602 524 aa6.84□□□□□ -1.31
CLK1-206ENST00000461326 TRIM26Q12899 539 aaPredicted RBP6.84□□□□□ -1.31
CLK1-206ENST00000461326 FZD5Q13467 585 aa6.84□□□□□ -1.31
CLK1-206ENST00000461326 ELOAQ14241 798 aaKnown RBP6.84□□□□□ -1.31
CLK1-206ENST00000461326 ZC3HAV1Q7Z2W4 902 aaKnown RBP6.84□□□□□ -1.31
CLK1-206ENST00000461326 AGGF1Q8N302 714 aaeCLIP6.84□□□□□ -1.31
CLK1-206ENST00000461326 CEP41Q9BYV8 373 aa6.84□□□□□ -1.31
CLK1-206ENST00000461326 MUC3BQ9H195 1237 aa6.84□□□□□ -1.31
CLK1-206ENST00000461326 VRTNQ9H8Y1 702 aa6.84□□□□□ -1.31
CLK1-206ENST00000461326 LOC102724428A0A0B4J2F2 783 aa6.83□□□□□ -1.32
CLK1-206ENST00000461326 SIK1P57059 783 aa6.83□□□□□ -1.32
CLK1-206ENST00000461326 SETDB1Q15047 1291 aa6.83□□□□□ -1.32
CLK1-206ENST00000461326 LCE1DQ5T752 114 aa6.83□□□□□ -1.32
CLK1-206ENST00000461326 LARP1Q6PKG0 1096 aaKnown RBP6.83□□□□□ -1.32
CLK1-206ENST00000461326 J3QW42 95 aa6.82□□□□□ -1.32
CLK1-206ENST00000461326 EGFRP00533 1210 aa6.82□□□□□ -1.32
CLK1-206ENST00000461326 SPINK2P20155 84 aa6.82□□□□□ -1.32
CLK1-206ENST00000461326 NFIAQ12857 509 aa6.82□□□□□ -1.32
CLK1-206ENST00000461326 UVSSAQ2YD98 709 aa6.82□□□□□ -1.32
CLK1-206ENST00000461326 B4GALNT3Q6L9W6 998 aa6.82□□□□□ -1.32
CLK1-206ENST00000461326 ZDHHC13Q8IUH4 622 aa6.82□□□□□ -1.32
CLK1-206ENST00000461326 FAM196BA6NMK8 535 aa6.81□□□□□ -1.32
CLK1-206ENST00000461326 XYLBO75191 536 aa6.81□□□□□ -1.32
CLK1-206ENST00000461326 BRD1O95696 1058 aa6.81□□□□□ -1.32
CLK1-206ENST00000461326 SOX18P35713 384 aa6.81□□□□□ -1.32
CLK1-206ENST00000461326 C11orf91Q3C1V1 193 aa6.81□□□□□ -1.32
CLK1-206ENST00000461326 UTP4Q969X6 686 aaKnown RBP6.81□□□□□ -1.32
CLK1-206ENST00000461326 VTI1AQ96AJ9 217 aa6.81□□□□□ -1.32
CLK1-206ENST00000461326 NSUN5Q96P11 429 aaKnown RBP6.81□□□□□ -1.32
CLK1-206ENST00000461326 UBL7Q96S82 380 aaPredicted RBP6.81□□□□□ -1.32
CLK1-206ENST00000461326 KRTAP4-7Q9BYR0 210 aa6.81□□□□□ -1.32
CLK1-206ENST00000461326 RTCBQ9Y3I0 505 aaKnown RBP6.81□□□□□ -1.32
CLK1-206ENST00000461326 WNT11O96014 354 aa6.8□□□□□ -1.32
CLK1-206ENST00000461326 KCNA1Q09470 495 aa6.8□□□□□ -1.32
CLK1-206ENST00000461326 KANK4Q5T7N3 995 aaPredicted RBP6.8□□□□□ -1.32
CLK1-206ENST00000461326 DBNDD2Q9BQY9 259 aa6.8□□□□□ -1.32
CLK1-206ENST00000461326 PPME1Q9Y570 386 aa6.8□□□□□ -1.32
CLK1-206ENST00000461326 HOXD8P13378 290 aaPredicted RBP6.79□□□□□ -1.32
CLK1-206ENST00000461326 ACAD11Q709F0 780 aa6.79□□□□□ -1.32
CLK1-206ENST00000461326 DTX1Q86Y01 620 aa6.79□□□□□ -1.32
CLK1-206ENST00000461326 ARMC10Q8N2F6 343 aa6.79□□□□□ -1.32
CLK1-206ENST00000461326 QTRT2Q9H974 415 aaKnown RBP6.79□□□□□ -1.32
CLK1-206ENST00000461326 UTP3Q9NQZ2 479 aaKnown RBP eCLIP6.79□□□□□ -1.32
CLK1-206ENST00000461326 FOXO3O43524 673 aa6.78□□□□□ -1.32
CLK1-206ENST00000461326 MMP20O60882 483 aa6.78□□□□□ -1.32
CLK1-206ENST00000461326 RNF43Q68DV7 783 aa6.78□□□□□ -1.32
CLK1-206ENST00000461326 CMTR1Q8N1G2 835 aaKnown RBP6.78□□□□□ -1.32
CLK1-206ENST00000461326 MYO19Q96H55 970 aa6.78□□□□□ -1.32
CLK1-206ENST00000461326 C7orf69Q9H7B7 122 aa6.78□□□□□ -1.32
CLK1-206ENST00000461326 TRIM33Q9UPN9 1127 aa6.78□□□□□ -1.32
CLK1-206ENST00000461326 LGR5O75473 907 aa6.77□□□□□ -1.33
CLK1-206ENST00000461326 CD68P34810 354 aaPredicted RBP6.77□□□□□ -1.33
CLK1-206ENST00000461326 DPYDQ12882 1025 aa6.77□□□□□ -1.33
CLK1-206ENST00000461326 AEBP1Q8IUX7 1158 aa6.77□□□□□ -1.33
CLK1-206ENST00000461326 TRIM42Q8IWZ5 723 aa6.77□□□□□ -1.33
CLK1-206ENST00000461326 RGL4Q8IZJ4 473 aa6.77□□□□□ -1.33
CLK1-206ENST00000461326 USP20Q9Y2K6 914 aa6.77□□□□□ -1.33
CLK1-206ENST00000461326 CCDC9Q9Y3X0 531 aaKnown RBP6.77□□□□□ -1.33
CLK1-206ENST00000461326 TMEM88BA6NKF7 163 aa6.76□□□□□ -1.33
CLK1-206ENST00000461326 USP17L15C9J2P7 530 aa6.76□□□□□ -1.33
CLK1-206ENST00000461326 USP17L10C9JJH3 530 aa6.76□□□□□ -1.33
CLK1-206ENST00000461326 USP17L13C9JLJ4 530 aa6.76□□□□□ -1.33
CLK1-206ENST00000461326 USP17L12C9JPN9 530 aa6.76□□□□□ -1.33
CLK1-206ENST00000461326 USP17L11C9JVI0 530 aa6.76□□□□□ -1.33
CLK1-206ENST00000461326 USP17L21D6R901 530 aa6.76□□□□□ -1.33
CLK1-206ENST00000461326 USP17L18D6R9N7 530 aa6.76□□□□□ -1.33
CLK1-206ENST00000461326 USP17L22D6RA61 530 aa6.76□□□□□ -1.33
CLK1-206ENST00000461326 USP17L17D6RBQ6 530 aa6.76□□□□□ -1.33
CLK1-206ENST00000461326 USP17L19D6RCP7 530 aa6.76□□□□□ -1.33
CLK1-206ENST00000461326 USP17L20D6RJB6 530 aa6.76□□□□□ -1.33
CLK1-206ENST00000461326 LINC01387J3KSC0 135 aa6.76□□□□□ -1.33
CLK1-206ENST00000461326 OPLAHO14841 1288 aa6.76□□□□□ -1.33
CLK1-206ENST00000461326 ADAMTS4O75173 837 aa6.76□□□□□ -1.33
CLK1-206ENST00000461326 USP17L24Q0WX57 530 aa6.76□□□□□ -1.33
CLK1-206ENST00000461326 MYRFLQ96LU7 910 aa6.76□□□□□ -1.33
CLK1-206ENST00000461326 NOVA2Q9UNW9 492 aaKnown RBP6.76□□□□□ -1.33
CLK1-206ENST00000461326 HMX2A2RU54 273 aa6.75□□□□□ -1.33
CLK1-206ENST00000461326 PRR19A6NJB7 356 aa6.75□□□□□ -1.33
CLK1-206ENST00000461326 WISP1O95388 367 aa6.75□□□□□ -1.33
CLK1-206ENST00000461326 PTK7Q13308 1070 aa6.75□□□□□ -1.33
CLK1-206ENST00000461326 TREML1Q86YW5 311 aa6.75□□□□□ -1.33
CLK1-206ENST00000461326 GALNT11Q8NCW6 608 aa6.75□□□□□ -1.33
CLK1-206ENST00000461326 FAM46AQ96IP4 442 aaKnown RBP6.75□□□□□ -1.33
CLK1-206ENST00000461326 CRTC2Q53ET0 693 aaPredicted RBP6.74□□□□□ -1.33
CLK1-206ENST00000461326 FAM117BQ6P1L5 589 aa6.74□□□□□ -1.33
CLK1-206ENST00000461326 NLRP13Q86W25 1043 aa6.74□□□□□ -1.33
CLK1-206ENST00000461326 CLEC10AQ8IUN9 316 aa6.74□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms