RNA–Protein interactions for RNA: ENST00000461004.1

RTN4-212, Transcript of reticulon 4, humanhuman

TSL 3

Gene RTN4, Length 422 nt, Biotype processed transcript, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4-212ENST00000461004 BICDL1Q6ZP65 573 aa9.44□□□□□ -0.9
RTN4-212ENST00000461004 DZIP3Q86Y13 1208 aaKnown RBP9.44□□□□□ -0.9
RTN4-212ENST00000461004 WNT2BQ93097 391 aa9.44□□□□□ -0.9
RTN4-212ENST00000461004 LRCH3Q96II8 777 aa9.44□□□□□ -0.9
RTN4-212ENST00000461004 TBC1D2Q9BYX2 928 aa9.44□□□□□ -0.9
RTN4-212ENST00000461004 CDKN2AIPQ9NXV6 580 aaPredicted RBP9.44□□□□□ -0.9
RTN4-212ENST00000461004 C4AP0C0L4 1744 aa9.44□□□□□ -0.9
RTN4-212ENST00000461004 A0A087WZG4 1122 aa9.43□□□□□ -0.9
RTN4-212ENST00000461004 RNF40O75150 1001 aa9.43□□□□□ -0.9
RTN4-212ENST00000461004 VAMP4O75379 141 aa9.43□□□□□ -0.9
RTN4-212ENST00000461004 TM4SF1P30408 202 aa9.43□□□□□ -0.9
RTN4-212ENST00000461004 GCGRP47871 477 aa9.43□□□□□ -0.9
RTN4-212ENST00000461004 AIMP1Q12904 312 aaKnown RBP9.43□□□□□ -0.9
RTN4-212ENST00000461004 NFIXQ14938 502 aa9.43□□□□□ -0.9
RTN4-212ENST00000461004 TWISTNBQ3B726 338 aaPredicted RBP9.43□□□□□ -0.9
RTN4-212ENST00000461004 TBC1D9BQ66K14 1250 aa9.43□□□□□ -0.9
RTN4-212ENST00000461004 SLF2Q8IX21 1173 aa9.43□□□□□ -0.9
RTN4-212ENST00000461004 ANKK1Q8NFD2 765 aa9.43□□□□□ -0.9
RTN4-212ENST00000461004 SPIRE2Q8WWL2 714 aa9.43□□□□□ -0.9
RTN4-212ENST00000461004 GOLGA8CPA6NN73 597 aa9.42□□□□□ -0.9
RTN4-212ENST00000461004 MYSM1Q5VVJ2 828 aa9.42□□□□□ -0.9
RTN4-212ENST00000461004 COPS6Q7L5N1 327 aa9.42□□□□□ -0.9
RTN4-212ENST00000461004 NLGN1Q8N2Q7 840 aa9.42□□□□□ -0.9
RTN4-212ENST00000461004 CCDC24Q8N4L8 307 aa9.42□□□□□ -0.9
RTN4-212ENST00000461004 XAGE3Q8WTP9 111 aa9.42□□□□□ -0.9
RTN4-212ENST00000461004 ZBTB3Q9H5J0 574 aa9.42□□□□□ -0.9
RTN4-212ENST00000461004 PHAXQ9H814 394 aaKnown RBP9.42□□□□□ -0.9
RTN4-212ENST00000461004 DDX21Q9NR30 783 aaKnown RBP eCLIP9.42□□□□□ -0.9
RTN4-212ENST00000461004 PPP1R1BQ9UD71 204 aaPredicted RBP9.42□□□□□ -0.9
RTN4-212ENST00000461004 LAMB4A4D0S4 1761 aa9.42□□□□□ -0.9
RTN4-212ENST00000461004 E9PSI1 815 aa9.41□□□□□ -0.9
RTN4-212ENST00000461004 POLRMTO00411 1230 aaKnown RBP9.41□□□□□ -0.9
RTN4-212ENST00000461004 HOXB7P09629 217 aa9.41□□□□□ -0.9
RTN4-212ENST00000461004 POLD1P28340 1107 aa9.41□□□□□ -0.9
RTN4-212ENST00000461004 G2E3Q7L622 706 aa9.41□□□□□ -0.9
RTN4-212ENST00000461004 TRMT2AQ8IZ69 625 aaKnown RBP9.41□□□□□ -0.9
RTN4-212ENST00000461004 ZNF428Q96B54 188 aa9.41□□□□□ -0.9
RTN4-212ENST00000461004 FHDC1Q9C0D6 1143 aaPredicted RBP9.41□□□□□ -0.9
RTN4-212ENST00000461004 MYH16Q9H6N6 1097 aa9.41□□□□□ -0.9
RTN4-212ENST00000461004 COL24A1Q17RW2 1714 aa9.41□□□□□ -0.9
RTN4-212ENST00000461004 LRP5O75197 1615 aa9.41□□□□□ -0.9
RTN4-212ENST00000461004 ERBB4Q15303 1308 aa9.4□□□□□ -0.9
RTN4-212ENST00000461004 MAP3K15Q6ZN16 1313 aa9.4□□□□□ -0.9
RTN4-212ENST00000461004 CFHP08603 1231 aa9.4□□□□□ -0.9
RTN4-212ENST00000461004 SH3D19Q5HYK7 790 aa9.4□□□□□ -0.9
RTN4-212ENST00000461004 NPM2Q86SE8 214 aaKnown RBP9.4□□□□□ -0.9
RTN4-212ENST00000461004 NLGN2Q8NFZ4 835 aa9.4□□□□□ -0.9
RTN4-212ENST00000461004 KCTD12Q96CX2 325 aaKnown RBP9.4□□□□□ -0.9
RTN4-212ENST00000461004 SYT17Q9BSW7 474 aa9.4□□□□□ -0.9
RTN4-212ENST00000461004 HPS5Q9UPZ3 1129 aa9.4□□□□□ -0.9
RTN4-212ENST00000461004 FAM177BA6PVY3 158 aa9.39□□□□□ -0.91
RTN4-212ENST00000461004 SERPINB2P05120 415 aa9.39□□□□□ -0.91
RTN4-212ENST00000461004 GPTP24298 496 aa9.39□□□□□ -0.91
RTN4-212ENST00000461004 CCDC30Q5VVM6 783 aa9.39□□□□□ -0.91
RTN4-212ENST00000461004 THSD4Q6ZMP0 1018 aa9.39□□□□□ -0.91
RTN4-212ENST00000461004 PROCA1Q8NCQ7 364 aaPredicted RBP9.39□□□□□ -0.91
RTN4-212ENST00000461004 HLA-CQ95604 372 aa9.39□□□□□ -0.91
RTN4-212ENST00000461004 POLR3EQ9NVU0 708 aa9.39□□□□□ -0.91
RTN4-212ENST00000461004 DBF4Q9UBU7 674 aaPredicted RBP9.39□□□□□ -0.91
RTN4-212ENST00000461004 WWC3Q9ULE0 1092 aa9.39□□□□□ -0.91
RTN4-212ENST00000461004 PARP3Q9Y6F1 533 aa9.39□□□□□ -0.91
RTN4-212ENST00000461004 MOXD2PA6NHM9 499 aa9.38□□□□□ -0.91
RTN4-212ENST00000461004 ERVV-1B6SEH8 477 aa9.38□□□□□ -0.91
RTN4-212ENST00000461004 KDM4AO75164 1064 aa9.38□□□□□ -0.91
RTN4-212ENST00000461004 NDUFV2P19404 249 aa9.38□□□□□ -0.91
RTN4-212ENST00000461004 APLP1P51693 650 aa9.38□□□□□ -0.91
RTN4-212ENST00000461004 KIF6Q6ZMV9 814 aa9.38□□□□□ -0.91
RTN4-212ENST00000461004 GOPCQ9HD26 462 aa9.38□□□□□ -0.91
RTN4-212ENST00000461004 HYPKQ9NX55 129 aa9.38□□□□□ -0.91
RTN4-212ENST00000461004 WBP1LQ9NX94 342 aa9.38□□□□□ -0.91
RTN4-212ENST00000461004 LIMD1Q9UGP4 676 aa9.38□□□□□ -0.91
RTN4-212ENST00000461004 NIP7Q9Y221 180 aaKnown RBP eCLIP9.38□□□□□ -0.91
RTN4-212ENST00000461004 CARMIL3Q8ND23 1372 aa9.37□□□□□ -0.91
RTN4-212ENST00000461004 UBN2Q6ZU65 1347 aa9.37□□□□□ -0.91
RTN4-212ENST00000461004 SKIV2LQ15477 1246 aaKnown RBP9.37□□□□□ -0.91
RTN4-212ENST00000461004 SUSD4Q5VX71 490 aa9.37□□□□□ -0.91
RTN4-212ENST00000461004 CLEC4GQ6UXB4 293 aa9.37□□□□□ -0.91
RTN4-212ENST00000461004 SPNS2Q8IVW8 549 aa9.37□□□□□ -0.91
RTN4-212ENST00000461004 SETDB2Q96T68 719 aa9.37□□□□□ -0.91
RTN4-212ENST00000461004 BCL2L13Q9BXK5 485 aa9.37□□□□□ -0.91
RTN4-212ENST00000461004 TSR3Q9UJK0 312 aaKnown RBP9.37□□□□□ -0.91
RTN4-212ENST00000461004 SCN7AQ01118 1682 aa9.36□□□□□ -0.91
RTN4-212ENST00000461004 A0A0G2JLW4 131 aa9.36□□□□□ -0.91
RTN4-212ENST00000461004 ATP5J2-PTCD1G3V325 749 aa9.36□□□□□ -0.91
RTN4-212ENST00000461004 HOXA2O43364 376 aa9.36□□□□□ -0.91
RTN4-212ENST00000461004 GUCA2AQ02747 115 aa9.36□□□□□ -0.91
RTN4-212ENST00000461004 FUT2Q10981 343 aa9.36□□□□□ -0.91
RTN4-212ENST00000461004 PRR5LQ6MZQ0 368 aa9.36□□□□□ -0.91
RTN4-212ENST00000461004 NUTM1Q86Y26 1132 aa9.36□□□□□ -0.91
RTN4-212ENST00000461004 ZNF34Q8IZ26 560 aa9.36□□□□□ -0.91
RTN4-212ENST00000461004 SYNE4Q8N205 404 aa9.36□□□□□ -0.91
RTN4-212ENST00000461004 PLBD2Q8NHP8 589 aa9.36□□□□□ -0.91
RTN4-212ENST00000461004 SSH1Q8WYL5 1049 aa9.36□□□□□ -0.91
RTN4-212ENST00000461004 PCDH10Q9P2E7 1040 aa9.36□□□□□ -0.91
RTN4-212ENST00000461004 BCORQ6W2J9 1755 aa9.36□□□□□ -0.91
RTN4-212ENST00000461004 ZBED9Q6R2W3 1325 aa9.35□□□□□ -0.91
RTN4-212ENST00000461004 PI4KAP2A4QPH2 592 aa9.35□□□□□ -0.91
RTN4-212ENST00000461004 CHRNA5P30532 468 aa9.35□□□□□ -0.91
RTN4-212ENST00000461004 SLC4A3P48751 1232 aa9.35□□□□□ -0.91
RTN4-212ENST00000461004 PPP4CP60510 307 aa9.35□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 23 ms