RNA–Protein interactions for RNA: ENST00000460790.1

CSDC2-202, Transcript of cold shock domain containing C2, humanhuman

TSL 3

Gene CSDC2, Length 721 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDC2-202ENST00000460790 RPGRQ92834 1020 aaKnown RBP13.39□□□□□ -0.27
CSDC2-202ENST00000460790 AKAP2Q9Y2D5 859 aa13.39□□□□□ -0.27
CSDC2-202ENST00000460790 COL4A1P02462 1669 aa13.39□□□□□ -0.27
CSDC2-202ENST00000460790 GRAPQ13588 217 aa13.38□□□□□ -0.27
CSDC2-202ENST00000460790 GRAPLQ8TC17 118 aaPredicted RBP13.38□□□□□ -0.27
CSDC2-202ENST00000460790 RBM17Q96I25 401 aaKnown RBP13.38□□□□□ -0.27
CSDC2-202ENST00000460790 CRAMP1Q96RY5 1269 aa13.38□□□□□ -0.27
CSDC2-202ENST00000460790 CCDC8Q9H0W5 538 aaPredicted RBP13.38□□□□□ -0.27
CSDC2-202ENST00000460790 AOX1Q06278 1338 aa13.38□□□□□ -0.27
CSDC2-202ENST00000460790 PDE8BO95263 885 aa13.37□□□□□ -0.27
CSDC2-202ENST00000460790 SRGNP10124 158 aa13.37□□□□□ -0.27
CSDC2-202ENST00000460790 TIMM10P62072 90 aa13.37□□□□□ -0.27
CSDC2-202ENST00000460790 TTC22Q5TAA0 569 aa13.37□□□□□ -0.27
CSDC2-202ENST00000460790 MTFR1LQ9H019 292 aa13.37□□□□□ -0.27
CSDC2-202ENST00000460790 MINPP1Q9UNW1 487 aa13.37□□□□□ -0.27
CSDC2-202ENST00000460790 TTC41PQ6P2S7 1318 aa13.37□□□□□ -0.27
CSDC2-202ENST00000460790 A0A1B0GUL7 405 aa13.36□□□□□ -0.27
CSDC2-202ENST00000460790 BBOX1O75936 387 aa13.36□□□□□ -0.27
CSDC2-202ENST00000460790 ZBTB7AO95365 584 aa13.36□□□□□ -0.27
CSDC2-202ENST00000460790 NPR1P16066 1061 aa13.36□□□□□ -0.27
CSDC2-202ENST00000460790 CHRNDQ07001 517 aa13.36□□□□□ -0.27
CSDC2-202ENST00000460790 BMP2KLQ5H9B9 411 aa13.36□□□□□ -0.27
CSDC2-202ENST00000460790 HELBQ8NG08 1087 aaPredicted RBP13.36□□□□□ -0.27
CSDC2-202ENST00000460790 NEUROD6Q96NK8 337 aa13.36□□□□□ -0.27
CSDC2-202ENST00000460790 ECHDC1Q9NTX5 307 aa13.36□□□□□ -0.27
CSDC2-202ENST00000460790 DBNLQ9UJU6 430 aaKnown RBP13.36□□□□□ -0.27
CSDC2-202ENST00000460790 A0A1B0GUL6 1792 aa13.35□□□□□ -0.27
CSDC2-202ENST00000460790 FGFR2P21802 821 aa13.35□□□□□ -0.27
CSDC2-202ENST00000460790 ATP2B3Q16720 1220 aa13.35□□□□□ -0.27
CSDC2-202ENST00000460790 PI4K2BQ8TCG2 481 aa13.35□□□□□ -0.27
CSDC2-202ENST00000460790 MASTLQ96GX5 879 aa13.35□□□□□ -0.27
CSDC2-202ENST00000460790 GPATCH3Q96I76 525 aa13.35□□□□□ -0.27
CSDC2-202ENST00000460790 DBNDD2Q9BQY9 259 aa13.35□□□□□ -0.27
CSDC2-202ENST00000460790 TLR7Q9NYK1 1049 aaKnown RBP13.35□□□□□ -0.27
CSDC2-202ENST00000460790 ATF5Q9Y2D1 282 aaPredicted RBP13.35□□□□□ -0.27
CSDC2-202ENST00000460790 ZNF609O15014 1411 aa13.35□□□□□ -0.27
CSDC2-202ENST00000460790 PSDA5PKW4 1024 aaPredicted RBP13.34□□□□□ -0.27
CSDC2-202ENST00000460790 ERC2O15083 957 aa13.34□□□□□ -0.27
CSDC2-202ENST00000460790 TAF5LO75529 589 aa13.34□□□□□ -0.27
CSDC2-202ENST00000460790 GLRX3O76003 335 aaKnown RBP13.34□□□□□ -0.27
CSDC2-202ENST00000460790 GSPT1P15170 499 aaKnown RBP13.34□□□□□ -0.27
CSDC2-202ENST00000460790 ALDH1B1P30837 517 aa13.34□□□□□ -0.27
CSDC2-202ENST00000460790 PUM3Q15397 648 aaKnown RBP13.34□□□□□ -0.27
CSDC2-202ENST00000460790 TSHZ3Q63HK5 1081 aa13.34□□□□□ -0.27
CSDC2-202ENST00000460790 LPIN2Q92539 896 aa13.34□□□□□ -0.27
CSDC2-202ENST00000460790 ANKRD2Q9GZV1 360 aa13.34□□□□□ -0.27
CSDC2-202ENST00000460790 KIF13BQ9NQT8 1826 aa13.34□□□□□ -0.27
CSDC2-202ENST00000460790 AK9Q5TCS8 1911 aa13.33□□□□□ -0.28
CSDC2-202ENST00000460790 H0YIN7 160 aa13.33□□□□□ -0.28
CSDC2-202ENST00000460790 ATP5JP18859 108 aa13.33□□□□□ -0.28
CSDC2-202ENST00000460790 POLD1P28340 1107 aa13.33□□□□□ -0.28
CSDC2-202ENST00000460790 UBE4AQ14139 1066 aa13.33□□□□□ -0.28
CSDC2-202ENST00000460790 STYK1Q6J9G0 422 aa13.33□□□□□ -0.28
CSDC2-202ENST00000460790 TMC4Q7Z404 712 aa13.33□□□□□ -0.28
CSDC2-202ENST00000460790 C2CD5Q86YS7 1000 aa13.33□□□□□ -0.28
CSDC2-202ENST00000460790 XAGE2Q96GT9 111 aa13.33□□□□□ -0.28
CSDC2-202ENST00000460790 COL11A2P13942 1736 aaPredicted RBP13.33□□□□□ -0.28
CSDC2-202ENST00000460790 C10orf71Q711Q0 1435 aa13.32□□□□□ -0.28
CSDC2-202ENST00000460790 SLC5A1P13866 664 aa13.32□□□□□ -0.28
CSDC2-202ENST00000460790 ADORA1P30542 326 aa13.32□□□□□ -0.28
CSDC2-202ENST00000460790 SP8Q8IXZ3 490 aa13.32□□□□□ -0.28
CSDC2-202ENST00000460790 SGIP1Q9BQI5 828 aa13.32□□□□□ -0.28
CSDC2-202ENST00000460790 ARAP2Q8WZ64 1704 aa13.31□□□□□ -0.28
CSDC2-202ENST00000460790 SNAP23O00161 211 aa13.31□□□□□ -0.28
CSDC2-202ENST00000460790 IFIT1P09914 478 aaKnown RBP13.31□□□□□ -0.28
CSDC2-202ENST00000460790 SDSP20132 328 aa13.31□□□□□ -0.28
CSDC2-202ENST00000460790 C8orf34Q49A92 452 aa13.31□□□□□ -0.28
CSDC2-202ENST00000460790 CCDC158Q5M9N0 1113 aa13.31□□□□□ -0.28
CSDC2-202ENST00000460790 ZNF622Q969S3 477 aaKnown RBP eCLIP13.31□□□□□ -0.28
CSDC2-202ENST00000460790 CACNA1SQ13698 1873 aa13.31□□□□□ -0.28
CSDC2-202ENST00000460790 SLX4Q8IY92 1834 aa13.3□□□□□ -0.28
CSDC2-202ENST00000460790 CHRNA5P30532 468 aa13.3□□□□□ -0.28
CSDC2-202ENST00000460790 GORABQ5T7V8 394 aa13.3□□□□□ -0.28
CSDC2-202ENST00000460790 PPIL4Q8WUA2 492 aaKnown RBP eCLIP13.3□□□□□ -0.28
CSDC2-202ENST00000460790 CNKSR1Q969H4 720 aa13.3□□□□□ -0.28
CSDC2-202ENST00000460790 ZNF512BQ96KM6 892 aaPredicted RBP13.3□□□□□ -0.28
CSDC2-202ENST00000460790 BACH2Q9BYV9 841 aa13.3□□□□□ -0.28
CSDC2-202ENST00000460790 BOLA2Q9H3K6 86 aa13.3□□□□□ -0.28
CSDC2-202ENST00000460790 LEMD3Q9Y2U8 911 aa13.3□□□□□ -0.28
CSDC2-202ENST00000460790 ATP6V0A2Q9Y487 856 aa13.3□□□□□ -0.28
CSDC2-202ENST00000460790 AKAP11Q9UKA4 1901 aa13.3□□□□□ -0.28
CSDC2-202ENST00000460790 DLEC1Q9Y238 1755 aa13.3□□□□□ -0.28
CSDC2-202ENST00000460790 PPEF1O14829 653 aaPredicted RBP13.29□□□□□ -0.28
CSDC2-202ENST00000460790 PTGER2P43116 358 aa13.29□□□□□ -0.28
CSDC2-202ENST00000460790 PODXL2Q9NZ53 605 aa13.29□□□□□ -0.28
CSDC2-202ENST00000460790 ANKIB1Q9P2G1 1089 aa13.29□□□□□ -0.28
CSDC2-202ENST00000460790 LRRC37AA6NMS7 1700 aa13.29□□□□□ -0.28
CSDC2-202ENST00000460790 XDHP47989 1333 aa13.29□□□□□ -0.28
CSDC2-202ENST00000460790 WTIPA6NIX2 430 aaPredicted RBP13.28□□□□□ -0.28
CSDC2-202ENST00000460790 TRIM6-TRIM34B2RNG4 842 aa13.28□□□□□ -0.28
CSDC2-202ENST00000460790 MAP4K4O95819 1239 aaPredicted RBP13.28□□□□□ -0.28
CSDC2-202ENST00000460790 KCNA3P22001 575 aa13.28□□□□□ -0.28
CSDC2-202ENST00000460790 KCNJ4P48050 445 aa13.28□□□□□ -0.28
CSDC2-202ENST00000460790 TGFB2P61812 414 aa13.28□□□□□ -0.28
CSDC2-202ENST00000460790 GPSM2P81274 684 aa13.28□□□□□ -0.28
CSDC2-202ENST00000460790 TTC39AQ5SRH9 613 aa13.28□□□□□ -0.28
CSDC2-202ENST00000460790 CCDC102BQ68D86 513 aa13.28□□□□□ -0.28
CSDC2-202ENST00000460790 CNTROBQ8N137 903 aa13.28□□□□□ -0.28
CSDC2-202ENST00000460790 RILPL2Q969X0 211 aa13.28□□□□□ -0.28
CSDC2-202ENST00000460790 HAUS7Q99871 368 aa13.28□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms