RNA–Protein interactions for RNA: ENST00000460485.1

ERCC3-205, Transcript of ERCC excision repair 3, TFIIH core complex helicase subunit, humanhuman

TSL 3

Gene ERCC3, Length 815 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC3-205ENST00000460485 CYP19A1P11511 503 aaPredicted RBP16.98■□□□□ 0.31
ERCC3-205ENST00000460485 PIP4K2AP48426 406 aaPredicted RBP16.98■□□□□ 0.31
ERCC3-205ENST00000460485 NEK4P51957 841 aa16.98■□□□□ 0.31
ERCC3-205ENST00000460485 RNF20Q5VTR2 975 aa16.98■□□□□ 0.31
ERCC3-205ENST00000460485 ZBTB38Q8NAP3 1195 aaPredicted RBP16.98■□□□□ 0.31
ERCC3-205ENST00000460485 SIL1Q9H173 461 aa16.98■□□□□ 0.31
ERCC3-205ENST00000460485 HMG20BQ9P0W2 317 aa16.98■□□□□ 0.31
ERCC3-205ENST00000460485 ISY1Q9ULR0 285 aaKnown RBP16.98■□□□□ 0.31
ERCC3-205ENST00000460485 AKAP2Q9Y2D5 859 aa16.98■□□□□ 0.31
ERCC3-205ENST00000460485 PALLDQ8WX93 1383 aa16.98■□□□□ 0.31
ERCC3-205ENST00000460485 MED23Q9ULK4 1368 aa16.98■□□□□ 0.31
ERCC3-205ENST00000460485 CCDC171Q6TFL3 1326 aa16.97■□□□□ 0.31
ERCC3-205ENST00000460485 WDR90Q96KV7 1748 aa16.97■□□□□ 0.31
ERCC3-205ENST00000460485 PDIA4P13667 645 aaKnown RBP16.97■□□□□ 0.31
ERCC3-205ENST00000460485 ZKSCAN1P17029 563 aaPredicted RBP16.97■□□□□ 0.31
ERCC3-205ENST00000460485 FSTL1Q12841 308 aa16.97■□□□□ 0.31
ERCC3-205ENST00000460485 CUL4AQ13619 759 aa16.97■□□□□ 0.31
ERCC3-205ENST00000460485 TNS4Q8IZW8 715 aa16.97■□□□□ 0.31
ERCC3-205ENST00000460485 FSD1Q9BTV5 496 aa16.97■□□□□ 0.31
ERCC3-205ENST00000460485 TFCP2Q12800 502 aa16.96■□□□□ 0.31
ERCC3-205ENST00000460485 CCDC57Q2TAC2 916 aa16.96■□□□□ 0.31
ERCC3-205ENST00000460485 SPRYD3Q8NCJ5 442 aa16.96■□□□□ 0.31
ERCC3-205ENST00000460485 PSMA5P28066 241 aa16.95■□□□□ 0.3
ERCC3-205ENST00000460485 SSFA2P28290 1259 aa16.95■□□□□ 0.3
ERCC3-205ENST00000460485 TGFB2P61812 414 aa16.95■□□□□ 0.3
ERCC3-205ENST00000460485 CWC27Q6UX04 472 aaKnown RBP16.95■□□□□ 0.3
ERCC3-205ENST00000460485 TNPO1Q92973 898 aaKnown RBP16.95■□□□□ 0.3
ERCC3-205ENST00000460485 HAUS7Q99871 368 aa16.95■□□□□ 0.3
ERCC3-205ENST00000460485 CCDC8Q9H0W5 538 aaPredicted RBP16.95■□□□□ 0.3
ERCC3-205ENST00000460485 DBNLQ9UJU6 430 aaKnown RBP16.95■□□□□ 0.3
ERCC3-205ENST00000460485 PCNTO95613 3336 aa16.94■□□□□ 0.3
ERCC3-205ENST00000460485 CSF1RP07333 972 aa16.94■□□□□ 0.3
ERCC3-205ENST00000460485 CHMP3Q9Y3E7 222 aa16.94■□□□□ 0.3
ERCC3-205ENST00000460485 C4BP0C0L5 1744 aa16.93■□□□□ 0.3
ERCC3-205ENST00000460485 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP16.93■□□□□ 0.3
ERCC3-205ENST00000460485 CAPN15O75808 1086 aa16.93■□□□□ 0.3
ERCC3-205ENST00000460485 MAP4K4O95819 1239 aaPredicted RBP16.93■□□□□ 0.3
ERCC3-205ENST00000460485 CYP2E1P05181 493 aaPredicted RBP16.93■□□□□ 0.3
ERCC3-205ENST00000460485 KRT32Q14532 448 aa16.93■□□□□ 0.3
ERCC3-205ENST00000460485 ATG9AQ7Z3C6 839 aa16.93■□□□□ 0.3
ERCC3-205ENST00000460485 TMX3Q96JJ7 454 aa16.93■□□□□ 0.3
ERCC3-205ENST00000460485 ZSCAN31Q96LW9 406 aaPredicted RBP16.93■□□□□ 0.3
ERCC3-205ENST00000460485 NMRK2Q9NPI5 230 aa16.93■□□□□ 0.3
ERCC3-205ENST00000460485 WWC3Q9ULE0 1092 aa16.93■□□□□ 0.3
ERCC3-205ENST00000460485 SNX14Q9Y5W7 946 aa16.93■□□□□ 0.3
ERCC3-205ENST00000460485 SCN7AQ01118 1682 aa16.93■□□□□ 0.3
ERCC3-205ENST00000460485 SH3TC1Q8TE82 1336 aa16.93■□□□□ 0.3
ERCC3-205ENST00000460485 UBR3Q6ZT12 1888 aa16.93■□□□□ 0.3
ERCC3-205ENST00000460485 IFIT5Q13325 482 aaKnown RBP16.92■□□□□ 0.3
ERCC3-205ENST00000460485 PARP10Q53GL7 1025 aa16.92■□□□□ 0.3
ERCC3-205ENST00000460485 VPS53Q5VIR6 699 aa16.92■□□□□ 0.3
ERCC3-205ENST00000460485 NLRP10Q86W26 655 aa16.92■□□□□ 0.3
ERCC3-205ENST00000460485 AMIGO3Q86WK7 504 aa16.92■□□□□ 0.3
ERCC3-205ENST00000460485 MAP4K1Q92918 833 aa16.92■□□□□ 0.3
ERCC3-205ENST00000460485 SH2B1Q9NRF2 756 aaPredicted RBP16.92■□□□□ 0.3
ERCC3-205ENST00000460485 CCDC87Q9NVE4 849 aa16.92■□□□□ 0.3
ERCC3-205ENST00000460485 CEP126Q9P2H0 1117 aa16.92■□□□□ 0.3
ERCC3-205ENST00000460485 PALD1Q9ULE6 856 aa16.92■□□□□ 0.3
ERCC3-205ENST00000460485 NMIQ13287 307 aaPredicted RBP16.91■□□□□ 0.3
ERCC3-205ENST00000460485 ANKRD1Q15327 319 aa16.91■□□□□ 0.3
ERCC3-205ENST00000460485 TSGA10IPQ3SY00 556 aa16.91■□□□□ 0.3
ERCC3-205ENST00000460485 KBTBD3Q8NAB2 608 aa16.91■□□□□ 0.3
ERCC3-205ENST00000460485 KLHDC4Q8TBB5 520 aa16.91■□□□□ 0.3
ERCC3-205ENST00000460485 ALDH8A1Q9H2A2 487 aaPredicted RBP16.91■□□□□ 0.3
ERCC3-205ENST00000460485 BOLA2Q9H3K6 86 aa16.91■□□□□ 0.3
ERCC3-205ENST00000460485 TLR7Q9NYK1 1049 aaKnown RBP16.91■□□□□ 0.3
ERCC3-205ENST00000460485 RTL9Q8NET4 1388 aa16.9■□□□□ 0.3
ERCC3-205ENST00000460485 RPAP1Q9BWH6 1393 aaPredicted RBP16.9■□□□□ 0.3
ERCC3-205ENST00000460485 DDX60Q8IY21 1712 aaKnown RBP16.9■□□□□ 0.3
ERCC3-205ENST00000460485 NECTIN1Q15223 517 aa16.9■□□□□ 0.3
ERCC3-205ENST00000460485 L1TD1Q5T7N2 865 aaKnown RBP16.9■□□□□ 0.3
ERCC3-205ENST00000460485 DZIP3Q86Y13 1208 aaKnown RBP16.9■□□□□ 0.3
ERCC3-205ENST00000460485 TTC14Q96N46 770 aa16.9■□□□□ 0.3
ERCC3-205ENST00000460485 HELLSQ9NRZ9 838 aa16.9■□□□□ 0.3
ERCC3-205ENST00000460485 ZSCAN21Q9Y5A6 473 aaPredicted RBP16.9■□□□□ 0.3
ERCC3-205ENST00000460485 KIF13BQ9NQT8 1826 aa16.9■□□□□ 0.3
ERCC3-205ENST00000460485 MYH14Q7Z406 1995 aaKnown RBP16.89■□□□□ 0.3
ERCC3-205ENST00000460485 PDE8AO60658 829 aa16.89■□□□□ 0.29
ERCC3-205ENST00000460485 PHF14O94880 888 aa16.89■□□□□ 0.29
ERCC3-205ENST00000460485 ZFYP08048 801 aaPredicted RBP16.89■□□□□ 0.29
ERCC3-205ENST00000460485 KCNJ4P48050 445 aa16.89■□□□□ 0.29
ERCC3-205ENST00000460485 EIF5P55010 431 aaKnown RBP16.89■□□□□ 0.29
ERCC3-205ENST00000460485 CTSWP56202 376 aa16.89■□□□□ 0.29
ERCC3-205ENST00000460485 TAF7LQ5H9L4 462 aa16.89■□□□□ 0.29
ERCC3-205ENST00000460485 CCDC158Q5M9N0 1113 aa16.89■□□□□ 0.29
ERCC3-205ENST00000460485 ZNF512BQ96KM6 892 aaPredicted RBP16.89■□□□□ 0.29
ERCC3-205ENST00000460485 DBNDD2Q9BQY9 259 aa16.89■□□□□ 0.29
ERCC3-205ENST00000460485 IL25Q9H293 177 aa16.89■□□□□ 0.29
ERCC3-205ENST00000460485 ZSWIM6Q9HCJ5 1215 aa16.89■□□□□ 0.29
ERCC3-205ENST00000460485 LIMCH1Q9UPQ0 1083 aa16.89■□□□□ 0.29
ERCC3-205ENST00000460485 ZNF652Q9Y2D9 606 aa16.89■□□□□ 0.29
ERCC3-205ENST00000460485 ZBTB1Q9Y2K1 713 aa16.89■□□□□ 0.29
ERCC3-205ENST00000460485 CYP46A1Q9Y6A2 500 aa16.89■□□□□ 0.29
ERCC3-205ENST00000460485 U3KPZ7 1027 aaPredicted RBP16.89■□□□□ 0.29
ERCC3-205ENST00000460485 ANKRD18BA2A2Z9 1011 aa16.88■□□□□ 0.29
ERCC3-205ENST00000460485 TRAK2O60296 914 aa16.88■□□□□ 0.29
ERCC3-205ENST00000460485 USPL1Q5W0Q7 1092 aa16.88■□□□□ 0.29
ERCC3-205ENST00000460485 ARHGAP27Q6ZUM4 889 aa16.88■□□□□ 0.29
ERCC3-205ENST00000460485 ZNF34Q8IZ26 560 aa16.88■□□□□ 0.29
ERCC3-205ENST00000460485 SLC4A9Q96Q91 983 aa16.88■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 13.5 ms