RNA–Protein interactions for RNA: ENST00000460110.5

NUDCD3-203, Transcript of NudC domain containing 3, humanhuman

TSL 1 (best)

Gene NUDCD3, Length 3,641 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUDCD3-203ENST00000460110 LRP2BPQ9P2M1 347 aa11.17□□□□□ -0.62
NUDCD3-203ENST00000460110 BCL9O00512 1426 aa11.17□□□□□ -0.62
NUDCD3-203ENST00000460110 SLC4A8Q2Y0W8 1093 aa11.16□□□□□ -0.62
NUDCD3-203ENST00000460110 KBTBD3Q8NAB2 608 aa11.16□□□□□ -0.62
NUDCD3-203ENST00000460110 LINC00116Q8NCU8 138 aa11.16□□□□□ -0.62
NUDCD3-203ENST00000460110 PHRF1Q9P1Y6 1649 aaKnown RBP11.16□□□□□ -0.62
NUDCD3-203ENST00000460110 SLC27A2O14975 620 aa11.16□□□□□ -0.62
NUDCD3-203ENST00000460110 PSMA5P28066 241 aa11.16□□□□□ -0.62
NUDCD3-203ENST00000460110 ERFEQ4G0M1 354 aa11.16□□□□□ -0.62
NUDCD3-203ENST00000460110 LIMCH1Q9UPQ0 1083 aa11.16□□□□□ -0.62
NUDCD3-203ENST00000460110 MCM2P49736 904 aa11.16□□□□□ -0.62
NUDCD3-203ENST00000460110 FAM196AQ6ZSG2 479 aa11.16□□□□□ -0.62
NUDCD3-203ENST00000460110 CCT2P78371 535 aaKnown RBP11.15□□□□□ -0.62
NUDCD3-203ENST00000460110 GJD4Q96KN9 370 aaPredicted RBP11.15□□□□□ -0.62
NUDCD3-203ENST00000460110 HAUS7Q99871 368 aa11.15□□□□□ -0.62
NUDCD3-203ENST00000460110 RAI14Q9P0K7 980 aa11.15□□□□□ -0.62
NUDCD3-203ENST00000460110 JCADQ9P266 1359 aa11.15□□□□□ -0.62
NUDCD3-203ENST00000460110 BCAMP50895 628 aa11.15□□□□□ -0.62
NUDCD3-203ENST00000460110 ANAPC15P60006 121 aa11.15□□□□□ -0.62
NUDCD3-203ENST00000460110 CAVIN1Q6NZI2 390 aaKnown RBP11.15□□□□□ -0.62
NUDCD3-203ENST00000460110 ROBO1Q9Y6N7 1651 aa11.15□□□□□ -0.62
NUDCD3-203ENST00000460110 FIBPO43427 364 aa11.15□□□□□ -0.63
NUDCD3-203ENST00000460110 BAG4O95429 457 aaKnown RBP11.15□□□□□ -0.63
NUDCD3-203ENST00000460110 COL9A3Q14050 684 aaPredicted RBP11.15□□□□□ -0.63
NUDCD3-203ENST00000460110 VPS72Q15906 364 aa11.15□□□□□ -0.63
NUDCD3-203ENST00000460110 MIGA1Q8NAN2 632 aa11.15□□□□□ -0.63
NUDCD3-203ENST00000460110 LMO7Q8WWI1 1683 aa11.14□□□□□ -0.63
NUDCD3-203ENST00000460110 SLC5A1P13866 664 aa11.14□□□□□ -0.63
NUDCD3-203ENST00000460110 BRF1Q92994 677 aa11.14□□□□□ -0.63
NUDCD3-203ENST00000460110 FAM208AQ9UK61 1670 aaKnown RBP11.14□□□□□ -0.63
NUDCD3-203ENST00000460110 WTIPA6NIX2 430 aaPredicted RBP11.14□□□□□ -0.63
NUDCD3-203ENST00000460110 LRRFIP1Q32MZ4 808 aaKnown RBP11.14□□□□□ -0.63
NUDCD3-203ENST00000460110 RALYLQ86SE5 291 aaKnown RBP11.14□□□□□ -0.63
NUDCD3-203ENST00000460110 ANKRD18AQ8IVF6 992 aa11.14□□□□□ -0.63
NUDCD3-203ENST00000460110 FBXW7Q969H0 707 aa11.14□□□□□ -0.63
NUDCD3-203ENST00000460110 NEK1Q96PY6 1258 aa11.14□□□□□ -0.63
NUDCD3-203ENST00000460110 DDX24Q9GZR7 859 aaKnown RBP eCLIP11.14□□□□□ -0.63
NUDCD3-203ENST00000460110 CIZ1Q9ULV3 898 aaPredicted RBP11.14□□□□□ -0.63
NUDCD3-203ENST00000460110 RNF113AO15541 343 aaKnown RBP11.14□□□□□ -0.63
NUDCD3-203ENST00000460110 RAB3GAP1Q15042 981 aa11.14□□□□□ -0.63
NUDCD3-203ENST00000460110 AIDAQ96BJ3 306 aa11.14□□□□□ -0.63
NUDCD3-203ENST00000460110 NLRP3Q96P20 1036 aa11.14□□□□□ -0.63
NUDCD3-203ENST00000460110 TFCP2L1Q9NZI6 479 aa11.14□□□□□ -0.63
NUDCD3-203ENST00000460110 LRRC37A3O60309 1634 aa11.14□□□□□ -0.63
NUDCD3-203ENST00000460110 A0A0G2JLW4 131 aa11.13□□□□□ -0.63
NUDCD3-203ENST00000460110 PDE8BO95263 885 aa11.13□□□□□ -0.63
NUDCD3-203ENST00000460110 LARGE1O95461 756 aa11.13□□□□□ -0.63
NUDCD3-203ENST00000460110 GYG1P46976 350 aa11.13□□□□□ -0.63
NUDCD3-203ENST00000460110 CEBPZQ03701 1054 aaKnown RBP11.13□□□□□ -0.63
NUDCD3-203ENST00000460110 TRIM28Q13263 835 aaKnown RBP11.13□□□□□ -0.63
NUDCD3-203ENST00000460110 TRAPPC3LQ5T215 181 aa11.13□□□□□ -0.63
NUDCD3-203ENST00000460110 TBC1D9BQ66K14 1250 aa11.13□□□□□ -0.63
NUDCD3-203ENST00000460110 CCDC102BQ68D86 513 aa11.13□□□□□ -0.63
NUDCD3-203ENST00000460110 FAM184AQ8NB25 1140 aa11.13□□□□□ -0.63
NUDCD3-203ENST00000460110 CWC22Q9HCG8 908 aaKnown RBP11.13□□□□□ -0.63
NUDCD3-203ENST00000460110 ANKIB1Q9P2G1 1089 aa11.13□□□□□ -0.63
NUDCD3-203ENST00000460110 WWC3Q9ULE0 1092 aa11.13□□□□□ -0.63
NUDCD3-203ENST00000460110 ERVV-1B6SEH8 477 aa11.13□□□□□ -0.63
NUDCD3-203ENST00000460110 CAMTA2O94983 1202 aa11.13□□□□□ -0.63
NUDCD3-203ENST00000460110 RUFY3Q7L099 469 aa11.13□□□□□ -0.63
NUDCD3-203ENST00000460110 CDC5LQ99459 802 aaKnown RBP11.13□□□□□ -0.63
NUDCD3-203ENST00000460110 ZNF219Q9P2Y4 722 aaPredicted RBP11.13□□□□□ -0.63
NUDCD3-203ENST00000460110 BRPF3Q9ULD4 1205 aa11.13□□□□□ -0.63
NUDCD3-203ENST00000460110 GOLGB1Q14789 3259 aaKnown RBP11.13□□□□□ -0.63
NUDCD3-203ENST00000460110 GOLGA6L3A6NEY3 463 aa11.13□□□□□ -0.63
NUDCD3-203ENST00000460110 H3BQV1 296 aa11.13□□□□□ -0.63
NUDCD3-203ENST00000460110 GUCY1B3Q02153 619 aa11.13□□□□□ -0.63
NUDCD3-203ENST00000460110 IFFO2Q5TF58 517 aa11.13□□□□□ -0.63
NUDCD3-203ENST00000460110 LARP1BQ659C4 914 aaKnown RBP11.13□□□□□ -0.63
NUDCD3-203ENST00000460110 BARGINQ6ZT62 677 aa11.13□□□□□ -0.63
NUDCD3-203ENST00000460110 ZSCAN21Q9Y5A6 473 aaPredicted RBP11.13□□□□□ -0.63
NUDCD3-203ENST00000460110 GJB2P29033 226 aa11.12□□□□□ -0.63
NUDCD3-203ENST00000460110 PARP10Q53GL7 1025 aa11.12□□□□□ -0.63
NUDCD3-203ENST00000460110 MAGEB6Q8N7X4 407 aa11.12□□□□□ -0.63
NUDCD3-203ENST00000460110 MAP4K1Q92918 833 aa11.12□□□□□ -0.63
NUDCD3-203ENST00000460110 OSBP2Q969R2 916 aa11.12□□□□□ -0.63
NUDCD3-203ENST00000460110 PLCB2Q00722 1185 aa11.12□□□□□ -0.63
NUDCD3-203ENST00000460110 TRDNQ13061 729 aa11.12□□□□□ -0.63
NUDCD3-203ENST00000460110 TPTE2Q6XPS3 522 aa11.12□□□□□ -0.63
NUDCD3-203ENST00000460110 Q6ZUG5 572 aa11.12□□□□□ -0.63
NUDCD3-203ENST00000460110 TRPC5Q9UL62 973 aaPredicted RBP11.12□□□□□ -0.63
NUDCD3-203ENST00000460110 U3KPZ7 1027 aaPredicted RBP11.12□□□□□ -0.63
NUDCD3-203ENST00000460110 XIRP1Q702N8 1843 aaKnown RBP11.12□□□□□ -0.63
NUDCD3-203ENST00000460110 COL18A1P39060 1754 aa11.12□□□□□ -0.63
NUDCD3-203ENST00000460110 MCAMP43121 646 aa11.11□□□□□ -0.63
NUDCD3-203ENST00000460110 FAM173BQ6P4H8 233 aa11.11□□□□□ -0.63
NUDCD3-203ENST00000460110 ZNF34Q8IZ26 560 aa11.11□□□□□ -0.63
NUDCD3-203ENST00000460110 COL15A1P39059 1388 aa11.11□□□□□ -0.63
NUDCD3-203ENST00000460110 MINDY4BA8MYZ0 360 aa11.11□□□□□ -0.63
NUDCD3-203ENST00000460110 CYP21A2P08686 494 aa11.11□□□□□ -0.63
NUDCD3-203ENST00000460110 CHRNDQ07001 517 aa11.11□□□□□ -0.63
NUDCD3-203ENST00000460110 PUM3Q15397 648 aaKnown RBP11.11□□□□□ -0.63
NUDCD3-203ENST00000460110 CCDC144CPQ8IYA2 1237 aa11.11□□□□□ -0.63
NUDCD3-203ENST00000460110 RBM27Q9P2N5 1060 aaKnown RBP11.11□□□□□ -0.63
NUDCD3-203ENST00000460110 MTMR7Q9Y216 660 aa11.11□□□□□ -0.63
NUDCD3-203ENST00000460110 RIPOR2Q9Y4F9 1068 aa11.11□□□□□ -0.63
NUDCD3-203ENST00000460110 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP11.11□□□□□ -0.63
NUDCD3-203ENST00000460110 M0R2C6 588 aa11.11□□□□□ -0.63
NUDCD3-203ENST00000460110 NECTIN1Q15223 517 aa11.11□□□□□ -0.63
NUDCD3-203ENST00000460110 C3orf67Q6ZVT6 689 aa11.11□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 17.4 ms