RNA–Protein interactions for RNA: ENST00000458649.6

AMBRA1-202, Transcript of autophagy and beclin 1 regulator 1, humanhuman

TSL 2 BASIC

Gene AMBRA1, Length 5,351 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AMBRA1-202ENST00000458649 TSPY3P0CV98 308 aa12.36□□□□□ -0.43
AMBRA1-202ENST00000458649 TSPY8P0CW00 308 aa12.36□□□□□ -0.43
AMBRA1-202ENST00000458649 C8orf76Q96K31 380 aa12.36□□□□□ -0.43
AMBRA1-202ENST00000458649 RBM27Q9P2N5 1060 aaKnown RBP12.36□□□□□ -0.43
AMBRA1-202ENST00000458649 BRPF1P55201 1214 aaPredicted RBP12.36□□□□□ -0.43
AMBRA1-202ENST00000458649 CEP85Q6P2H3 762 aa12.36□□□□□ -0.43
AMBRA1-202ENST00000458649 LMBR1LQ6UX01 489 aa12.36□□□□□ -0.43
AMBRA1-202ENST00000458649 PLA2R1Q13018 1463 aa12.36□□□□□ -0.43
AMBRA1-202ENST00000458649 HOXB7P09629 217 aa12.36□□□□□ -0.43
AMBRA1-202ENST00000458649 LTKP29376 864 aa12.36□□□□□ -0.43
AMBRA1-202ENST00000458649 GRM1Q13255 1194 aa12.36□□□□□ -0.43
AMBRA1-202ENST00000458649 ORAI2Q96SN7 254 aa12.36□□□□□ -0.43
AMBRA1-202ENST00000458649 CHL1O00533 1208 aa12.36□□□□□ -0.43
AMBRA1-202ENST00000458649 DYNC1I1O14576 645 aa12.36□□□□□ -0.43
AMBRA1-202ENST00000458649 IBSPP21815 317 aaPredicted RBP12.36□□□□□ -0.43
AMBRA1-202ENST00000458649 TMEM67Q5HYA8 995 aa12.36□□□□□ -0.43
AMBRA1-202ENST00000458649 TMCO3Q6UWJ1 677 aa12.36□□□□□ -0.43
AMBRA1-202ENST00000458649 ERLIN2O94905 339 aa12.35□□□□□ -0.43
AMBRA1-202ENST00000458649 CCDC148Q8NFR7 591 aa12.35□□□□□ -0.43
AMBRA1-202ENST00000458649 ZBTB7BO15156 539 aaPredicted RBP12.35□□□□□ -0.43
AMBRA1-202ENST00000458649 DDX11Q96FC9 970 aa12.35□□□□□ -0.43
AMBRA1-202ENST00000458649 SH3TC1Q8TE82 1336 aa12.35□□□□□ -0.43
AMBRA1-202ENST00000458649 NPHP4O75161 1426 aaPredicted RBP12.35□□□□□ -0.43
AMBRA1-202ENST00000458649 ERVK-7P63135 1459 aa12.35□□□□□ -0.43
AMBRA1-202ENST00000458649 ERCC6L2Q5T890 1561 aa12.35□□□□□ -0.43
AMBRA1-202ENST00000458649 AMPD3Q01432 767 aa12.35□□□□□ -0.43
AMBRA1-202ENST00000458649 CETN1Q12798 172 aa12.35□□□□□ -0.43
AMBRA1-202ENST00000458649 ERMNQ8TAM6 284 aa12.35□□□□□ -0.43
AMBRA1-202ENST00000458649 DRC1Q96MC2 740 aa12.35□□□□□ -0.43
AMBRA1-202ENST00000458649 TCP11L1Q9NUJ3 509 aa12.35□□□□□ -0.43
AMBRA1-202ENST00000458649 UGGT1Q9NYU2 1555 aa12.35□□□□□ -0.43
AMBRA1-202ENST00000458649 GOLGA6L10A6NI86 522 aa12.34□□□□□ -0.43
AMBRA1-202ENST00000458649 TNNT1P13805 278 aa12.34□□□□□ -0.43
AMBRA1-202ENST00000458649 SSR1P43307 286 aaKnown RBP12.34□□□□□ -0.43
AMBRA1-202ENST00000458649 SMTNL1A8MU46 457 aa12.34□□□□□ -0.43
AMBRA1-202ENST00000458649 ALDH1B1P30837 517 aa12.34□□□□□ -0.43
AMBRA1-202ENST00000458649 UBXN4Q92575 508 aa12.34□□□□□ -0.43
AMBRA1-202ENST00000458649 CALML4Q96GE6 196 aa12.34□□□□□ -0.43
AMBRA1-202ENST00000458649 ADCY10Q96PN6 1610 aa12.34□□□□□ -0.43
AMBRA1-202ENST00000458649 CDC42BPAQ5VT25 1732 aa12.34□□□□□ -0.43
AMBRA1-202ENST00000458649 TTC6Q86TZ1 520 aa12.34□□□□□ -0.43
AMBRA1-202ENST00000458649 JARID2Q92833 1246 aaPredicted RBP12.34□□□□□ -0.43
AMBRA1-202ENST00000458649 DDX21Q9NR30 783 aaKnown RBP eCLIP12.34□□□□□ -0.43
AMBRA1-202ENST00000458649 LDHBP07195 334 aaKnown RBP12.34□□□□□ -0.43
AMBRA1-202ENST00000458649 SNRKQ9NRH2 765 aa12.34□□□□□ -0.43
AMBRA1-202ENST00000458649 SLTMQ9NWH9 1034 aaKnown RBP eCLIP12.34□□□□□ -0.437e-8■□□□□ 8.2
AMBRA1-202ENST00000458649 NBPF7P0C2Y1 421 aaPredicted RBP12.33□□□□□ -0.43
AMBRA1-202ENST00000458649 IARSP41252 1262 aaKnown RBP12.33□□□□□ -0.43
AMBRA1-202ENST00000458649 SPC24Q8NBT2 197 aa12.33□□□□□ -0.43
AMBRA1-202ENST00000458649 TNPO1Q92973 898 aaKnown RBP12.33□□□□□ -0.43
AMBRA1-202ENST00000458649 STX8Q9UNK0 236 aa12.33□□□□□ -0.43
AMBRA1-202ENST00000458649 SSFA2P28290 1259 aa12.33□□□□□ -0.44
AMBRA1-202ENST00000458649 RXRBP28702 533 aa12.33□□□□□ -0.44
AMBRA1-202ENST00000458649 FERMT3Q86UX7 667 aa12.33□□□□□ -0.44
AMBRA1-202ENST00000458649 DENND2AQ9ULE3 1009 aa12.33□□□□□ -0.44
AMBRA1-202ENST00000458649 F8W031 263 aaPredicted RBP12.33□□□□□ -0.44
AMBRA1-202ENST00000458649 SHTN1A0MZ66 631 aa12.33□□□□□ -0.44
AMBRA1-202ENST00000458649 BMP15O95972 392 aa12.33□□□□□ -0.44
AMBRA1-202ENST00000458649 VTI1AQ96AJ9 217 aa12.33□□□□□ -0.44
AMBRA1-202ENST00000458649 SCAND2PQ9GZW5 306 aaPredicted RBP12.33□□□□□ -0.44
AMBRA1-202ENST00000458649 PLCD3Q8N3E9 789 aa12.32□□□□□ -0.44
AMBRA1-202ENST00000458649 GTPBP4Q9BZE4 634 aaKnown RBP12.32□□□□□ -0.44
AMBRA1-202ENST00000458649 MCM5P33992 734 aa12.32□□□□□ -0.44
AMBRA1-202ENST00000458649 CTR9Q6PD62 1173 aa12.32□□□□□ -0.44
AMBRA1-202ENST00000458649 ZNF397Q8NF99 534 aaPredicted RBP12.32□□□□□ -0.44
AMBRA1-202ENST00000458649 CCDC102AQ96A19 550 aa12.32□□□□□ -0.44
AMBRA1-202ENST00000458649 GGA1Q9UJY5 639 aa12.32□□□□□ -0.44
AMBRA1-202ENST00000458649 SLC4A4Q9Y6R1 1079 aa12.32□□□□□ -0.44
AMBRA1-202ENST00000458649 CALM1P0DP23 149 aa12.32□□□□□ -0.44
AMBRA1-202ENST00000458649 CALM2P0DP24 149 aa12.32□□□□□ -0.44
AMBRA1-202ENST00000458649 CALM3P0DP25 149 aa12.32□□□□□ -0.44
AMBRA1-202ENST00000458649 GTF2F1P35269 517 aaKnown RBP eCLIP12.32□□□□□ -0.44
AMBRA1-202ENST00000458649 VPS36Q86VN1 386 aa12.32□□□□□ -0.44
AMBRA1-202ENST00000458649 MAGEB6P1A0A0J9YX57 407 aa12.32□□□□□ -0.44
AMBRA1-202ENST00000458649 ERVV-2B6SEH9 535 aa12.32□□□□□ -0.44
AMBRA1-202ENST00000458649 KIF2AO00139 706 aaPredicted RBP12.32□□□□□ -0.44
AMBRA1-202ENST00000458649 WTAPQ15007 396 aa12.32□□□□□ -0.44
AMBRA1-202ENST00000458649 TTLL5Q6EMB2 1281 aa12.32□□□□□ -0.44
AMBRA1-202ENST00000458649 ESYT1Q9BSJ8 1104 aa12.32□□□□□ -0.44
AMBRA1-202ENST00000458649 NUP62CLQ9H1M0 184 aa12.32□□□□□ -0.44
AMBRA1-202ENST00000458649 GJA3Q9Y6H8 435 aa12.32□□□□□ -0.44
AMBRA1-202ENST00000458649 CLCN1P35523 988 aa12.31□□□□□ -0.44
AMBRA1-202ENST00000458649 RBM26Q5T8P6 1007 aaKnown RBP12.31□□□□□ -0.44
AMBRA1-202ENST00000458649 USP37Q86T82 979 aa12.31□□□□□ -0.44
AMBRA1-202ENST00000458649 PLBD2Q8NHP8 589 aa12.31□□□□□ -0.44
AMBRA1-202ENST00000458649 SAMM50Q9Y512 469 aa12.31□□□□□ -0.44
AMBRA1-202ENST00000458649 NLRP1Q9C000 1473 aa12.31□□□□□ -0.44
AMBRA1-202ENST00000458649 G2E3Q7L622 706 aa12.31□□□□□ -0.44
AMBRA1-202ENST00000458649 LARGE2Q8N3Y3 721 aa12.31□□□□□ -0.44
AMBRA1-202ENST00000458649 PICK1Q9NRD5 415 aa12.31□□□□□ -0.44
AMBRA1-202ENST00000458649 TMEM94Q12767 1356 aa12.31□□□□□ -0.44
AMBRA1-202ENST00000458649 ARAP3Q8WWN8 1544 aa12.31□□□□□ -0.44
AMBRA1-202ENST00000458649 HECW2Q9P2P5 1572 aa12.31□□□□□ -0.44
AMBRA1-202ENST00000458649 PLEKHG1Q9ULL1 1385 aa12.31□□□□□ -0.44
AMBRA1-202ENST00000458649 GPR162Q16538 588 aa12.31□□□□□ -0.44
AMBRA1-202ENST00000458649 SEPT11Q9NVA2 429 aaKnown RBP12.31□□□□□ -0.44
AMBRA1-202ENST00000458649 MNAT1P51948 309 aa12.31□□□□□ -0.44
AMBRA1-202ENST00000458649 BRDTQ58F21 947 aaPredicted RBP12.31□□□□□ -0.44
AMBRA1-202ENST00000458649 DPY19L2Q6NUT2 758 aa12.31□□□□□ -0.44
AMBRA1-202ENST00000458649 ZNF790Q6PG37 636 aa12.31□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 34.8 ms