RNA–Protein interactions for RNA: ENST00000458640.5

DDX39B-214, Transcript of DExD-box helicase 39B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene DDX39B, Length 2,003 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39B-214ENST00000458640 PPP1R12AO14974 1030 aaPredicted RBP13.32□□□□□ -0.28
DDX39B-214ENST00000458640 RPS6KA5O75582 802 aa13.32□□□□□ -0.28
DDX39B-214ENST00000458640 GNAI3P08754 354 aa13.32□□□□□ -0.28
DDX39B-214ENST00000458640 FILIP1Q7Z7B0 1213 aa13.32□□□□□ -0.28
DDX39B-214ENST00000458640 DDX54Q8TDD1 881 aaKnown RBP13.32□□□□□ -0.28
DDX39B-214ENST00000458640 C16orf45Q96MC5 204 aaPredicted RBP13.32□□□□□ -0.28
DDX39B-214ENST00000458640 FUCA2Q9BTY2 467 aa13.32□□□□□ -0.28
DDX39B-214ENST00000458640 ADAMTS2O95450 1211 aa13.31□□□□□ -0.28
DDX39B-214ENST00000458640 SNRPA1P09661 255 aaKnown RBP13.31□□□□□ -0.28
DDX39B-214ENST00000458640 PNMA6AP0CW24 399 aaPredicted RBP13.31□□□□□ -0.28
DDX39B-214ENST00000458640 CUL4AQ13619 759 aa13.31□□□□□ -0.28
DDX39B-214ENST00000458640 TPD52L1Q16890 204 aaPredicted RBP13.31□□□□□ -0.28
DDX39B-214ENST00000458640 GPATCH11Q8N954 259 aa13.31□□□□□ -0.28
DDX39B-214ENST00000458640 USP26Q9BXU7 913 aa13.31□□□□□ -0.28
DDX39B-214ENST00000458640 C1orf115Q9H7X2 142 aa13.31□□□□□ -0.28
DDX39B-214ENST00000458640 ZNF215Q9UL58 517 aaPredicted RBP13.31□□□□□ -0.28
DDX39B-214ENST00000458640 SUFUQ9UMX1 484 aa13.31□□□□□ -0.28
DDX39B-214ENST00000458640 ATP10DQ9P241 1426 aa13.31□□□□□ -0.28
DDX39B-214ENST00000458640 TOGARAM1Q9Y4F4 1720 aa13.31□□□□□ -0.28
DDX39B-214ENST00000458640 HMMRO75330 724 aa13.3□□□□□ -0.28
DDX39B-214ENST00000458640 DDX58O95786 925 aaKnown RBP13.3□□□□□ -0.28
DDX39B-214ENST00000458640 HCLS1P14317 486 aaPredicted RBP13.3□□□□□ -0.28
DDX39B-214ENST00000458640 PLA2G4AP47712 749 aa13.3□□□□□ -0.28
DDX39B-214ENST00000458640 SLC39A6Q13433 755 aa13.3□□□□□ -0.28
DDX39B-214ENST00000458640 THRAP3Q9Y2W1 955 aaKnown RBP13.3□□□□□ -0.28
DDX39B-214ENST00000458640 TNS2Q63HR2 1409 aa13.3□□□□□ -0.28
DDX39B-214ENST00000458640 JCADQ9P266 1359 aa13.3□□□□□ -0.28
DDX39B-214ENST00000458640 ZRANB2O95218 330 aaKnown RBP eCLIP13.3□□□□□ -0.286e-7■■■■■ 28.2
DDX39B-214ENST00000458640 ZNF496Q96IT1 587 aaPredicted RBP13.3□□□□□ -0.28
DDX39B-214ENST00000458640 MEIS3Q99687 375 aa13.3□□□□□ -0.28
DDX39B-214ENST00000458640 PHAXQ9H814 394 aaKnown RBP13.3□□□□□ -0.28
DDX39B-214ENST00000458640 DDX21Q9NR30 783 aaKnown RBP eCLIP13.3□□□□□ -0.28
DDX39B-214ENST00000458640 GOLIM4O00461 696 aa13.29□□□□□ -0.28
DDX39B-214ENST00000458640 TRIM66O15016 1216 aa13.29□□□□□ -0.28
DDX39B-214ENST00000458640 CDC25BP30305 580 aa13.29□□□□□ -0.28
DDX39B-214ENST00000458640 UBE2HP62256 183 aa13.29□□□□□ -0.28
DDX39B-214ENST00000458640 PTPN14Q15678 1187 aa13.29□□□□□ -0.28
DDX39B-214ENST00000458640 MMS22LQ6ZRQ5 1243 aa13.29□□□□□ -0.28
DDX39B-214ENST00000458640 ANKRD44Q8N8A2 993 aa13.29□□□□□ -0.28
DDX39B-214ENST00000458640 WDR33Q9C0J8 1336 aaKnown RBP13.29□□□□□ -0.28
DDX39B-214ENST00000458640 GNAI2P04899 355 aa13.29□□□□□ -0.28
DDX39B-214ENST00000458640 ACTN2P35609 894 aa13.29□□□□□ -0.28
DDX39B-214ENST00000458640 SSR1P43307 286 aaKnown RBP13.29□□□□□ -0.28
DDX39B-214ENST00000458640 CASC1Q6TDU7 716 aa13.29□□□□□ -0.28
DDX39B-214ENST00000458640 TMCO3Q6UWJ1 677 aa13.29□□□□□ -0.28
DDX39B-214ENST00000458640 NYAP1Q6ZVC0 841 aa13.29□□□□□ -0.28
DDX39B-214ENST00000458640 ANKRD20A12PQ8NF67 263 aa13.29□□□□□ -0.28
DDX39B-214ENST00000458640 DNAAF4Q8WXU2 420 aa13.29□□□□□ -0.28
DDX39B-214ENST00000458640 DRC1Q96MC2 740 aa13.29□□□□□ -0.28
DDX39B-214ENST00000458640 SRCIN1Q9C0H9 1055 aa13.29□□□□□ -0.28
DDX39B-214ENST00000458640 MKRN1Q9UHC7 482 aaKnown RBP13.29□□□□□ -0.28
DDX39B-214ENST00000458640 GLI3P10071 1580 aa13.28□□□□□ -0.28
DDX39B-214ENST00000458640 SLIT2O94813 1529 aa13.28□□□□□ -0.28
DDX39B-214ENST00000458640 NUTM2BA6NNL0 878 aaPredicted RBP13.28□□□□□ -0.28
DDX39B-214ENST00000458640 NUTM2EB1AL46 878 aaPredicted RBP13.28□□□□□ -0.28
DDX39B-214ENST00000458640 MAP2K2P36507 400 aa13.28□□□□□ -0.28
DDX39B-214ENST00000458640 USP8P40818 1118 aa13.28□□□□□ -0.28
DDX39B-214ENST00000458640 NAA30Q147X3 362 aaPredicted RBP13.28□□□□□ -0.28
DDX39B-214ENST00000458640 NUTM2AQ8IVF1 878 aaPredicted RBP13.28□□□□□ -0.28
DDX39B-214ENST00000458640 ZGPATQ8N5A5 531 aaKnown RBP13.28□□□□□ -0.28
DDX39B-214ENST00000458640 NEK11Q8NG66 645 aa13.28□□□□□ -0.28
DDX39B-214ENST00000458640 PLCD4Q9BRC7 762 aa13.28□□□□□ -0.28
DDX39B-214ENST00000458640 LNPKQ9C0E8 428 aa13.28□□□□□ -0.28
DDX39B-214ENST00000458640 FAM107BQ9H098 131 aa13.28□□□□□ -0.28
DDX39B-214ENST00000458640 L2HGDHQ9H9P8 463 aa13.28□□□□□ -0.28
DDX39B-214ENST00000458640 TMOD3Q9NYL9 352 aa13.28□□□□□ -0.28
DDX39B-214ENST00000458640 CCDC192P0DO97 292 aa13.27□□□□□ -0.28
DDX39B-214ENST00000458640 GYS2P54840 703 aa13.27□□□□□ -0.28
DDX39B-214ENST00000458640 ELF2Q15723 593 aa13.27□□□□□ -0.28
DDX39B-214ENST00000458640 ZSCAN25Q6NSZ9 544 aa13.27□□□□□ -0.28
DDX39B-214ENST00000458640 CEP85Q6P2H3 762 aa13.27□□□□□ -0.28
DDX39B-214ENST00000458640 MPNDQ8N594 471 aa13.27□□□□□ -0.28
DDX39B-214ENST00000458640 TMX1Q9H3N1 280 aa13.27□□□□□ -0.28
DDX39B-214ENST00000458640 SPATA31A1Q5TZJ5 1347 aa13.27□□□□□ -0.29
DDX39B-214ENST00000458640 CCDC189A1A4V9 331 aa13.27□□□□□ -0.29
DDX39B-214ENST00000458640 PI4KAP2A4QPH2 592 aa13.27□□□□□ -0.29
DDX39B-214ENST00000458640 EXOC5O00471 708 aa13.27□□□□□ -0.29
DDX39B-214ENST00000458640 PTGS1P23219 599 aa13.27□□□□□ -0.29
DDX39B-214ENST00000458640 LEKR1Q6ZMV7 388 aa13.27□□□□□ -0.29
DDX39B-214ENST00000458640 USP48Q86UV5 1035 aa13.27□□□□□ -0.29
DDX39B-214ENST00000458640 PI4KAP1Q8N8J0 262 aa13.27□□□□□ -0.29
DDX39B-214ENST00000458640 FAM200AQ8TCP9 573 aa13.27□□□□□ -0.29
DDX39B-214ENST00000458640 ST7Q9NRC1 585 aa13.27□□□□□ -0.29
DDX39B-214ENST00000458640 KCPQ6ZWJ8 1503 aa13.27□□□□□ -0.29
DDX39B-214ENST00000458640 ITGB4P16144 1822 aa13.26□□□□□ -0.29
DDX39B-214ENST00000458640 UBTFL1P0CB47 393 aaPredicted RBP13.26□□□□□ -0.29
DDX39B-214ENST00000458640 ZRSR1Q15695 479 aaKnown RBP13.26□□□□□ -0.29
DDX39B-214ENST00000458640 TSGA10IPQ3SY00 556 aa13.26□□□□□ -0.29
DDX39B-214ENST00000458640 KSR2Q6VAB6 950 aa13.26□□□□□ -0.29
DDX39B-214ENST00000458640 SIRT2Q8IXJ6 389 aa13.26□□□□□ -0.29
DDX39B-214ENST00000458640 ADCY9O60503 1353 aa13.26□□□□□ -0.29
DDX39B-214ENST00000458640 PRAMEF22A3QJZ6 481 aa13.25□□□□□ -0.29
DDX39B-214ENST00000458640 CLSTN1O94985 981 aa13.25□□□□□ -0.29
DDX39B-214ENST00000458640 CAVIN2O95810 425 aa13.25□□□□□ -0.29
DDX39B-214ENST00000458640 CLCN6P51797 869 aa13.25□□□□□ -0.29
DDX39B-214ENST00000458640 DHX8Q14562 1220 aaKnown RBP13.25□□□□□ -0.29
DDX39B-214ENST00000458640 NBPF9Q3BBW0 867 aa13.25□□□□□ -0.29
DDX39B-214ENST00000458640 CCDC186Q7Z3E2 898 aa13.25□□□□□ -0.29
DDX39B-214ENST00000458640 PACS2Q86VP3 889 aa13.25□□□□□ -0.29
DDX39B-214ENST00000458640 SMARCE1Q969G3 411 aa13.25□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms