RNA–Protein interactions for RNA: ENST00000456385.5

CLIP4-208, Transcript of CAP-Gly domain containing linker protein family member 4, humanhuman

TSL 2

Gene CLIP4, Length 2,311 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP4-208ENST00000456385 SFPQP23246 707 aaKnown RBP eCLIP12.04□□□□□ -0.48
CLIP4-208ENST00000456385 ME1P48163 572 aa12.04□□□□□ -0.48
CLIP4-208ENST00000456385 FAM160A1Q05DH4 1040 aa12.04□□□□□ -0.48
CLIP4-208ENST00000456385 TMCO3Q6UWJ1 677 aa12.04□□□□□ -0.48
CLIP4-208ENST00000456385 FSIP1Q8NA03 581 aa12.04□□□□□ -0.48
CLIP4-208ENST00000456385 UBXN4Q92575 508 aa12.04□□□□□ -0.48
CLIP4-208ENST00000456385 SMARCE1Q969G3 411 aa12.04□□□□□ -0.48
CLIP4-208ENST00000456385 CHMP4AQ9BY43 222 aa12.04□□□□□ -0.48
CLIP4-208ENST00000456385 FLT4P35916 1363 aa12.04□□□□□ -0.48
CLIP4-208ENST00000456385 KCNQ3O43525 872 aa12.03□□□□□ -0.48
CLIP4-208ENST00000456385 SASH3O75995 380 aa12.03□□□□□ -0.48
CLIP4-208ENST00000456385 GUCY1B3Q02153 619 aa12.03□□□□□ -0.48
CLIP4-208ENST00000456385 SEC62Q99442 399 aaKnown RBP12.03□□□□□ -0.48
CLIP4-208ENST00000456385 SNRKQ9NRH2 765 aa12.03□□□□□ -0.48
CLIP4-208ENST00000456385 C9orf78Q9NZ63 289 aaPredicted RBP12.03□□□□□ -0.48
CLIP4-208ENST00000456385 MED23Q9ULK4 1368 aa12.03□□□□□ -0.48
CLIP4-208ENST00000456385 USP6P35125 1406 aa12.03□□□□□ -0.48
CLIP4-208ENST00000456385 A0A1B0GVL5 298 aa12.03□□□□□ -0.48
CLIP4-208ENST00000456385 PSDA5PKW4 1024 aaPredicted RBP12.03□□□□□ -0.48
CLIP4-208ENST00000456385 HIP1O00291 1037 aa12.03□□□□□ -0.48
CLIP4-208ENST00000456385 TAF5LO75529 589 aa12.03□□□□□ -0.48
CLIP4-208ENST00000456385 COL15A1P39059 1388 aa12.03□□□□□ -0.48
CLIP4-208ENST00000456385 MTX1Q13505 466 aa12.03□□□□□ -0.48
CLIP4-208ENST00000456385 CWF19L2Q2TBE0 894 aaKnown RBP12.03□□□□□ -0.48
CLIP4-208ENST00000456385 N4BP2Q86UW6 1770 aaPredicted RBP12.03□□□□□ -0.48
CLIP4-208ENST00000456385 LTV1Q96GA3 475 aaPredicted RBP12.03□□□□□ -0.48
CLIP4-208ENST00000456385 NEK1Q96PY6 1258 aa12.03□□□□□ -0.48
CLIP4-208ENST00000456385 SIL1Q9H173 461 aa12.03□□□□□ -0.48
CLIP4-208ENST00000456385 IMPACTQ9P2X3 320 aa12.03□□□□□ -0.48
CLIP4-208ENST00000456385 NDUFB9Q9Y6M9 179 aa12.03□□□□□ -0.48
CLIP4-208ENST00000456385 SBNO1A3KN83 1393 aa12.02□□□□□ -0.49
CLIP4-208ENST00000456385 BIN1O00499 593 aa12.02□□□□□ -0.49
CLIP4-208ENST00000456385 ETF1P62495 437 aaKnown RBP12.02□□□□□ -0.49
CLIP4-208ENST00000456385 KRBA2Q6ZNG9 492 aa12.02□□□□□ -0.49
CLIP4-208ENST00000456385 SDF4Q9BRK5 362 aa12.02□□□□□ -0.49
CLIP4-208ENST00000456385 NAT10Q9H0A0 1025 aaKnown RBP12.02□□□□□ -0.49
CLIP4-208ENST00000456385 ROBO2Q9HCK4 1378 aa12.02□□□□□ -0.49
CLIP4-208ENST00000456385 GYS2P54840 703 aa12.02□□□□□ -0.49
CLIP4-208ENST00000456385 PTPN21Q16825 1174 aa12.02□□□□□ -0.49
CLIP4-208ENST00000456385 TSGA10IPQ3SY00 556 aa12.02□□□□□ -0.49
CLIP4-208ENST00000456385 NUTM2GQ5VZR2 741 aa12.02□□□□□ -0.49
CLIP4-208ENST00000456385 CCDC129Q6ZRS4 1044 aa12.02□□□□□ -0.49
CLIP4-208ENST00000456385 USHBP1Q8N6Y0 703 aa12.02□□□□□ -0.49
CLIP4-208ENST00000456385 KLHDC4Q8TBB5 520 aa12.02□□□□□ -0.49
CLIP4-208ENST00000456385 URI1O94763 535 aaPredicted RBP12.01□□□□□ -0.49
CLIP4-208ENST00000456385 CTDNEP1O95476 244 aa12.01□□□□□ -0.49
CLIP4-208ENST00000456385 TEX35Q5T0J7 233 aa12.01□□□□□ -0.49
CLIP4-208ENST00000456385 TRIM65Q6PJ69 517 aa12.01□□□□□ -0.49
CLIP4-208ENST00000456385 ILDR1Q86SU0 546 aaPredicted RBP12.01□□□□□ -0.49
CLIP4-208ENST00000456385 ERC1Q8IUD2 1116 aa12.01□□□□□ -0.49
CLIP4-208ENST00000456385 FMR1NBQ8N0W7 255 aaPredicted RBP12.01□□□□□ -0.49
CLIP4-208ENST00000456385 CCDC150Q8NCX0 1101 aa12.01□□□□□ -0.49
CLIP4-208ENST00000456385 CCDC34Q96HJ3 373 aa12.01□□□□□ -0.49
CLIP4-208ENST00000456385 CARD6Q9BX69 1037 aa12.01□□□□□ -0.49
CLIP4-208ENST00000456385 ARGLU1Q9NWB6 273 aaPredicted RBP12.01□□□□□ -0.49
CLIP4-208ENST00000456385 HMG20BQ9P0W2 317 aa12.01□□□□□ -0.49
CLIP4-208ENST00000456385 LRRC37A3O60309 1634 aa12.01□□□□□ -0.49
CLIP4-208ENST00000456385 NRXN3Q9Y4C0 1643 aa12.01□□□□□ -0.49
CLIP4-208ENST00000456385 PLEKHG3A1L390 1219 aa12□□□□□ -0.49
CLIP4-208ENST00000456385 TBC1D8O95759 1140 aa12□□□□□ -0.49
CLIP4-208ENST00000456385 NDUFA8P51970 172 aa12□□□□□ -0.49
CLIP4-208ENST00000456385 EIF4A1P60842 406 aaKnown RBP12□□□□□ -0.49
CLIP4-208ENST00000456385 CCT2P78371 535 aaKnown RBP12□□□□□ -0.49
CLIP4-208ENST00000456385 GOLGA8FQ08AF8 430 aa12□□□□□ -0.49
CLIP4-208ENST00000456385 GOLGA8DPQ0D2H9 430 aa12□□□□□ -0.49
CLIP4-208ENST00000456385 ISM2Q6H9L7 571 aa12□□□□□ -0.49
CLIP4-208ENST00000456385 FAM177A1Q8N128 213 aaPredicted RBP12□□□□□ -0.49
CLIP4-208ENST00000456385 NSUN7Q8NE18 718 aaKnown RBP12□□□□□ -0.49
CLIP4-208ENST00000456385 MNS1Q8NEH6 495 aa12□□□□□ -0.49
CLIP4-208ENST00000456385 SMARCC2Q8TAQ2 1214 aa12□□□□□ -0.49
CLIP4-208ENST00000456385 LGR6Q9HBX8 967 aa12□□□□□ -0.49
CLIP4-208ENST00000456385 NCOA5Q9HCD5 579 aaKnown RBP12□□□□□ -0.49
CLIP4-208ENST00000456385 PCDHA7Q9UN72 937 aa12□□□□□ -0.49
CLIP4-208ENST00000456385 MAP3K2Q9Y2U5 619 aa12□□□□□ -0.49
CLIP4-208ENST00000456385 TADA3O75528 432 aa12□□□□□ -0.49
CLIP4-208ENST00000456385 CYP21A2P08686 494 aa12□□□□□ -0.49
CLIP4-208ENST00000456385 LMOD1P29536 600 aaPredicted RBP12□□□□□ -0.49
CLIP4-208ENST00000456385 OAS2P29728 719 aaKnown RBP12□□□□□ -0.49
CLIP4-208ENST00000456385 TPM4P67936 248 aa12□□□□□ -0.49
CLIP4-208ENST00000456385 CERS3Q8IU89 383 aa12□□□□□ -0.49
CLIP4-208ENST00000456385 ZBTB9Q96C00 473 aa12□□□□□ -0.49
CLIP4-208ENST00000456385 LCMT1Q9UIC8 334 aa12□□□□□ -0.49
CLIP4-208ENST00000456385 CACNA1FO60840 1977 aa12□□□□□ -0.49
CLIP4-208ENST00000456385 PTPDC1A2A3K4 754 aa11.99□□□□□ -0.49
CLIP4-208ENST00000456385 TRIM66O15016 1216 aa11.99□□□□□ -0.49
CLIP4-208ENST00000456385 ATP1A3P13637 1013 aa11.99□□□□□ -0.49
CLIP4-208ENST00000456385 USPL1Q5W0Q7 1092 aa11.99□□□□□ -0.49
CLIP4-208ENST00000456385 KAZALD1Q96I82 304 aa11.99□□□□□ -0.49
CLIP4-208ENST00000456385 UBXN6Q9BZV1 441 aa11.99□□□□□ -0.49
CLIP4-208ENST00000456385 KIAA1468Q9P260 1216 aa11.99□□□□□ -0.49
CLIP4-208ENST00000456385 NALCNQ8IZF0 1738 aa11.99□□□□□ -0.49
CLIP4-208ENST00000456385 APOBRQ0VD83 1088 aa11.99□□□□□ -0.49
CLIP4-208ENST00000456385 G3BP1Q13283 466 aaKnown RBP eCLIP11.99□□□□□ -0.49
CLIP4-208ENST00000456385 PROSER3Q2NL68 480 aa11.99□□□□□ -0.49
CLIP4-208ENST00000456385 TXLNBQ8N3L3 684 aa11.99□□□□□ -0.49
CLIP4-208ENST00000456385 SUCLG2Q96I99 432 aa11.99□□□□□ -0.49
CLIP4-208ENST00000456385 TMX1Q9H3N1 280 aa11.99□□□□□ -0.49
CLIP4-208ENST00000456385 BICC1Q9H694 974 aaKnown RBP11.99□□□□□ -0.49
CLIP4-208ENST00000456385 PARP3Q9Y6F1 533 aa11.99□□□□□ -0.49
CLIP4-208ENST00000456385 NEDD4P46934 1319 aa11.98□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 76.8 ms