RNA–Protein interactions for RNA: ENST00000454244.4

LMCD1-205, Transcript of LIM and cysteine rich domains 1, humanhuman

TSL 2 BASIC

Gene LMCD1, Length 1,113 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMCD1-205ENST00000454244 LTBP1Q14766 1721 aa13.71□□□□□ -0.21
LMCD1-205ENST00000454244 ECE2O60344 883 aa13.71□□□□□ -0.21
LMCD1-205ENST00000454244 BEND3Q5T5X7 828 aa13.71□□□□□ -0.21
LMCD1-205ENST00000454244 JMYQ8N9B5 988 aa13.71□□□□□ -0.21
LMCD1-205ENST00000454244 PLA2G12BQ9BX93 195 aa13.71□□□□□ -0.21
LMCD1-205ENST00000454244 ADARB2Q9NS39 739 aaKnown RBP13.71□□□□□ -0.21
LMCD1-205ENST00000454244 RTL9Q8NET4 1388 aa13.71□□□□□ -0.22
LMCD1-205ENST00000454244 E9PSI1 815 aa13.7□□□□□ -0.22
LMCD1-205ENST00000454244 PSMD14O00487 310 aa13.7□□□□□ -0.22
LMCD1-205ENST00000454244 BSDC1Q9NW68 430 aaPredicted RBP13.7□□□□□ -0.22
LMCD1-205ENST00000454244 MKRN1Q9UHC7 482 aaKnown RBP13.7□□□□□ -0.22
LMCD1-205ENST00000454244 ZBTB12Q9Y330 459 aaPredicted RBP13.7□□□□□ -0.22
LMCD1-205ENST00000454244 XDHP47989 1333 aa13.69□□□□□ -0.22
LMCD1-205ENST00000454244 ADAMTSL1Q8N6G6 1762 aa13.69□□□□□ -0.22
LMCD1-205ENST00000454244 SHTN1A0MZ66 631 aa13.69□□□□□ -0.22
LMCD1-205ENST00000454244 TMEM88BA6NKF7 163 aa13.69□□□□□ -0.22
LMCD1-205ENST00000454244 G3V3G9 751 aa13.69□□□□□ -0.22
LMCD1-205ENST00000454244 CCER2I3L3R5 266 aa13.69□□□□□ -0.22
LMCD1-205ENST00000454244 ATP2B4P23634 1241 aa13.69□□□□□ -0.22
LMCD1-205ENST00000454244 IGHMBP2P38935 993 aaKnown RBP13.69□□□□□ -0.22
LMCD1-205ENST00000454244 FAM161AQ3B820 660 aa13.69□□□□□ -0.22
LMCD1-205ENST00000454244 DCAF8Q5TAQ9 597 aa13.69□□□□□ -0.22
LMCD1-205ENST00000454244 KCNQ5Q9NR82 932 aa13.69□□□□□ -0.22
LMCD1-205ENST00000454244 CNOT7Q9UIV1 285 aaKnown RBP13.69□□□□□ -0.22
LMCD1-205ENST00000454244 MINPP1Q9UNW1 487 aa13.69□□□□□ -0.22
LMCD1-205ENST00000454244 CSF1RP07333 972 aa13.68□□□□□ -0.22
LMCD1-205ENST00000454244 ITGA6P23229 1130 aa13.68□□□□□ -0.22
LMCD1-205ENST00000454244 SLFN5Q08AF3 891 aa13.68□□□□□ -0.22
LMCD1-205ENST00000454244 SLC4A10Q6U841 1118 aa13.68□□□□□ -0.22
LMCD1-205ENST00000454244 MICALL2Q8IY33 904 aa13.68□□□□□ -0.22
LMCD1-205ENST00000454244 TRPM4Q8TD43 1214 aa13.68□□□□□ -0.22
LMCD1-205ENST00000454244 CEP350Q5VT06 3117 aa13.67□□□□□ -0.22
LMCD1-205ENST00000454244 WTIPA6NIX2 430 aaPredicted RBP13.67□□□□□ -0.22
LMCD1-205ENST00000454244 H7C1D1 291 aa13.67□□□□□ -0.22
LMCD1-205ENST00000454244 HIRAP54198 1017 aaPredicted RBP13.67□□□□□ -0.22
LMCD1-205ENST00000454244 FMR1Q06787 632 aaKnown RBP eCLIP13.67□□□□□ -0.22
LMCD1-205ENST00000454244 MRPL50Q8N5N7 158 aaKnown RBP13.67□□□□□ -0.22
LMCD1-205ENST00000454244 DPF2Q92785 391 aa13.67□□□□□ -0.22
LMCD1-205ENST00000454244 CDCA7LQ96GN5 454 aa13.67□□□□□ -0.22
LMCD1-205ENST00000454244 GRM8O00222 908 aa13.66□□□□□ -0.22
LMCD1-205ENST00000454244 TRAF5O00463 557 aa13.66□□□□□ -0.22
LMCD1-205ENST00000454244 ALDH1L1O75891 902 aa13.66□□□□□ -0.22
LMCD1-205ENST00000454244 RPS12P25398 132 aaKnown RBP13.66□□□□□ -0.22
LMCD1-205ENST00000454244 MPHOSPH8Q99549 860 aa13.66□□□□□ -0.22
LMCD1-205ENST00000454244 CHMP3Q9Y3E7 222 aa13.66□□□□□ -0.22
LMCD1-205ENST00000454244 CNTNAP1P78357 1384 aa13.66□□□□□ -0.22
LMCD1-205ENST00000454244 ANKRD18BA2A2Z9 1011 aa13.65□□□□□ -0.22
LMCD1-205ENST00000454244 VIL1P09327 827 aaKnown RBP13.65□□□□□ -0.22
LMCD1-205ENST00000454244 CCT4P50991 539 aaKnown RBP13.65□□□□□ -0.22
LMCD1-205ENST00000454244 FOXO4P98177 505 aa13.65□□□□□ -0.22
LMCD1-205ENST00000454244 EPHA10Q5JZY3 1008 aa13.65□□□□□ -0.22
LMCD1-205ENST00000454244 SAMD7Q7Z3H4 446 aa13.65□□□□□ -0.22
LMCD1-205ENST00000454244 SSH1Q8WYL5 1049 aa13.65□□□□□ -0.22
LMCD1-205ENST00000454244 SRCIN1Q9C0H9 1055 aa13.65□□□□□ -0.22
LMCD1-205ENST00000454244 C9orf78Q9NZ63 289 aaPredicted RBP13.65□□□□□ -0.22
LMCD1-205ENST00000454244 IFIT5Q13325 482 aaKnown RBP13.64□□□□□ -0.23
LMCD1-205ENST00000454244 TBC1D10BQ4KMP7 808 aaPredicted RBP13.64□□□□□ -0.23
LMCD1-205ENST00000454244 RBM26Q5T8P6 1007 aaKnown RBP13.64□□□□□ -0.23
LMCD1-205ENST00000454244 LMBR1LQ6UX01 489 aa13.64□□□□□ -0.23
LMCD1-205ENST00000454244 ZC3H15Q8WU90 426 aaKnown RBP13.64□□□□□ -0.23
LMCD1-205ENST00000454244 GLIS2Q9BZE0 524 aaPredicted RBP13.64□□□□□ -0.23
LMCD1-205ENST00000454244 ANKRD2Q9GZV1 360 aa13.64□□□□□ -0.23
LMCD1-205ENST00000454244 PGAP2Q9UHJ9 254 aa13.64□□□□□ -0.23
LMCD1-205ENST00000454244 ABT1Q9ULW3 272 aaKnown RBP13.64□□□□□ -0.23
LMCD1-205ENST00000454244 LEMD3Q9Y2U8 911 aa13.64□□□□□ -0.23
LMCD1-205ENST00000454244 MED23Q9ULK4 1368 aa13.63□□□□□ -0.23
LMCD1-205ENST00000454244 EGFRP00533 1210 aa13.63□□□□□ -0.23
LMCD1-205ENST00000454244 HSPA1AP0DMV8 641 aaKnown RBP13.63□□□□□ -0.23
LMCD1-205ENST00000454244 HSPA1BP0DMV9 641 aaKnown RBP13.63□□□□□ -0.23
LMCD1-205ENST00000454244 CHRNDQ07001 517 aa13.63□□□□□ -0.23
LMCD1-205ENST00000454244 RSBN1LQ6PCB5 846 aaPredicted RBP13.63□□□□□ -0.23
LMCD1-205ENST00000454244 PODNQ7Z5L7 613 aa13.63□□□□□ -0.23
LMCD1-205ENST00000454244 CACNA1FO60840 1977 aa13.63□□□□□ -0.23
LMCD1-205ENST00000454244 ZNF804BA4D1E1 1349 aa13.63□□□□□ -0.23
LMCD1-205ENST00000454244 USP17L3A6NCW0 530 aa13.62□□□□□ -0.23
LMCD1-205ENST00000454244 USP17L4A6NCW7 530 aa13.62□□□□□ -0.23
LMCD1-205ENST00000454244 VEGFBP49765 207 aa13.62□□□□□ -0.23
LMCD1-205ENST00000454244 DEFB115Q30KQ5 88 aa13.62□□□□□ -0.23
LMCD1-205ENST00000454244 CST9Q5W186 159 aa13.62□□□□□ -0.23
LMCD1-205ENST00000454244 USP17L1Q7RTZ2 530 aa13.62□□□□□ -0.23
LMCD1-205ENST00000454244 TXNRD3Q86VQ6 643 aa13.62□□□□□ -0.23
LMCD1-205ENST00000454244 TRMT2AQ8IZ69 625 aaKnown RBP13.62□□□□□ -0.23
LMCD1-205ENST00000454244 SUCLG2Q96I99 432 aa13.62□□□□□ -0.23
LMCD1-205ENST00000454244 PTPRCP08575 1304 aa13.62□□□□□ -0.23
LMCD1-205ENST00000454244 RASSF10A6NK89 507 aa13.61□□□□□ -0.23
LMCD1-205ENST00000454244 KLRK1P26718 216 aa13.61□□□□□ -0.23
LMCD1-205ENST00000454244 KCNJ4P48050 445 aa13.61□□□□□ -0.23
LMCD1-205ENST00000454244 CCDC57Q2TAC2 916 aa13.61□□□□□ -0.23
LMCD1-205ENST00000454244 KIF4BQ2VIQ3 1234 aa13.61□□□□□ -0.23
LMCD1-205ENST00000454244 TAF7LQ5H9L4 462 aa13.61□□□□□ -0.23
LMCD1-205ENST00000454244 CDC37L1Q7L3B6 337 aa13.61□□□□□ -0.23
LMCD1-205ENST00000454244 AGBL3Q8NEM8 1001 aa13.61□□□□□ -0.23
LMCD1-205ENST00000454244 HELBQ8NG08 1087 aaPredicted RBP13.61□□□□□ -0.23
LMCD1-205ENST00000454244 ZNF594Q96JF6 807 aaPredicted RBP13.61□□□□□ -0.23
LMCD1-205ENST00000454244 COA1Q9GZY4 146 aa13.61□□□□□ -0.23
LMCD1-205ENST00000454244 SNAP23O00161 211 aa13.6□□□□□ -0.23
LMCD1-205ENST00000454244 TAF5LO75529 589 aa13.6□□□□□ -0.23
LMCD1-205ENST00000454244 CELF2O95319 508 aaKnown RBP13.6□□□□□ -0.23
LMCD1-205ENST00000454244 NBPF7P0C2Y1 421 aaPredicted RBP13.6□□□□□ -0.23
LMCD1-205ENST00000454244 ALDH1L2Q3SY69 923 aa13.6□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms