RNA–Protein interactions for RNA: ENST00000453744.6

UBE2D3-210, Transcript of ubiquitin conjugating enzyme E2 D3, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene UBE2D3, Length 3,990 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D3-210ENST00000453744 REREQ9P2R6 1566 aa16.11■□□□□ 0.17
UBE2D3-210ENST00000453744 POLA2Q14181 598 aa16.11■□□□□ 0.17
UBE2D3-210ENST00000453744 KSR2Q6VAB6 950 aa16.11■□□□□ 0.17
UBE2D3-210ENST00000453744 NEK11Q8NG66 645 aa16.11■□□□□ 0.17
UBE2D3-210ENST00000453744 PES1O00541 588 aaKnown RBP16.11■□□□□ 0.17
UBE2D3-210ENST00000453744 HOXC9P31274 260 aa16.11■□□□□ 0.17
UBE2D3-210ENST00000453744 UBASH3AP57075 661 aa16.1■□□□□ 0.17
UBE2D3-210ENST00000453744 ST3GAL1Q11201 340 aa16.1■□□□□ 0.17
UBE2D3-210ENST00000453744 NFXL1Q6ZNB6 911 aa16.1■□□□□ 0.17
UBE2D3-210ENST00000453744 CPLX3Q8WVH0 158 aa16.1■□□□□ 0.17
UBE2D3-210ENST00000453744 TRIM34Q9BYJ4 488 aa16.1■□□□□ 0.17
UBE2D3-210ENST00000453744 MYO3AQ8NEV4 1616 aa16.1■□□□□ 0.17
UBE2D3-210ENST00000453744 PRAMEF22A3QJZ6 481 aa16.1■□□□□ 0.17
UBE2D3-210ENST00000453744 LMAN1P49257 510 aa16.1■□□□□ 0.17
UBE2D3-210ENST00000453744 TOB2Q14106 344 aaPredicted RBP16.1■□□□□ 0.17
UBE2D3-210ENST00000453744 ORC3Q9UBD5 711 aaPredicted RBP16.1■□□□□ 0.17
UBE2D3-210ENST00000453744 VWDEQ8N2E2 1590 aa16.09■□□□□ 0.17
UBE2D3-210ENST00000453744 EIF4A1P60842 406 aaKnown RBP16.09■□□□□ 0.17
UBE2D3-210ENST00000453744 SLFNL1Q499Z3 407 aa16.09■□□□□ 0.17
UBE2D3-210ENST00000453744 TTC5Q8N0Z6 440 aa16.09■□□□□ 0.17
UBE2D3-210ENST00000453744 CCDC150Q8NCX0 1101 aa16.09■□□□□ 0.17
UBE2D3-210ENST00000453744 MRFAP1L1Q96HT8 127 aa16.09■□□□□ 0.17
UBE2D3-210ENST00000453744 CRB1P82279 1406 aa16.09■□□□□ 0.17
UBE2D3-210ENST00000453744 INO80Q9ULG1 1556 aaPredicted RBP16.09■□□□□ 0.17
UBE2D3-210ENST00000453744 MAP2P11137 1827 aaKnown RBP16.09■□□□□ 0.17
UBE2D3-210ENST00000453744 SEC31AO94979 1220 aaKnown RBP16.09■□□□□ 0.17
UBE2D3-210ENST00000453744 SCRN1Q12765 414 aa16.09■□□□□ 0.17
UBE2D3-210ENST00000453744 TFCP2Q12800 502 aa16.09■□□□□ 0.17
UBE2D3-210ENST00000453744 CEBPAP49715 358 aaPredicted RBP16.08■□□□□ 0.17
UBE2D3-210ENST00000453744 TRDNQ13061 729 aa16.08■□□□□ 0.17
UBE2D3-210ENST00000453744 TRIM29Q14134 588 aa16.08■□□□□ 0.17
UBE2D3-210ENST00000453744 HSP90AB3PQ58FF7 597 aa16.08■□□□□ 0.17
UBE2D3-210ENST00000453744 DBNDD2Q9BQY9 259 aa16.08■□□□□ 0.17
UBE2D3-210ENST00000453744 ARHGAP31Q2M1Z3 1444 aa16.08■□□□□ 0.16
UBE2D3-210ENST00000453744 GOLGA8BA8MQT2 603 aa16.08■□□□□ 0.16
UBE2D3-210ENST00000453744 DPCR1Q3MIW9 517 aa16.08■□□□□ 0.16
UBE2D3-210ENST00000453744 MCMDC2Q4G0Z9 681 aa16.08■□□□□ 0.16
UBE2D3-210ENST00000453744 CPS1P31327 1500 aa16.07■□□□□ 0.16
UBE2D3-210ENST00000453744 NEXMIFQ5QGS0 1516 aa16.07■□□□□ 0.16
UBE2D3-210ENST00000453744 CCP110O43303 1012 aa16.07■□□□□ 0.16
UBE2D3-210ENST00000453744 KARSQ15046 597 aaKnown RBP16.07■□□□□ 0.16
UBE2D3-210ENST00000453744 EPC1Q9H2F5 836 aa16.07■□□□□ 0.16
UBE2D3-210ENST00000453744 USP32Q8NFA0 1604 aa16.07■□□□□ 0.16
UBE2D3-210ENST00000453744 SASH1O94885 1247 aa16.07■□□□□ 0.16
UBE2D3-210ENST00000453744 CASQ1P31415 396 aa16.07■□□□□ 0.16
UBE2D3-210ENST00000453744 EVCP57679 992 aa16.07■□□□□ 0.16
UBE2D3-210ENST00000453744 MCM6Q14566 821 aa16.07■□□□□ 0.16
UBE2D3-210ENST00000453744 CPLX2Q6PUV4 134 aaKnown RBP16.07■□□□□ 0.16
UBE2D3-210ENST00000453744 CCDC82Q8N4S0 544 aa16.07■□□□□ 0.16
UBE2D3-210ENST00000453744 NLRP2Q9NX02 1062 aa16.07■□□□□ 0.16
UBE2D3-210ENST00000453744 TAF5LO75529 589 aa16.07■□□□□ 0.16
UBE2D3-210ENST00000453744 RESTQ13127 1097 aa16.07■□□□□ 0.16
UBE2D3-210ENST00000453744 LINS1Q8NG48 757 aa16.07■□□□□ 0.16
UBE2D3-210ENST00000453744 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP16.07■□□□□ 0.16
UBE2D3-210ENST00000453744 ALDH1L1O75891 902 aa16.06■□□□□ 0.16
UBE2D3-210ENST00000453744 SLFN14P0C7P3 912 aa16.06■□□□□ 0.16
UBE2D3-210ENST00000453744 COPS6Q7L5N1 327 aa16.06■□□□□ 0.16
UBE2D3-210ENST00000453744 GOLGA6L1Q8N7Z2 621 aa16.06■□□□□ 0.16
UBE2D3-210ENST00000453744 GOLPH3LQ9H4A5 285 aa16.06■□□□□ 0.16
UBE2D3-210ENST00000453744 DEPDC5O75140 1603 aa16.06■□□□□ 0.16
UBE2D3-210ENST00000453744 SPTLC2O15270 562 aa16.06■□□□□ 0.16
UBE2D3-210ENST00000453744 ESCO1Q5FWF5 840 aa16.06■□□□□ 0.16
UBE2D3-210ENST00000453744 DHX32Q7L7V1 743 aaKnown RBP16.06■□□□□ 0.16
UBE2D3-210ENST00000453744 XAGE3Q8WTP9 111 aa16.06■□□□□ 0.16
UBE2D3-210ENST00000453744 A0A087WZG4 1122 aa16.06■□□□□ 0.16
UBE2D3-210ENST00000453744 RXRAP19793 462 aa16.06■□□□□ 0.16
UBE2D3-210ENST00000453744 KLHL10Q6JEL2 608 aa16.06■□□□□ 0.16
UBE2D3-210ENST00000453744 C10orf67Q8IYJ2 551 aa16.06■□□□□ 0.16
UBE2D3-210ENST00000453744 MORC2Q9Y6X9 1032 aaPredicted RBP16.06■□□□□ 0.16
UBE2D3-210ENST00000453744 MROH1Q8NDA8 1641 aa16.05■□□□□ 0.16
UBE2D3-210ENST00000453744 CYP21A2P08686 494 aa16.05■□□□□ 0.16
UBE2D3-210ENST00000453744 CLCN6P51797 869 aa16.05■□□□□ 0.16
UBE2D3-210ENST00000453744 AK7Q96M32 723 aa16.05■□□□□ 0.16
UBE2D3-210ENST00000453744 SBNO1A3KN83 1393 aa16.05■□□□□ 0.16
UBE2D3-210ENST00000453744 KLF18A0A0U1RQI7 1052 aa16.05■□□□□ 0.16
UBE2D3-210ENST00000453744 PPP1R13BQ96KQ4 1090 aa16.05■□□□□ 0.16
UBE2D3-210ENST00000453744 NDUFA8P51970 172 aa16.05■□□□□ 0.16
UBE2D3-210ENST00000453744 TIMM10P62072 90 aa16.05■□□□□ 0.16
UBE2D3-210ENST00000453744 FANCCQ00597 558 aa16.05■□□□□ 0.16
UBE2D3-210ENST00000453744 PDE4CQ08493 712 aa16.05■□□□□ 0.16
UBE2D3-210ENST00000453744 PCDHA7Q9UN72 937 aa16.05■□□□□ 0.16
UBE2D3-210ENST00000453744 ARHGEF28Q8N1W1 1705 aaKnown RBP16.05■□□□□ 0.16
UBE2D3-210ENST00000453744 CBFA2T2O43439 604 aa16.04■□□□□ 0.16
UBE2D3-210ENST00000453744 DHX16O60231 1041 aaKnown RBP16.04■□□□□ 0.16
UBE2D3-210ENST00000453744 HSP90B2PQ58FF3 399 aa16.04■□□□□ 0.16
UBE2D3-210ENST00000453744 CCDC12Q8WUD4 166 aaPredicted RBP16.04■□□□□ 0.16
UBE2D3-210ENST00000453744 CCDC102AQ96A19 550 aa16.04■□□□□ 0.16
UBE2D3-210ENST00000453744 RNF216Q9NWF9 866 aaPredicted RBP16.04■□□□□ 0.16
UBE2D3-210ENST00000453744 ZSCAN12O43309 604 aa16.04■□□□□ 0.16
UBE2D3-210ENST00000453744 SYKP43405 635 aa16.04■□□□□ 0.16
UBE2D3-210ENST00000453744 LEKR1Q6ZMV7 388 aa16.04■□□□□ 0.16
UBE2D3-210ENST00000453744 KRBA2Q6ZNG9 492 aa16.04■□□□□ 0.16
UBE2D3-210ENST00000453744 ZCCHC17Q9NP64 241 aaKnown RBP16.04■□□□□ 0.16
UBE2D3-210ENST00000453744 GJB4Q9NTQ9 266 aa16.04■□□□□ 0.16
UBE2D3-210ENST00000453744 ARHGEF10O15013 1369 aa16.04■□□□□ 0.16
UBE2D3-210ENST00000453744 PPLO60437 1756 aa16.04■□□□□ 0.16
UBE2D3-210ENST00000453744 IFIT1P09914 478 aaKnown RBP16.04■□□□□ 0.16
UBE2D3-210ENST00000453744 IQCB1Q15051 598 aa16.04■□□□□ 0.16
UBE2D3-210ENST00000453744 SYCP1Q15431 976 aa16.04■□□□□ 0.16
UBE2D3-210ENST00000453744 NBPF6Q5VWK0 638 aa16.04■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms