RNA–Protein interactions for RNA: ENST00000453260.6

TNFRSF25-207, Transcript of TNF receptor superfamily member 25, humanhuman

TSL 2

Gene TNFRSF25, Length 984 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF25-207ENST00000453260 ECE2O60344 883 aa23.59■■□□□ 1.37
TNFRSF25-207ENST00000453260 SLC4A2P04920 1241 aa23.59■■□□□ 1.37
TNFRSF25-207ENST00000453260 RPS12P25398 132 aaKnown RBP23.59■■□□□ 1.37
TNFRSF25-207ENST00000453260 CTCFP49711 727 aaPredicted RBP23.59■■□□□ 1.37
TNFRSF25-207ENST00000453260 FMR1Q06787 632 aaKnown RBP eCLIP23.59■■□□□ 1.37
TNFRSF25-207ENST00000453260 DOK7Q18PE1 504 aa23.59■■□□□ 1.37
TNFRSF25-207ENST00000453260 CST9Q5W186 159 aa23.59■■□□□ 1.37
TNFRSF25-207ENST00000453260 ANKRD18AQ8IVF6 992 aa23.59■■□□□ 1.37
TNFRSF25-207ENST00000453260 WBP1LQ9NX94 342 aa23.59■■□□□ 1.37
TNFRSF25-207ENST00000453260 GGA1Q9UJY5 639 aa23.59■■□□□ 1.37
TNFRSF25-207ENST00000453260 ZNF316A6NFI3 1004 aaPredicted RBP23.58■■□□□ 1.37
TNFRSF25-207ENST00000453260 UFL1O94874 794 aa23.58■■□□□ 1.37
TNFRSF25-207ENST00000453260 CDC37L1Q7L3B6 337 aa23.58■■□□□ 1.37
TNFRSF25-207ENST00000453260 CCDC85AQ96PX6 553 aaPredicted RBP23.58■■□□□ 1.37
TNFRSF25-207ENST00000453260 ZBTB12Q9Y330 459 aaPredicted RBP23.58■■□□□ 1.37
TNFRSF25-207ENST00000453260 HIRAP54198 1017 aaPredicted RBP23.57■■□□□ 1.36
TNFRSF25-207ENST00000453260 CDC5LQ99459 802 aaKnown RBP23.57■■□□□ 1.36
TNFRSF25-207ENST00000453260 PRDM10Q9NQV6 1147 aa23.57■■□□□ 1.36
TNFRSF25-207ENST00000453260 TLL2Q9Y6L7 1015 aa23.57■■□□□ 1.36
TNFRSF25-207ENST00000453260 CELF2O95319 508 aaKnown RBP23.56■■□□□ 1.36
TNFRSF25-207ENST00000453260 IGKV5-2P06315 115 aa23.56■■□□□ 1.36
TNFRSF25-207ENST00000453260 TRPM4Q8TD43 1214 aa23.56■■□□□ 1.36
TNFRSF25-207ENST00000453260 CAPNS2Q96L46 248 aa23.56■■□□□ 1.36
TNFRSF25-207ENST00000453260 GLIS2Q9BZE0 524 aaPredicted RBP23.56■■□□□ 1.36
TNFRSF25-207ENST00000453260 CACNA1FO60840 1977 aa23.55■■□□□ 1.36
TNFRSF25-207ENST00000453260 CTSWP56202 376 aa23.55■■□□□ 1.36
TNFRSF25-207ENST00000453260 XDHP47989 1333 aa23.55■■□□□ 1.36
TNFRSF25-207ENST00000453260 COL4A1P02462 1669 aa23.54■■□□□ 1.36
TNFRSF25-207ENST00000453260 WDR63Q8IWG1 891 aa23.54■■□□□ 1.36
TNFRSF25-207ENST00000453260 GPR101Q96P66 508 aaPredicted RBP23.54■■□□□ 1.36
TNFRSF25-207ENST00000453260 BEGAINQ9BUH8 593 aa23.54■■□□□ 1.36
TNFRSF25-207ENST00000453260 KCNQ5Q9NR82 932 aa23.54■■□□□ 1.36
TNFRSF25-207ENST00000453260 SHTN1A0MZ66 631 aa23.53■■□□□ 1.36
TNFRSF25-207ENST00000453260 NEURL1BA8MQ27 555 aa23.53■■□□□ 1.36
TNFRSF25-207ENST00000453260 CAPN15O75808 1086 aa23.53■■□□□ 1.36
TNFRSF25-207ENST00000453260 VIL1P09327 827 aaKnown RBP23.53■■□□□ 1.36
TNFRSF25-207ENST00000453260 ATP2B4P23634 1241 aa23.53■■□□□ 1.36
TNFRSF25-207ENST00000453260 GRM1Q13255 1194 aa23.53■■□□□ 1.36
TNFRSF25-207ENST00000453260 G2E3Q7L622 706 aa23.53■■□□□ 1.36
TNFRSF25-207ENST00000453260 SAMD7Q7Z3H4 446 aa23.53■■□□□ 1.36
TNFRSF25-207ENST00000453260 TTLL11Q8NHH1 800 aa23.53■■□□□ 1.36
TNFRSF25-207ENST00000453260 FLIIQ13045 1269 aa23.52■■□□□ 1.36
TNFRSF25-207ENST00000453260 CWF19L2Q2TBE0 894 aaKnown RBP23.52■■□□□ 1.36
TNFRSF25-207ENST00000453260 TBC1D10BQ4KMP7 808 aaPredicted RBP23.52■■□□□ 1.36
TNFRSF25-207ENST00000453260 CYP4F22Q6NT55 531 aa23.52■■□□□ 1.36
TNFRSF25-207ENST00000453260 SAPCD2Q86UD0 394 aa23.52■■□□□ 1.36
TNFRSF25-207ENST00000453260 ZNF408Q9H9D4 720 aa23.52■■□□□ 1.36
TNFRSF25-207ENST00000453260 SALL2Q9Y467 1007 aaPredicted RBP23.52■■□□□ 1.36
TNFRSF25-207ENST00000453260 MYH3P11055 1940 aa23.52■■□□□ 1.36
TNFRSF25-207ENST00000453260 FKBP5Q13451 457 aaPredicted RBP23.51■■□□□ 1.35
TNFRSF25-207ENST00000453260 RBM26Q5T8P6 1007 aaKnown RBP23.51■■□□□ 1.35
TNFRSF25-207ENST00000453260 USP48Q86UV5 1035 aa23.51■■□□□ 1.35
TNFRSF25-207ENST00000453260 DCPSQ96C86 337 aaKnown RBP23.51■■□□□ 1.35
TNFRSF25-207ENST00000453260 HHIPL1Q96JK4 782 aa23.51■■□□□ 1.35
TNFRSF25-207ENST00000453260 MYH16Q9H6N6 1097 aa23.51■■□□□ 1.35
TNFRSF25-207ENST00000453260 BSDC1Q9NW68 430 aaPredicted RBP23.51■■□□□ 1.35
TNFRSF25-207ENST00000453260 FANCIQ9NVI1 1328 aa23.51■■□□□ 1.35
TNFRSF25-207ENST00000453260 RTL9Q8NET4 1388 aa23.51■■□□□ 1.35
TNFRSF25-207ENST00000453260 H7C1W4 665 aa23.5■■□□□ 1.35
TNFRSF25-207ENST00000453260 MAP2K2P36507 400 aa23.5■■□□□ 1.35
TNFRSF25-207ENST00000453260 LBX1P52954 281 aa23.5■■□□□ 1.35
TNFRSF25-207ENST00000453260 UBE3BQ7Z3V4 1068 aa23.5■■□□□ 1.35
TNFRSF25-207ENST00000453260 POLR2AP24928 1970 aaKnown RBP23.5■■□□□ 1.35
TNFRSF25-207ENST00000453260 KRT26Q7Z3Y9 468 aa23.49■■□□□ 1.35
TNFRSF25-207ENST00000453260 DNAAF4Q8WXU2 420 aa23.49■■□□□ 1.35
TNFRSF25-207ENST00000453260 GREM2Q9H772 168 aa23.49■■□□□ 1.35
TNFRSF25-207ENST00000453260 VAMP4O75379 141 aa23.48■■□□□ 1.35
TNFRSF25-207ENST00000453260 IGHMBP2P38935 993 aaKnown RBP23.48■■□□□ 1.35
TNFRSF25-207ENST00000453260 GCKRQ14397 625 aa23.48■■□□□ 1.35
TNFRSF25-207ENST00000453260 PODNQ7Z5L7 613 aa23.48■■□□□ 1.35
TNFRSF25-207ENST00000453260 AGBL3Q8NEM8 1001 aa23.48■■□□□ 1.35
TNFRSF25-207ENST00000453260 MINPP1Q9UNW1 487 aa23.48■■□□□ 1.35
TNFRSF25-207ENST00000453260 SCN9AQ15858 1988 aa23.47■■□□□ 1.35
TNFRSF25-207ENST00000453260 KIF4BQ2VIQ3 1234 aa23.47■■□□□ 1.35
TNFRSF25-207ENST00000453260 RSBN1LQ6PCB5 846 aaPredicted RBP23.47■■□□□ 1.35
TNFRSF25-207ENST00000453260 LINS1Q8NG48 757 aa23.47■■□□□ 1.35
TNFRSF25-207ENST00000453260 PLA2G12BQ9BX93 195 aa23.46■■□□□ 1.35
TNFRSF25-207ENST00000453260 USP17L3A6NCW0 530 aa23.45■■□□□ 1.34
TNFRSF25-207ENST00000453260 USP17L4A6NCW7 530 aa23.45■■□□□ 1.34
TNFRSF25-207ENST00000453260 EGFRP00533 1210 aa23.45■■□□□ 1.34
TNFRSF25-207ENST00000453260 HSPA8P11142 646 aaKnown RBP23.45■■□□□ 1.34
TNFRSF25-207ENST00000453260 EXOSC9Q06265 439 aaKnown RBP23.45■■□□□ 1.34
TNFRSF25-207ENST00000453260 USP17L1Q7RTZ2 530 aa23.45■■□□□ 1.34
TNFRSF25-207ENST00000453260 CCT4P50991 539 aaKnown RBP23.44■■□□□ 1.34
TNFRSF25-207ENST00000453260 SULF1Q8IWU6 871 aa23.44■■□□□ 1.34
TNFRSF25-207ENST00000453260 C2orf69Q8N8R5 385 aa23.44■■□□□ 1.34
TNFRSF25-207ENST00000453260 MPHOSPH8Q99549 860 aa23.44■■□□□ 1.34
TNFRSF25-207ENST00000453260 MED23Q9ULK4 1368 aa23.43■■□□□ 1.34
TNFRSF25-207ENST00000453260 AOC2O75106 756 aa23.43■■□□□ 1.34
TNFRSF25-207ENST00000453260 USP17L8P0C7I0 530 aa23.43■■□□□ 1.34
TNFRSF25-207ENST00000453260 ITGA6P23229 1130 aa23.43■■□□□ 1.34
TNFRSF25-207ENST00000453260 HUNKP57058 714 aa23.43■■□□□ 1.34
TNFRSF25-207ENST00000453260 ZNF280AP59817 542 aaPredicted RBP23.43■■□□□ 1.34
TNFRSF25-207ENST00000453260 FAM9BQ8IZU0 186 aa23.43■■□□□ 1.34
TNFRSF25-207ENST00000453260 ANKRD2Q9GZV1 360 aa23.43■■□□□ 1.34
TNFRSF25-207ENST00000453260 LEMD3Q9Y2U8 911 aa23.43■■□□□ 1.34
TNFRSF25-207ENST00000453260 ZNF609O15014 1411 aa23.42■■□□□ 1.34
TNFRSF25-207ENST00000453260 THSD7BQ9C0I4 1608 aa23.42■■□□□ 1.34
TNFRSF25-207ENST00000453260 SPEF2Q9C093 1822 aa23.42■■□□□ 1.34
TNFRSF25-207ENST00000453260 PSME4Q14997 1843 aa23.41■■□□□ 1.34
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms