RNA–Protein interactions for RNA: ENST00000452441.5

DDR1-239, Transcript of discoidin domain receptor tyrosine kinase 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene DDR1, Length 3,857 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDR1-239ENST00000452441 TPD52L1Q16890 204 aaPredicted RBP13.15□□□□□ -0.3
DDR1-239ENST00000452441 SALL3Q9BXA9 1300 aa13.15□□□□□ -0.3
DDR1-239ENST00000452441 CBX1P83916 185 aa13.15□□□□□ -0.3
DDR1-239ENST00000452441 IFIT5Q13325 482 aaKnown RBP13.15□□□□□ -0.3
DDR1-239ENST00000452441 EPHA10Q5JZY3 1008 aa13.15□□□□□ -0.3
DDR1-239ENST00000452441 TCHHQ07283 1943 aa13.15□□□□□ -0.3
DDR1-239ENST00000452441 FMN2Q9NZ56 1722 aa13.15□□□□□ -0.3
DDR1-239ENST00000452441 KINO60870 393 aaKnown RBP13.14□□□□□ -0.31
DDR1-239ENST00000452441 SYNE3Q6ZMZ3 975 aa13.14□□□□□ -0.31
DDR1-239ENST00000452441 DNAJC10Q8IXB1 793 aa13.14□□□□□ -0.31
DDR1-239ENST00000452441 CCDC171Q6TFL3 1326 aa13.14□□□□□ -0.31
DDR1-239ENST00000452441 PES1O00541 588 aaKnown RBP13.14□□□□□ -0.31
DDR1-239ENST00000452441 UBE2HP62256 183 aa13.14□□□□□ -0.31
DDR1-239ENST00000452441 COL9A3Q14050 684 aaPredicted RBP13.14□□□□□ -0.31
DDR1-239ENST00000452441 STK38Q15208 465 aa13.14□□□□□ -0.31
DDR1-239ENST00000452441 ANO6Q4KMQ2 910 aa13.14□□□□□ -0.31
DDR1-239ENST00000452441 TTLL5Q6EMB2 1281 aa13.14□□□□□ -0.31
DDR1-239ENST00000452441 RAD50Q92878 1312 aa13.14□□□□□ -0.31
DDR1-239ENST00000452441 ZNF335Q9H4Z2 1342 aaPredicted RBP13.14□□□□□ -0.31
DDR1-239ENST00000452441 DIP2AQ14689 1571 aa13.14□□□□□ -0.31
DDR1-239ENST00000452441 NEURL1BA8MQ27 555 aa13.14□□□□□ -0.31
DDR1-239ENST00000452441 LIG1P18858 919 aa13.14□□□□□ -0.31
DDR1-239ENST00000452441 PDCP20941 246 aa13.14□□□□□ -0.31
DDR1-239ENST00000452441 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP13.14□□□□□ -0.31
DDR1-239ENST00000452441 SLC27A2O14975 620 aa13.14□□□□□ -0.31
DDR1-239ENST00000452441 METTL22Q9BUU2 404 aaPredicted RBP13.14□□□□□ -0.31
DDR1-239ENST00000452441 CYP27B1O15528 508 aa13.13□□□□□ -0.31
DDR1-239ENST00000452441 NUP133Q8WUM0 1156 aa13.13□□□□□ -0.31
DDR1-239ENST00000452441 C8orf37Q96NL8 207 aa13.13□□□□□ -0.31
DDR1-239ENST00000452441 MCM5P33992 734 aa13.13□□□□□ -0.31
DDR1-239ENST00000452441 CCDC186Q7Z3E2 898 aa13.13□□□□□ -0.31
DDR1-239ENST00000452441 PI4K2BQ8TCG2 481 aa13.13□□□□□ -0.31
DDR1-239ENST00000452441 STAP2Q9UGK3 403 aa13.13□□□□□ -0.31
DDR1-239ENST00000452441 PTPN21Q16825 1174 aa13.13□□□□□ -0.31
DDR1-239ENST00000452441 NWD1Q149M9 1564 aa13.12□□□□□ -0.31
DDR1-239ENST00000452441 SASH1O94885 1247 aa13.12□□□□□ -0.31
DDR1-239ENST00000452441 PTGS1P23219 599 aa13.12□□□□□ -0.31
DDR1-239ENST00000452441 LSG1Q9H089 658 aaKnown RBP13.12□□□□□ -0.31
DDR1-239ENST00000452441 ZNF165P49910 485 aa13.12□□□□□ -0.31
DDR1-239ENST00000452441 HOMER1Q86YM7 354 aa13.12□□□□□ -0.31
DDR1-239ENST00000452441 MARCKSP29966 332 aaPredicted RBP13.12□□□□□ -0.31
DDR1-239ENST00000452441 SMIM5Q71RC9 77 aa13.12□□□□□ -0.31
DDR1-239ENST00000452441 ZSCAN31Q96LW9 406 aaPredicted RBP13.12□□□□□ -0.31
DDR1-239ENST00000452441 G3V3G9 751 aa13.11□□□□□ -0.31
DDR1-239ENST00000452441 DCAF8Q5TAQ9 597 aa13.11□□□□□ -0.31
DDR1-239ENST00000452441 PI16Q6UXB8 463 aa13.11□□□□□ -0.31
DDR1-239ENST00000452441 MICU3Q86XE3 530 aa13.11□□□□□ -0.31
DDR1-239ENST00000452441 PDILTQ8N807 584 aa13.11□□□□□ -0.31
DDR1-239ENST00000452441 ASAP1Q9ULH1 1129 aa13.11□□□□□ -0.31
DDR1-239ENST00000452441 VPS53Q5VIR6 699 aa13.11□□□□□ -0.31
DDR1-239ENST00000452441 GPHNQ9NQX3 736 aaPredicted RBP13.11□□□□□ -0.31
DDR1-239ENST00000452441 GJB4Q9NTQ9 266 aa13.11□□□□□ -0.31
DDR1-239ENST00000452441 MINDY4BA8MYZ0 360 aa13.1□□□□□ -0.31
DDR1-239ENST00000452441 LRRC24Q50LG9 513 aa13.1□□□□□ -0.31
DDR1-239ENST00000452441 PUS3Q9BZE2 481 aaKnown RBP13.1□□□□□ -0.31
DDR1-239ENST00000452441 SNAP23O00161 211 aa13.1□□□□□ -0.31
DDR1-239ENST00000452441 HOXB7P09629 217 aa13.1□□□□□ -0.31
DDR1-239ENST00000452441 TERF1P54274 439 aa13.1□□□□□ -0.31
DDR1-239ENST00000452441 LRMPQ12912 555 aa13.1□□□□□ -0.31
DDR1-239ENST00000452441 SYNE4Q8N205 404 aa13.1□□□□□ -0.31
DDR1-239ENST00000452441 ZNF219Q9P2Y4 722 aaPredicted RBP13.1□□□□□ -0.31
DDR1-239ENST00000452441 KIF3AQ9Y496 699 aa13.1□□□□□ -0.31
DDR1-239ENST00000452441 NOLC1Q14978 699 aaKnown RBP eCLIP13.1□□□□□ -0.31
DDR1-239ENST00000452441 LRRFIP1Q32MZ4 808 aaKnown RBP13.1□□□□□ -0.31
DDR1-239ENST00000452441 TTC6Q86TZ1 520 aa13.1□□□□□ -0.31
DDR1-239ENST00000452441 KLHL34Q8N239 644 aa13.1□□□□□ -0.31
DDR1-239ENST00000452441 RASSF8Q8NHQ8 419 aa13.1□□□□□ -0.31
DDR1-239ENST00000452441 IGKV5-2P06315 115 aa13.09□□□□□ -0.31
DDR1-239ENST00000452441 TNNI3KQ59H18 835 aa13.09□□□□□ -0.31
DDR1-239ENST00000452441 BABAM1Q9NWV8 329 aa13.09□□□□□ -0.31
DDR1-239ENST00000452441 FPGT-TNNI3KV9GXZ4 949 aa13.09□□□□□ -0.31
DDR1-239ENST00000452441 XRN1Q8IZH2 1706 aaKnown RBP13.09□□□□□ -0.31
DDR1-239ENST00000452441 FSIP1Q8NA03 581 aa13.09□□□□□ -0.31
DDR1-239ENST00000452441 SH2B1Q9NRF2 756 aaPredicted RBP13.09□□□□□ -0.31
DDR1-239ENST00000452441 LRP2BPQ9P2M1 347 aa13.09□□□□□ -0.31
DDR1-239ENST00000452441 FAM208AQ9UK61 1670 aaKnown RBP13.09□□□□□ -0.31
DDR1-239ENST00000452441 CCAR1Q8IX12 1150 aaKnown RBP13.09□□□□□ -0.31
DDR1-239ENST00000452441 ZKSCAN3Q9BRR0 538 aa13.09□□□□□ -0.31
DDR1-239ENST00000452441 MYL10Q9BUA6 226 aa13.09□□□□□ -0.31
DDR1-239ENST00000452441 DBNLQ9UJU6 430 aaKnown RBP13.09□□□□□ -0.31
DDR1-239ENST00000452441 MARF1Q9Y4F3 1742 aaKnown RBP13.08□□□□□ -0.31
DDR1-239ENST00000452441 TTC41PQ6P2S7 1318 aa13.08□□□□□ -0.32
DDR1-239ENST00000452441 A0A1B0GVL5 298 aa13.08□□□□□ -0.32
DDR1-239ENST00000452441 GOLGA8BA8MQT2 603 aa13.08□□□□□ -0.32
DDR1-239ENST00000452441 DYNC1I1O14576 645 aa13.08□□□□□ -0.32
DDR1-239ENST00000452441 ANKRD1Q15327 319 aa13.08□□□□□ -0.32
DDR1-239ENST00000452441 RAI14Q9P0K7 980 aa13.08□□□□□ -0.32
DDR1-239ENST00000452441 MTMR6Q9Y217 621 aa13.08□□□□□ -0.32
DDR1-239ENST00000452441 RPAP1Q9BWH6 1393 aaPredicted RBP13.08□□□□□ -0.32
DDR1-239ENST00000452441 CDK11BP21127 795 aaKnown RBP13.08□□□□□ -0.32
DDR1-239ENST00000452441 ATP6V1AP38606 617 aa13.08□□□□□ -0.32
DDR1-239ENST00000452441 NRBP1Q9UHY1 535 aa13.08□□□□□ -0.32
DDR1-239ENST00000452441 A0A1B0GUL7 405 aa13.08□□□□□ -0.32
DDR1-239ENST00000452441 DHX16O60231 1041 aaKnown RBP13.08□□□□□ -0.32
DDR1-239ENST00000452441 TYRO3Q06418 890 aa13.08□□□□□ -0.32
DDR1-239ENST00000452441 MAP7D2Q96T17 732 aa13.08□□□□□ -0.32
DDR1-239ENST00000452441 CLIP2Q9UDT6 1046 aa13.08□□□□□ -0.32
DDR1-239ENST00000452441 A0A0G2JLW4 131 aa13.07□□□□□ -0.32
DDR1-239ENST00000452441 TAF5LO75529 589 aa13.07□□□□□ -0.32
DDR1-239ENST00000452441 SPECC1Q5M775 1068 aa13.07□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 16 ms