RNA–Protein interactions for RNA: ENST00000452029.1

TMEM87B-202, Transcript of transmembrane protein 87B, humanhuman

TSL 1 (best)

Gene TMEM87B, Length 461 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM87B-202ENST00000452029 LRP10Q7Z4F1 713 aa6.93□□□□□ -1.3
TMEM87B-202ENST00000452029 NPAS3Q8IXF0 933 aa6.93□□□□□ -1.3
TMEM87B-202ENST00000452029 KLRG1Q96E93 195 aa6.93□□□□□ -1.3
TMEM87B-202ENST00000452029 NIFKQ9BYG3 293 aaKnown RBP6.93□□□□□ -1.3
TMEM87B-202ENST00000452029 SPC25Q9HBM1 224 aa6.93□□□□□ -1.3
TMEM87B-202ENST00000452029 PGPEP1Q9NXJ5 209 aa6.93□□□□□ -1.3
TMEM87B-202ENST00000452029 POLR3DP05423 398 aaPredicted RBP6.92□□□□□ -1.3
TMEM87B-202ENST00000452029 GRM2Q14416 872 aa6.92□□□□□ -1.3
TMEM87B-202ENST00000452029 TRIP4Q15650 581 aaPredicted RBP6.92□□□□□ -1.3
TMEM87B-202ENST00000452029 PLEKHG6Q3KR16 790 aa6.92□□□□□ -1.3
TMEM87B-202ENST00000452029 PDE12Q6L8Q7 609 aaKnown RBP6.92□□□□□ -1.3
TMEM87B-202ENST00000452029 GALNT12Q8IXK2 581 aa6.92□□□□□ -1.3
TMEM87B-202ENST00000452029 C3orf58Q8NDZ4 430 aa6.92□□□□□ -1.3
TMEM87B-202ENST00000452029 STAG1Q8WVM7 1258 aa6.92□□□□□ -1.3
TMEM87B-202ENST00000452029 HNRNPLLQ8WVV9 542 aaKnown RBP6.92□□□□□ -1.3
TMEM87B-202ENST00000452029 DEPDC7Q96QD5 511 aa6.92□□□□□ -1.3
TMEM87B-202ENST00000452029 CHRDQ9H2X0 955 aa6.92□□□□□ -1.3
TMEM87B-202ENST00000452029 KANSL2Q9H9L4 492 aa6.92□□□□□ -1.3
TMEM87B-202ENST00000452029 KCNQ5Q9NR82 932 aa6.92□□□□□ -1.3
TMEM87B-202ENST00000452029 STRIP2Q9ULQ0 834 aa6.92□□□□□ -1.3
TMEM87B-202ENST00000452029 PRKAB1Q9Y478 270 aa6.92□□□□□ -1.3
TMEM87B-202ENST00000452029 PHACTR2O75167 634 aa6.91□□□□□ -1.3
TMEM87B-202ENST00000452029 EIF4A3P38919 411 aaKnown RBP6.91□□□□□ -1.3
TMEM87B-202ENST00000452029 AMPD3Q01432 767 aa6.91□□□□□ -1.3
TMEM87B-202ENST00000452029 CBLBQ13191 982 aa6.91□□□□□ -1.3
TMEM87B-202ENST00000452029 IER5Q5VY09 327 aa6.91□□□□□ -1.3
TMEM87B-202ENST00000452029 TRIM46Q7Z4K8 759 aa6.91□□□□□ -1.3
TMEM87B-202ENST00000452029 ZNF438Q7Z4V0 828 aa6.91□□□□□ -1.3
TMEM87B-202ENST00000452029 GLIS3Q8NEA6 775 aa6.91□□□□□ -1.3
TMEM87B-202ENST00000452029 TRIM56Q9BRZ2 755 aaKnown RBP6.91□□□□□ -1.3
TMEM87B-202ENST00000452029 TRIM55Q9BYV6 548 aa6.91□□□□□ -1.3
TMEM87B-202ENST00000452029 SUV39H2Q9H5I1 410 aa6.91□□□□□ -1.3
TMEM87B-202ENST00000452029 ELP3Q9H9T3 547 aa6.91□□□□□ -1.3
TMEM87B-202ENST00000452029 TMEM63CQ9P1W3 806 aa6.91□□□□□ -1.3
TMEM87B-202ENST00000452029 KCNMB2Q9Y691 235 aa6.91□□□□□ -1.3
TMEM87B-202ENST00000452029 MINDY4BA8MYZ0 360 aa6.9□□□□□ -1.3
TMEM87B-202ENST00000452029 F6X3S4 739 aa6.9□□□□□ -1.3
TMEM87B-202ENST00000452029 GSTT1P30711 240 aa6.9□□□□□ -1.3
TMEM87B-202ENST00000452029 INPP5BP32019 993 aa6.9□□□□□ -1.3
TMEM87B-202ENST00000452029 PTGIRP43119 386 aa6.9□□□□□ -1.3
TMEM87B-202ENST00000452029 IDH3AP50213 366 aa6.9□□□□□ -1.3
TMEM87B-202ENST00000452029 PWP1Q13610 501 aa6.9□□□□□ -1.3
TMEM87B-202ENST00000452029 RELL1Q8IUW5 271 aa6.9□□□□□ -1.3
TMEM87B-202ENST00000452029 ZNF280CQ8ND82 737 aa6.9□□□□□ -1.3
TMEM87B-202ENST00000452029 ZNF296Q8WUU4 475 aaPredicted RBP6.9□□□□□ -1.3
TMEM87B-202ENST00000452029 SUSD3Q96L08 255 aa6.9□□□□□ -1.3
TMEM87B-202ENST00000452029 TMEM74Q96NL1 305 aa6.9□□□□□ -1.3
TMEM87B-202ENST00000452029 ZSCAN10Q96SZ4 725 aaPredicted RBP6.9□□□□□ -1.3
TMEM87B-202ENST00000452029 NT5C1AQ9BXI3 368 aa6.9□□□□□ -1.3
TMEM87B-202ENST00000452029 IRF2BPLQ9H1B7 796 aa6.9□□□□□ -1.3
TMEM87B-202ENST00000452029 USP20Q9Y2K6 914 aa6.9□□□□□ -1.3
TMEM87B-202ENST00000452029 MSRB2Q9Y3D2 182 aa6.9□□□□□ -1.3
TMEM87B-202ENST00000452029 GADD45BO75293 160 aaPredicted RBP6.89□□□□□ -1.31
TMEM87B-202ENST00000452029 ALDH1A1P00352 501 aa6.89□□□□□ -1.31
TMEM87B-202ENST00000452029 GARTP22102 1010 aa6.89□□□□□ -1.31
TMEM87B-202ENST00000452029 COL9A2Q14055 689 aaPredicted RBP6.89□□□□□ -1.31
TMEM87B-202ENST00000452029 HIF1AQ16665 826 aa6.89□□□□□ -1.31
TMEM87B-202ENST00000452029 LILRB2Q8N423 598 aa6.89□□□□□ -1.31
TMEM87B-202ENST00000452029 RHPN1Q8TCX5 695 aa6.89□□□□□ -1.31
TMEM87B-202ENST00000452029 RHBDD1Q8TEB9 315 aa6.89□□□□□ -1.31
TMEM87B-202ENST00000452029 SH3TC2Q8TF17 1288 aa6.89□□□□□ -1.31
TMEM87B-202ENST00000452029 ANKRD24Q8TF21 1146 aa6.89□□□□□ -1.31
TMEM87B-202ENST00000452029 FANCLQ9NW38 375 aa6.89□□□□□ -1.31
TMEM87B-202ENST00000452029 DDX56Q9NY93 547 aaKnown RBP6.89□□□□□ -1.31
TMEM87B-202ENST00000452029 CHPF2Q9P2E5 772 aa6.89□□□□□ -1.31
TMEM87B-202ENST00000452029 PRKAG3Q9UGI9 489 aa6.89□□□□□ -1.31
TMEM87B-202ENST00000452029 TTF2Q9UNY4 1162 aaKnown RBP6.89□□□□□ -1.31
TMEM87B-202ENST00000452029 FNDC3AQ9Y2H6 1198 aaKnown RBP6.89□□□□□ -1.31
TMEM87B-202ENST00000452029 RTCBQ9Y3I0 505 aaKnown RBP6.89□□□□□ -1.31
TMEM87B-202ENST00000452029 RIPOR2Q9Y4F9 1068 aa6.89□□□□□ -1.31
TMEM87B-202ENST00000452029 LOC102724159A0A0B4J2E5 919 aa6.88□□□□□ -1.31
TMEM87B-202ENST00000452029 PLEKHD1A6NEE1 506 aa6.88□□□□□ -1.31
TMEM87B-202ENST00000452029 EREGO14944 169 aa6.88□□□□□ -1.31
TMEM87B-202ENST00000452029 U2SURPO15042 1029 aaKnown RBP6.88□□□□□ -1.31
TMEM87B-202ENST00000452029 GREM1O60565 184 aa6.88□□□□□ -1.31
TMEM87B-202ENST00000452029 CDC45O75419 566 aa6.88□□□□□ -1.31
TMEM87B-202ENST00000452029 GBP2P32456 591 aaPredicted RBP6.88□□□□□ -1.31
TMEM87B-202ENST00000452029 PWP2Q15269 919 aaKnown RBP6.88□□□□□ -1.31
TMEM87B-202ENST00000452029 FBXL19Q6PCT2 694 aa6.88□□□□□ -1.31
TMEM87B-202ENST00000452029 Q6ZVU0 165 aa6.88□□□□□ -1.31
TMEM87B-202ENST00000452029 KIAA0907Q7Z7F0 614 aaPredicted RBP6.88□□□□□ -1.31
TMEM87B-202ENST00000452029 RHOVQ96L33 236 aa6.88□□□□□ -1.31
TMEM87B-202ENST00000452029 CNTN3Q9P232 1028 aa6.88□□□□□ -1.31
TMEM87B-202ENST00000452029 UBAP1LF5GYI3 381 aa6.87□□□□□ -1.31
TMEM87B-202ENST00000452029 MEN1O00255 615 aa6.87□□□□□ -1.31
TMEM87B-202ENST00000452029 PPP1R12AO14974 1030 aaPredicted RBP6.87□□□□□ -1.31
TMEM87B-202ENST00000452029 GRNP28799 593 aaKnown RBP6.87□□□□□ -1.31
TMEM87B-202ENST00000452029 GSK3AP49840 483 aa6.87□□□□□ -1.31
TMEM87B-202ENST00000452029 ARSDP51689 593 aa6.87□□□□□ -1.31
TMEM87B-202ENST00000452029 CHMP4BP1P59074 171 aa6.87□□□□□ -1.31
TMEM87B-202ENST00000452029 KCNMA1Q12791 1236 aa6.87□□□□□ -1.31
TMEM87B-202ENST00000452029 CCDC85BQ15834 202 aaPredicted RBP6.87□□□□□ -1.31
TMEM87B-202ENST00000452029 KIAA0319Q5VV43 1072 aa6.87□□□□□ -1.31
TMEM87B-202ENST00000452029 PCNX4Q63HM2 1172 aa6.87□□□□□ -1.31
TMEM87B-202ENST00000452029 TMEM214Q6NUQ4 689 aaKnown RBP6.87□□□□□ -1.31
TMEM87B-202ENST00000452029 C1orf127Q8N9H9 656 aa6.87□□□□□ -1.31
TMEM87B-202ENST00000452029 NLRP3Q96P20 1036 aa6.87□□□□□ -1.31
TMEM87B-202ENST00000452029 CCDC113Q9H0I3 377 aa6.87□□□□□ -1.31
TMEM87B-202ENST00000452029 TMX1Q9H3N1 280 aa6.87□□□□□ -1.31
TMEM87B-202ENST00000452029 FAN1Q9Y2M0 1017 aa6.87□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 11.9 ms