RNA–Protein interactions for RNA: ENST00000449510.6

UBE3B-204, Transcript of ubiquitin protein ligase E3B, humanhuman

TSL 5

Gene UBE3B, Length 3,771 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3B-204ENST00000449510 TFCP2Q12800 502 aa14.31□□□□□ -0.12
UBE3B-204ENST00000449510 DHX8Q14562 1220 aaKnown RBP14.31□□□□□ -0.12
UBE3B-204ENST00000449510 IMMTQ16891 758 aaKnown RBP14.31□□□□□ -0.12
UBE3B-204ENST00000449510 CCDC70Q6NSX1 233 aa14.31□□□□□ -0.12
UBE3B-204ENST00000449510 TRMT44Q8IYL2 757 aaKnown RBP14.31□□□□□ -0.12
UBE3B-204ENST00000449510 SBNO2Q9Y2G9 1366 aa14.31□□□□□ -0.12
UBE3B-204ENST00000449510 CHGBP05060 677 aa14.31□□□□□ -0.12
UBE3B-204ENST00000449510 FANCCQ00597 558 aa14.31□□□□□ -0.12
UBE3B-204ENST00000449510 PPP2R3AQ06190 1150 aa14.31□□□□□ -0.12
UBE3B-204ENST00000449510 ZNF589Q86UQ0 364 aaPredicted RBP14.31□□□□□ -0.12
UBE3B-204ENST00000449510 DBNDD2Q9BQY9 259 aa14.31□□□□□ -0.12
UBE3B-204ENST00000449510 ZSWIM6Q9HCJ5 1215 aa14.31□□□□□ -0.12
UBE3B-204ENST00000449510 DDX41Q9UJV9 622 aaKnown RBP14.31□□□□□ -0.12
UBE3B-204ENST00000449510 ERICH2A1L162 156 aa14.3□□□□□ -0.12
UBE3B-204ENST00000449510 CAVIN2O95810 425 aa14.3□□□□□ -0.12
UBE3B-204ENST00000449510 CCDC158Q5M9N0 1113 aa14.3□□□□□ -0.12
UBE3B-204ENST00000449510 IL17REQ8NFR9 667 aa14.3□□□□□ -0.12
UBE3B-204ENST00000449510 PLEKHA4Q9H4M7 779 aa14.3□□□□□ -0.12
UBE3B-204ENST00000449510 ZBTB3Q9H5J0 574 aa14.3□□□□□ -0.12
UBE3B-204ENST00000449510 SPTLC3Q9NUV7 552 aa14.3□□□□□ -0.12
UBE3B-204ENST00000449510 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP14.3□□□□□ -0.12
UBE3B-204ENST00000449510 GTF2A1P52655 376 aaPredicted RBP14.3□□□□□ -0.12
UBE3B-204ENST00000449510 DPCR1Q3MIW9 517 aa14.3□□□□□ -0.12
UBE3B-204ENST00000449510 SSH3Q8TE77 659 aa14.3□□□□□ -0.12
UBE3B-204ENST00000449510 TARBP1Q13395 1621 aaKnown RBP14.3□□□□□ -0.12
UBE3B-204ENST00000449510 XAGE3Q8WTP9 111 aa14.3□□□□□ -0.12
UBE3B-204ENST00000449510 DRC1Q96MC2 740 aa14.3□□□□□ -0.12
UBE3B-204ENST00000449510 YTHDC2Q9H6S0 1430 aaKnown RBP14.29□□□□□ -0.12
UBE3B-204ENST00000449510 MTX1Q13505 466 aa14.29□□□□□ -0.12
UBE3B-204ENST00000449510 ENOX2Q16206 610 aaKnown RBP14.29□□□□□ -0.12
UBE3B-204ENST00000449510 LRRFIP1Q32MZ4 808 aaKnown RBP14.29□□□□□ -0.12
UBE3B-204ENST00000449510 TXLNBQ8N3L3 684 aa14.29□□□□□ -0.12
UBE3B-204ENST00000449510 PGBD1Q96JS3 809 aa14.29□□□□□ -0.12
UBE3B-204ENST00000449510 CRACR2AQ9BSW2 395 aa14.29□□□□□ -0.12
UBE3B-204ENST00000449510 KDM5AP29375 1690 aaKnown RBP14.29□□□□□ -0.12
UBE3B-204ENST00000449510 PBRM1Q86U86 1689 aa14.29□□□□□ -0.12
UBE3B-204ENST00000449510 ADGBQ8N7X0 1667 aa14.29□□□□□ -0.12
UBE3B-204ENST00000449510 ZNF827Q17R98 1081 aa14.29□□□□□ -0.12
UBE3B-204ENST00000449510 MCMDC2Q4G0Z9 681 aa14.29□□□□□ -0.12
UBE3B-204ENST00000449510 ZNF569Q5MCW4 686 aa14.29□□□□□ -0.12
UBE3B-204ENST00000449510 LMBR1LQ6UX01 489 aa14.29□□□□□ -0.12
UBE3B-204ENST00000449510 CAPZA3Q96KX2 299 aa14.29□□□□□ -0.12
UBE3B-204ENST00000449510 NUP88Q99567 741 aaPredicted RBP14.29□□□□□ -0.12
UBE3B-204ENST00000449510 RASSF4Q9H2L5 321 aa14.29□□□□□ -0.12
UBE3B-204ENST00000449510 CLCN6P51797 869 aa14.29□□□□□ -0.12
UBE3B-204ENST00000449510 SMC1AQ14683 1233 aaKnown RBP14.29□□□□□ -0.12
UBE3B-204ENST00000449510 ZSCAN26Q16670 478 aa14.29□□□□□ -0.12
UBE3B-204ENST00000449510 CCDC102BQ68D86 513 aa14.29□□□□□ -0.12
UBE3B-204ENST00000449510 SMARCE1Q969G3 411 aa14.29□□□□□ -0.12
UBE3B-204ENST00000449510 MAST1Q9Y2H9 1570 aa14.29□□□□□ -0.12
UBE3B-204ENST00000449510 ARHGAP30Q7Z6I6 1101 aaPredicted RBP14.28□□□□□ -0.12
UBE3B-204ENST00000449510 ZNF213O14771 459 aa14.28□□□□□ -0.12
UBE3B-204ENST00000449510 ZNF202O95125 648 aa14.28□□□□□ -0.12
UBE3B-204ENST00000449510 ATP1A3P13637 1013 aa14.28□□□□□ -0.12
UBE3B-204ENST00000449510 SUCLG2Q96I99 432 aa14.28□□□□□ -0.12
UBE3B-204ENST00000449510 TAF6LQ9Y6J9 622 aa14.28□□□□□ -0.12
UBE3B-204ENST00000449510 NPATQ14207 1427 aa14.28□□□□□ -0.12
UBE3B-204ENST00000449510 TTC41PQ6P2S7 1318 aa14.28□□□□□ -0.12
UBE3B-204ENST00000449510 COBLO75128 1261 aa14.28□□□□□ -0.12
UBE3B-204ENST00000449510 PDIA4P13667 645 aaKnown RBP14.28□□□□□ -0.12
UBE3B-204ENST00000449510 NDUFA8P51970 172 aa14.28□□□□□ -0.12
UBE3B-204ENST00000449510 ALG1Q9BT22 464 aa14.28□□□□□ -0.12
UBE3B-204ENST00000449510 SLC26A6Q9BXS9 759 aa14.28□□□□□ -0.12
UBE3B-204ENST00000449510 HMG20BQ9P0W2 317 aa14.28□□□□□ -0.12
UBE3B-204ENST00000449510 DHX32Q7L7V1 743 aaKnown RBP14.27□□□□□ -0.12
UBE3B-204ENST00000449510 STAMQ92783 540 aa14.27□□□□□ -0.12
UBE3B-204ENST00000449510 SMARCC1Q92922 1105 aaPredicted RBP14.27□□□□□ -0.12
UBE3B-204ENST00000449510 CCDC57Q2TAC2 916 aa14.27□□□□□ -0.13
UBE3B-204ENST00000449510 PUS7Q96PZ0 661 aaKnown RBP14.27□□□□□ -0.13
UBE3B-204ENST00000449510 MYL10Q9BUA6 226 aa14.27□□□□□ -0.13
UBE3B-204ENST00000449510 CNNM1Q9NRU3 951 aa14.27□□□□□ -0.13
UBE3B-204ENST00000449510 PRAMEF22A3QJZ6 481 aa14.27□□□□□ -0.13
UBE3B-204ENST00000449510 MNAT1P51948 309 aa14.27□□□□□ -0.13
UBE3B-204ENST00000449510 MICALL1Q8N3F8 863 aa14.27□□□□□ -0.13
UBE3B-204ENST00000449510 PI4K2BQ8TCG2 481 aa14.27□□□□□ -0.13
UBE3B-204ENST00000449510 BAG1Q99933 345 aaPredicted RBP14.27□□□□□ -0.13
UBE3B-204ENST00000449510 GPHNQ9NQX3 736 aaPredicted RBP14.27□□□□□ -0.13
UBE3B-204ENST00000449510 STAP2Q9UGK3 403 aa14.27□□□□□ -0.13
UBE3B-204ENST00000449510 AMOTL2Q9Y2J4 779 aa14.27□□□□□ -0.13
UBE3B-204ENST00000449510 KIAA1328Q86T90 577 aa14.26□□□□□ -0.13
UBE3B-204ENST00000449510 TDRD7Q8NHU6 1098 aaKnown RBP14.26□□□□□ -0.13
UBE3B-204ENST00000449510 MAPK8IP1Q9UQF2 711 aa14.26□□□□□ -0.13
UBE3B-204ENST00000449510 ETF1P62495 437 aaKnown RBP14.26□□□□□ -0.13
UBE3B-204ENST00000449510 KSR2Q6VAB6 950 aa14.26□□□□□ -0.13
UBE3B-204ENST00000449510 SAMD9LQ8IVG5 1584 aa14.26□□□□□ -0.13
UBE3B-204ENST00000449510 WDHD1O75717 1129 aaPredicted RBP14.26□□□□□ -0.13
UBE3B-204ENST00000449510 PNOCQ13519 176 aa14.26□□□□□ -0.13
UBE3B-204ENST00000449510 PROSER3Q2NL68 480 aa14.26□□□□□ -0.13
UBE3B-204ENST00000449510 SLC4A8Q2Y0W8 1093 aa14.26□□□□□ -0.13
UBE3B-204ENST00000449510 TRIM22Q8IYM9 498 aa14.26□□□□□ -0.13
UBE3B-204ENST00000449510 PHKBQ93100 1093 aa14.26□□□□□ -0.13
UBE3B-204ENST00000449510 PCDHA7Q9UN72 937 aa14.26□□□□□ -0.13
UBE3B-204ENST00000449510 IRX5P78411 483 aaPredicted RBP14.25□□□□□ -0.13
UBE3B-204ENST00000449510 NCBP3Q53F19 620 aaKnown RBP14.25□□□□□ -0.13
UBE3B-204ENST00000449510 PPP1R13BQ96KQ4 1090 aa14.25□□□□□ -0.13
UBE3B-204ENST00000449510 GUCA1BQ9UMX6 200 aa14.25□□□□□ -0.13
UBE3B-204ENST00000449510 MINDY4BA8MYZ0 360 aa14.25□□□□□ -0.13
UBE3B-204ENST00000449510 PRC1O43663 620 aa14.25□□□□□ -0.13
UBE3B-204ENST00000449510 MARCH6O60337 910 aa14.25□□□□□ -0.13
UBE3B-204ENST00000449510 SCRN1Q12765 414 aa14.25□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 14.4 ms