RNA–Protein interactions for RNA: ENST00000449131.6

BEST1-202, Transcript of bestrophin 1, humanhuman

TSL 1 (best) BASIC

Gene BEST1, Length 4,267 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BEST1-202ENST00000449131 IQSEC3Q9UPP2 1182 aaPredicted RBP8.28□□□□□ -1.08
BEST1-202ENST00000449131 CLTCL1P53675 1640 aa8.28□□□□□ -1.08
BEST1-202ENST00000449131 NEO1Q92859 1461 aa8.28□□□□□ -1.08
BEST1-202ENST00000449131 IQGAP3Q86VI3 1631 aa8.28□□□□□ -1.08
BEST1-202ENST00000449131 FSD2A1L4K1 749 aa8.28□□□□□ -1.08
BEST1-202ENST00000449131 LTKP29376 864 aa8.28□□□□□ -1.08
BEST1-202ENST00000449131 EIF5P55010 431 aaKnown RBP8.28□□□□□ -1.08
BEST1-202ENST00000449131 TIMM10P62072 90 aa8.28□□□□□ -1.08
BEST1-202ENST00000449131 APOBRQ0VD83 1088 aa8.28□□□□□ -1.08
BEST1-202ENST00000449131 SIRT2Q8IXJ6 389 aa8.28□□□□□ -1.08
BEST1-202ENST00000449131 GPT2Q8TD30 523 aa8.28□□□□□ -1.08
BEST1-202ENST00000449131 SNX14Q9Y5W7 946 aa8.28□□□□□ -1.08
BEST1-202ENST00000449131 E9PCH4 1651 aa8.27□□□□□ -1.08
BEST1-202ENST00000449131 CAVIN2O95810 425 aa8.27□□□□□ -1.09
BEST1-202ENST00000449131 SLC9C2Q5TAH2 1124 aa8.27□□□□□ -1.09
BEST1-202ENST00000449131 DZIP1Q86YF9 867 aaKnown RBP8.27□□□□□ -1.09
BEST1-202ENST00000449131 POLR3GO15318 223 aaPredicted RBP8.27□□□□□ -1.09
BEST1-202ENST00000449131 TYRO3Q06418 890 aa8.27□□□□□ -1.09
BEST1-202ENST00000449131 NOM1Q5C9Z4 860 aaKnown RBP8.27□□□□□ -1.09
BEST1-202ENST00000449131 CT47A1Q5JQC4 288 aaPredicted RBP8.27□□□□□ -1.09
BEST1-202ENST00000449131 ZNF790Q6PG37 636 aa8.27□□□□□ -1.09
BEST1-202ENST00000449131 FAM227BQ96M60 508 aa8.27□□□□□ -1.09
BEST1-202ENST00000449131 ALG1Q9BT22 464 aa8.27□□□□□ -1.09
BEST1-202ENST00000449131 USP44Q9H0E7 712 aa8.27□□□□□ -1.09
BEST1-202ENST00000449131 ZSWIM4Q9H7M6 989 aa8.27□□□□□ -1.09
BEST1-202ENST00000449131 BABAM1Q9NWV8 329 aa8.27□□□□□ -1.09
BEST1-202ENST00000449131 RTL1A6NKG5 1358 aa8.27□□□□□ -1.09
BEST1-202ENST00000449131 NEMFO60524 1076 aa8.27□□□□□ -1.09
BEST1-202ENST00000449131 ZPR1O75312 459 aa8.27□□□□□ -1.09
BEST1-202ENST00000449131 MARCKSP29966 332 aaPredicted RBP8.27□□□□□ -1.09
BEST1-202ENST00000449131 CCDC102BQ68D86 513 aa8.27□□□□□ -1.09
BEST1-202ENST00000449131 CCDC129Q6ZRS4 1044 aa8.27□□□□□ -1.09
BEST1-202ENST00000449131 IL17REQ8NFR9 667 aa8.27□□□□□ -1.09
BEST1-202ENST00000449131 CNKSR2Q8WXI2 1034 aa8.27□□□□□ -1.09
BEST1-202ENST00000449131 DCAF5Q96JK2 942 aa8.27□□□□□ -1.09
BEST1-202ENST00000449131 C19orf44Q9H6X5 657 aa8.27□□□□□ -1.09
BEST1-202ENST00000449131 KIAA0232Q92628 1395 aa8.27□□□□□ -1.09
BEST1-202ENST00000449131 ZBTB43O43298 467 aa8.26□□□□□ -1.09
BEST1-202ENST00000449131 ZSCAN12O43309 604 aa8.26□□□□□ -1.09
BEST1-202ENST00000449131 PRC1O43663 620 aa8.26□□□□□ -1.09
BEST1-202ENST00000449131 RBM5P52756 815 aaKnown RBP eCLIP8.26□□□□□ -1.09
BEST1-202ENST00000449131 GSDMDP57764 484 aa8.26□□□□□ -1.09
BEST1-202ENST00000449131 NLRP5P59047 1200 aa8.26□□□□□ -1.09
BEST1-202ENST00000449131 CATIPQ7Z7H3 387 aa8.26□□□□□ -1.09
BEST1-202ENST00000449131 ZSCAN29Q8IWY8 852 aaPredicted RBP8.26□□□□□ -1.09
BEST1-202ENST00000449131 HELBQ8NG08 1087 aaPredicted RBP8.26□□□□□ -1.09
BEST1-202ENST00000449131 ANKIB1Q9P2G1 1089 aa8.26□□□□□ -1.09
BEST1-202ENST00000449131 HOXB7P09629 217 aa8.26□□□□□ -1.09
BEST1-202ENST00000449131 UQCRFS1P1P0C7P4 283 aa8.26□□□□□ -1.09
BEST1-202ENST00000449131 SYKP43405 635 aa8.26□□□□□ -1.09
BEST1-202ENST00000449131 AXDND1Q5T1B0 1012 aaPredicted RBP8.26□□□□□ -1.09
BEST1-202ENST00000449131 DHX32Q7L7V1 743 aaKnown RBP8.26□□□□□ -1.09
BEST1-202ENST00000449131 MRPS27Q92552 414 aaKnown RBP8.26□□□□□ -1.09
BEST1-202ENST00000449131 DBNDD2Q9BQY9 259 aa8.26□□□□□ -1.09
BEST1-202ENST00000449131 UNC13BO14795 1591 aa8.26□□□□□ -1.09
BEST1-202ENST00000449131 CCDC66A2RUB6 948 aa8.26□□□□□ -1.09
BEST1-202ENST00000449131 DYNC1I1O14576 645 aa8.26□□□□□ -1.09
BEST1-202ENST00000449131 RNF113AO15541 343 aaKnown RBP8.26□□□□□ -1.09
BEST1-202ENST00000449131 KCNQ3O43525 872 aa8.26□□□□□ -1.09
BEST1-202ENST00000449131 EIF4A1P60842 406 aaKnown RBP8.26□□□□□ -1.09
BEST1-202ENST00000449131 SUCLG2Q96I99 432 aa8.26□□□□□ -1.09
BEST1-202ENST00000449131 BMP2KQ9NSY1 1161 aaPredicted RBP8.26□□□□□ -1.09
BEST1-202ENST00000449131 PTPDC1A2A3K4 754 aa8.26□□□□□ -1.09
BEST1-202ENST00000449131 SLC4A8Q2Y0W8 1093 aa8.26□□□□□ -1.09
BEST1-202ENST00000449131 UNC5CLQ8IV45 518 aa8.26□□□□□ -1.09
BEST1-202ENST00000449131 ZNF444Q8N0Y2 327 aaPredicted RBP8.26□□□□□ -1.09
BEST1-202ENST00000449131 CDC5LQ99459 802 aaKnown RBP8.26□□□□□ -1.09
BEST1-202ENST00000449131 SYNMO15061 1565 aa8.25□□□□□ -1.09
BEST1-202ENST00000449131 RAD50Q92878 1312 aa8.25□□□□□ -1.09
BEST1-202ENST00000449131 ERLIN1O75477 346 aa8.25□□□□□ -1.09
BEST1-202ENST00000449131 PSMD1Q99460 953 aa8.25□□□□□ -1.09
BEST1-202ENST00000449131 CCDC194A0A1B0GVG4 234 aa8.25□□□□□ -1.09
BEST1-202ENST00000449131 SLC27A2O14975 620 aa8.25□□□□□ -1.09
BEST1-202ENST00000449131 WTAPQ15007 396 aa8.25□□□□□ -1.09
BEST1-202ENST00000449131 TMCO3Q6UWJ1 677 aa8.25□□□□□ -1.09
BEST1-202ENST00000449131 KIAA1328Q86T90 577 aa8.25□□□□□ -1.09
BEST1-202ENST00000449131 AOPEPQ8N6M6 819 aa8.25□□□□□ -1.09
BEST1-202ENST00000449131 KCNG4Q8TDN1 519 aa8.25□□□□□ -1.09
BEST1-202ENST00000449131 METTL22Q9BUU2 404 aaPredicted RBP8.25□□□□□ -1.09
BEST1-202ENST00000449131 HECW2Q9P2P5 1572 aa8.25□□□□□ -1.09
BEST1-202ENST00000449131 SKILP12757 684 aa8.25□□□□□ -1.09
BEST1-202ENST00000449131 KIF4BQ2VIQ3 1234 aa8.25□□□□□ -1.09
BEST1-202ENST00000449131 CCDC181Q5TID7 509 aa8.25□□□□□ -1.09
BEST1-202ENST00000449131 EDC3Q96F86 508 aaKnown RBP8.25□□□□□ -1.09
BEST1-202ENST00000449131 PRIMPOLQ96LW4 560 aa8.25□□□□□ -1.09
BEST1-202ENST00000449131 KIDINS220Q9ULH0 1771 aa8.25□□□□□ -1.09
BEST1-202ENST00000449131 CYP7A1P22680 504 aa8.24□□□□□ -1.09
BEST1-202ENST00000449131 HSPA4P34932 840 aa8.24□□□□□ -1.09
BEST1-202ENST00000449131 SETQ01105 290 aaPredicted RBP8.24□□□□□ -1.09
BEST1-202ENST00000449131 HS1BP3Q53T59 392 aa8.24□□□□□ -1.09
BEST1-202ENST00000449131 TNNI3KQ59H18 835 aa8.24□□□□□ -1.09
BEST1-202ENST00000449131 FPGT-TNNI3KV9GXZ4 949 aa8.24□□□□□ -1.09
BEST1-202ENST00000449131 AOX1Q06278 1338 aa8.24□□□□□ -1.09
BEST1-202ENST00000449131 RIMBP3CA6NJZ7 1639 aa8.24□□□□□ -1.09
BEST1-202ENST00000449131 RIMBP3BA6NNM3 1639 aa8.24□□□□□ -1.09
BEST1-202ENST00000449131 RIMBP3Q9UFD9 1639 aa8.24□□□□□ -1.09
BEST1-202ENST00000449131 TMEM2Q9UHN6 1383 aa8.24□□□□□ -1.09
BEST1-202ENST00000449131 TSPY2A6NKD2 308 aa8.24□□□□□ -1.09
BEST1-202ENST00000449131 SPTLC2O15270 562 aa8.24□□□□□ -1.09
BEST1-202ENST00000449131 IL2RBP14784 551 aa8.24□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 16.8 ms