RNA–Protein interactions for RNA: ENST00000448940.5

CDC42BPA-209, Transcript of CDC42 binding protein kinase alpha, humanhuman

TSL 1 (best)

Gene CDC42BPA, Length 7,355 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPA-209ENST00000448940 XBP1P17861 261 aa6.68□□□□□ -1.34
CDC42BPA-209ENST00000448940 CNTROBQ8N137 903 aa6.68□□□□□ -1.34
CDC42BPA-209ENST00000448940 UBAC1Q9BSL1 405 aa6.68□□□□□ -1.34
CDC42BPA-209ENST00000448940 JAG2Q9Y219 1238 aa6.68□□□□□ -1.34
CDC42BPA-209ENST00000448940 F6X3S4 739 aa6.68□□□□□ -1.34
CDC42BPA-209ENST00000448940 GTF2IP78347 998 aa6.68□□□□□ -1.34
CDC42BPA-209ENST00000448940 TBC1D10BQ4KMP7 808 aaPredicted RBP6.68□□□□□ -1.34
CDC42BPA-209ENST00000448940 RC3H1Q5TC82 1133 aaKnown RBP6.68□□□□□ -1.34
CDC42BPA-209ENST00000448940 WDR66Q8TBY9 1149 aa6.68□□□□□ -1.34
CDC42BPA-209ENST00000448940 MYOM2P54296 1465 aa6.68□□□□□ -1.34
CDC42BPA-209ENST00000448940 BCORL1Q5H9F3 1711 aa6.68□□□□□ -1.34
CDC42BPA-209ENST00000448940 DPEP1P16444 411 aa6.68□□□□□ -1.34
CDC42BPA-209ENST00000448940 NAA16Q6N069 864 aaPredicted RBP6.68□□□□□ -1.34
CDC42BPA-209ENST00000448940 SLC17A8Q8NDX2 589 aa6.68□□□□□ -1.34
CDC42BPA-209ENST00000448940 AS3MTQ9HBK9 375 aa6.68□□□□□ -1.34
CDC42BPA-209ENST00000448940 SBNO2Q9Y2G9 1366 aa6.68□□□□□ -1.34
CDC42BPA-209ENST00000448940 TECPR2O15040 1411 aa6.68□□□□□ -1.34
CDC42BPA-209ENST00000448940 TRAF1Q13077 416 aa6.68□□□□□ -1.34
CDC42BPA-209ENST00000448940 TTLL5Q6EMB2 1281 aa6.68□□□□□ -1.34
CDC42BPA-209ENST00000448940 EHMT1Q9H9B1 1298 aa6.68□□□□□ -1.34
CDC42BPA-209ENST00000448940 GRM8O00222 908 aa6.68□□□□□ -1.34
CDC42BPA-209ENST00000448940 CYP27B1O15528 508 aa6.68□□□□□ -1.34
CDC42BPA-209ENST00000448940 IL13P35225 146 aa6.68□□□□□ -1.34
CDC42BPA-209ENST00000448940 TTC6Q86TZ1 520 aa6.68□□□□□ -1.34
CDC42BPA-209ENST00000448940 KIAA0825Q8IV33 1275 aa6.68□□□□□ -1.34
CDC42BPA-209ENST00000448940 TSKSQ9UJT2 592 aa6.68□□□□□ -1.34
CDC42BPA-209ENST00000448940 PNMA3Q9UL41 463 aa6.67□□□□□ -1.34
CDC42BPA-209ENST00000448940 IL15P40933 162 aaPredicted RBP6.67□□□□□ -1.34
CDC42BPA-209ENST00000448940 RETREG2Q8NC44 543 aa6.67□□□□□ -1.34
CDC42BPA-209ENST00000448940 AP5M1Q9H0R1 490 aa6.67□□□□□ -1.34
CDC42BPA-209ENST00000448940 CPSF1Q10570 1443 aaKnown RBP6.67□□□□□ -1.34
CDC42BPA-209ENST00000448940 SOS1Q07889 1333 aaPredicted RBP6.67□□□□□ -1.34
CDC42BPA-209ENST00000448940 MAP3K15Q6ZN16 1313 aa6.67□□□□□ -1.34
CDC42BPA-209ENST00000448940 LMTK2Q8IWU2 1503 aa6.67□□□□□ -1.34
CDC42BPA-209ENST00000448940 TRPA1O75762 1119 aa6.67□□□□□ -1.34
CDC42BPA-209ENST00000448940 CHRNA5P30532 468 aa6.67□□□□□ -1.34
CDC42BPA-209ENST00000448940 RAB3GAP1Q15042 981 aa6.67□□□□□ -1.34
CDC42BPA-209ENST00000448940 ZYXQ15942 572 aaKnown RBP6.67□□□□□ -1.34
CDC42BPA-209ENST00000448940 SYNE4Q8N205 404 aa6.67□□□□□ -1.34
CDC42BPA-209ENST00000448940 BRMS1Q9HCU9 246 aa6.67□□□□□ -1.34
CDC42BPA-209ENST00000448940 USP16Q9Y5T5 823 aa6.67□□□□□ -1.34
CDC42BPA-209ENST00000448940 MED14O60244 1454 aa6.67□□□□□ -1.34
CDC42BPA-209ENST00000448940 SPATA31E1Q6ZUB1 1445 aa6.67□□□□□ -1.34
CDC42BPA-209ENST00000448940 TEKT1Q969V4 418 aa6.67□□□□□ -1.34
CDC42BPA-209ENST00000448940 CARD14Q9BXL6 1004 aa6.67□□□□□ -1.34
CDC42BPA-209ENST00000448940 NAPBQ9H115 298 aa6.67□□□□□ -1.34
CDC42BPA-209ENST00000448940 ZNF277Q9NRM2 450 aaPredicted RBP6.67□□□□□ -1.34
CDC42BPA-209ENST00000448940 CTNNA3Q9UI47 895 aa6.67□□□□□ -1.34
CDC42BPA-209ENST00000448940 NOB1Q9ULX3 412 aaKnown RBP6.67□□□□□ -1.34
CDC42BPA-209ENST00000448940 CDC42BPAQ5VT25 1732 aa6.67□□□□□ -1.34
CDC42BPA-209ENST00000448940 TCP10Q12799 353 aa6.67□□□□□ -1.34
CDC42BPA-209ENST00000448940 GAS2L1Q99501 681 aaPredicted RBP6.67□□□□□ -1.34
CDC42BPA-209ENST00000448940 CDC42BPGQ6DT37 1551 aa6.67□□□□□ -1.34
CDC42BPA-209ENST00000448940 KBTBD13C9JR72 458 aa6.67□□□□□ -1.34
CDC42BPA-209ENST00000448940 TOMM70O94826 608 aa6.67□□□□□ -1.34
CDC42BPA-209ENST00000448940 SAFBQ15424 915 aaKnown RBP eCLIP6.67□□□□□ -1.34
CDC42BPA-209ENST00000448940 TAF1CQ15572 869 aaPredicted RBP6.67□□□□□ -1.34
CDC42BPA-209ENST00000448940 MAP3K11Q16584 847 aa6.67□□□□□ -1.34
CDC42BPA-209ENST00000448940 ANP32BQ92688 251 aaKnown RBP6.67□□□□□ -1.34
CDC42BPA-209ENST00000448940 CCDC97Q96F63 343 aaPredicted RBP6.67□□□□□ -1.34
CDC42BPA-209ENST00000448940 DENND2AQ9ULE3 1009 aa6.67□□□□□ -1.34
CDC42BPA-209ENST00000448940 CARMIL3Q8ND23 1372 aa6.67□□□□□ -1.34
CDC42BPA-209ENST00000448940 GOLGA6L22H0YM25 854 aa6.66□□□□□ -1.34
CDC42BPA-209ENST00000448940 SYT17Q9BSW7 474 aa6.66□□□□□ -1.34
CDC42BPA-209ENST00000448940 MYO3AQ8NEV4 1616 aa6.66□□□□□ -1.34
CDC42BPA-209ENST00000448940 GIGYF2Q6Y7W6 1299 aaKnown RBP6.66□□□□□ -1.34
CDC42BPA-209ENST00000448940 ATG3Q9NT62 314 aa6.66□□□□□ -1.34
CDC42BPA-209ENST00000448940 TTF2Q9UNY4 1162 aaKnown RBP6.66□□□□□ -1.34
CDC42BPA-209ENST00000448940 ITGA6P23229 1130 aa6.66□□□□□ -1.34
CDC42BPA-209ENST00000448940 EPHX2P34913 555 aa6.66□□□□□ -1.34
CDC42BPA-209ENST00000448940 XDHP47989 1333 aa6.66□□□□□ -1.34
CDC42BPA-209ENST00000448940 A0A0U1RQG5 324 aaPredicted RBP6.66□□□□□ -1.34
CDC42BPA-209ENST00000448940 PDE4BQ07343 736 aa6.66□□□□□ -1.34
CDC42BPA-209ENST00000448940 FAM161AQ3B820 660 aa6.66□□□□□ -1.34
CDC42BPA-209ENST00000448940 FAM184AQ8NB25 1140 aa6.66□□□□□ -1.34
CDC42BPA-209ENST00000448940 LRRCC1Q9C099 1032 aa6.66□□□□□ -1.34
CDC42BPA-209ENST00000448940 MFSD1Q9H3U5 465 aa6.66□□□□□ -1.34
CDC42BPA-209ENST00000448940 KDM4AO75164 1064 aa6.66□□□□□ -1.34
CDC42BPA-209ENST00000448940 MFSD14BQ5SR56 506 aa6.66□□□□□ -1.34
CDC42BPA-209ENST00000448940 DBNDD1Q9H9R9 158 aa6.66□□□□□ -1.34
CDC42BPA-209ENST00000448940 PTPRCP08575 1304 aa6.66□□□□□ -1.34
CDC42BPA-209ENST00000448940 TCP10L2B9ZVM9 353 aa6.66□□□□□ -1.34
CDC42BPA-209ENST00000448940 PTMAP06454 111 aaKnown RBP6.66□□□□□ -1.34
CDC42BPA-209ENST00000448940 MFSD14CQ5VZR4 134 aa6.66□□□□□ -1.34
CDC42BPA-209ENST00000448940 KIF1BPQ96EK5 621 aa6.66□□□□□ -1.34
CDC42BPA-209ENST00000448940 ALKQ9UM73 1620 aa6.65□□□□□ -1.34
CDC42BPA-209ENST00000448940 INO80Q9ULG1 1556 aaPredicted RBP6.65□□□□□ -1.34
CDC42BPA-209ENST00000448940 TULP4Q9NRJ4 1543 aa6.65□□□□□ -1.34
CDC42BPA-209ENST00000448940 ERVV-1B6SEH8 477 aa6.65□□□□□ -1.34
CDC42BPA-209ENST00000448940 USP17L8P0C7I0 530 aa6.65□□□□□ -1.34
CDC42BPA-209ENST00000448940 NFIXQ14938 502 aa6.65□□□□□ -1.34
CDC42BPA-209ENST00000448940 PES1O00541 588 aaKnown RBP6.65□□□□□ -1.34
CDC42BPA-209ENST00000448940 CYP7A1P22680 504 aa6.65□□□□□ -1.34
CDC42BPA-209ENST00000448940 COL23A1Q86Y22 540 aaPredicted RBP6.65□□□□□ -1.34
CDC42BPA-209ENST00000448940 GINS2Q9Y248 185 aa6.65□□□□□ -1.34
CDC42BPA-209ENST00000448940 SAMM50Q9Y512 469 aa6.65□□□□□ -1.34
CDC42BPA-209ENST00000448940 KCNJ6P48051 423 aa6.65□□□□□ -1.34
CDC42BPA-209ENST00000448940 TTC30AQ86WT1 665 aa6.65□□□□□ -1.34
CDC42BPA-209ENST00000448940 PHACTR3Q96KR7 559 aa6.65□□□□□ -1.34
CDC42BPA-209ENST00000448940 SNRKQ9NRH2 765 aa6.65□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 65.1 ms