RNA–Protein interactions for RNA: ENST00000447375.1

SSR4-205, Transcript of signal sequence receptor subunit 4, humanhuman

TSL 2

Gene SSR4, Length 427 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSR4-205ENST00000447375 GIGYF2Q6Y7W6 1299 aaKnown RBP16.13■□□□□ 0.17
SSR4-205ENST00000447375 DDX46Q7L014 1031 aaKnown RBP16.13■□□□□ 0.17
SSR4-205ENST00000447375 WWC1Q8IX03 1113 aa16.13■□□□□ 0.17
SSR4-205ENST00000447375 DBNDD1Q9H9R9 158 aa16.13■□□□□ 0.17
SSR4-205ENST00000447375 IFT57Q9NWB7 429 aa16.13■□□□□ 0.17
SSR4-205ENST00000447375 GGA3Q9NZ52 723 aa16.13■□□□□ 0.17
SSR4-205ENST00000447375 POLR2AP24928 1970 aaKnown RBP16.13■□□□□ 0.17
SSR4-205ENST00000447375 ANKRD36CQ5JPF3 1778 aa16.13■□□□□ 0.17
SSR4-205ENST00000447375 MKI67P46013 3256 aaKnown RBP16.13■□□□□ 0.17
SSR4-205ENST00000447375 POTEFA5A3E0 1075 aa16.12■□□□□ 0.17
SSR4-205ENST00000447375 FKTNO75072 461 aa16.12■□□□□ 0.17
SSR4-205ENST00000447375 GNAI1P63096 354 aa16.12■□□□□ 0.17
SSR4-205ENST00000447375 WASHC4Q2M389 1173 aa16.12■□□□□ 0.17
SSR4-205ENST00000447375 RIMBP2O15034 1052 aa16.11■□□□□ 0.17
SSR4-205ENST00000447375 TM4SF4P48230 202 aa16.11■□□□□ 0.17
SSR4-205ENST00000447375 GRAPQ13588 217 aa16.11■□□□□ 0.17
SSR4-205ENST00000447375 GRAPLQ8TC17 118 aaPredicted RBP16.11■□□□□ 0.17
SSR4-205ENST00000447375 KCNQ5Q9NR82 932 aa16.11■□□□□ 0.17
SSR4-205ENST00000447375 MBIPQ9NS73 344 aa16.11■□□□□ 0.17
SSR4-205ENST00000447375 ASTN2O75129 1339 aaPredicted RBP16.11■□□□□ 0.17
SSR4-205ENST00000447375 INTS3Q68E01 1043 aaKnown RBP16.1■□□□□ 0.17
SSR4-205ENST00000447375 TAF1P21675 1872 aa16.1■□□□□ 0.17
SSR4-205ENST00000447375 HCLS1P14317 486 aaPredicted RBP16.09■□□□□ 0.17
SSR4-205ENST00000447375 KRT24Q2M2I5 525 aa16.09■□□□□ 0.17
SSR4-205ENST00000447375 ANGEL2Q5VTE6 544 aaKnown RBP16.09■□□□□ 0.17
SSR4-205ENST00000447375 MOB2Q70IA6 237 aa16.09■□□□□ 0.17
SSR4-205ENST00000447375 TMC4Q7Z404 712 aa16.09■□□□□ 0.17
SSR4-205ENST00000447375 MIER1Q8N108 512 aa16.09■□□□□ 0.17
SSR4-205ENST00000447375 COLQQ9Y215 455 aaPredicted RBP16.09■□□□□ 0.17
SSR4-205ENST00000447375 UBE2Q2LH0YL09 131 aa16.08■□□□□ 0.16
SSR4-205ENST00000447375 DLL1O00548 723 aa16.08■□□□□ 0.16
SSR4-205ENST00000447375 ECE2O60344 883 aa16.08■□□□□ 0.16
SSR4-205ENST00000447375 HOXB7P09629 217 aa16.08■□□□□ 0.16
SSR4-205ENST00000447375 SCARF1Q14162 830 aa16.08■□□□□ 0.16
SSR4-205ENST00000447375 DOK7Q18PE1 504 aa16.08■□□□□ 0.16
SSR4-205ENST00000447375 WDR63Q8IWG1 891 aa16.08■□□□□ 0.16
SSR4-205ENST00000447375 NSFL1CQ9UNZ2 370 aaKnown RBP16.08■□□□□ 0.16
SSR4-205ENST00000447375 IL16Q14005 1332 aa16.08■□□□□ 0.16
SSR4-205ENST00000447375 ERBB4Q15303 1308 aa16.08■□□□□ 0.16
SSR4-205ENST00000447375 RTL9Q8NET4 1388 aa16.08■□□□□ 0.16
SSR4-205ENST00000447375 C6orf229H3BNL8 230 aa16.07■□□□□ 0.16
SSR4-205ENST00000447375 EIF2S2P20042 333 aaKnown RBP16.07■□□□□ 0.16
SSR4-205ENST00000447375 PDIA6Q15084 440 aa16.07■□□□□ 0.16
SSR4-205ENST00000447375 R3HDMLQ9H3Y0 253 aa16.07■□□□□ 0.16
SSR4-205ENST00000447375 DUOX1Q9NRD9 1551 aa16.06■□□□□ 0.16
SSR4-205ENST00000447375 VIL1P09327 827 aaKnown RBP16.06■□□□□ 0.16
SSR4-205ENST00000447375 SREBF2Q12772 1141 aa16.06■□□□□ 0.16
SSR4-205ENST00000447375 MKRN3Q13064 507 aaKnown RBP16.06■□□□□ 0.16
SSR4-205ENST00000447375 CFHR5Q9BXR6 569 aa16.06■□□□□ 0.16
SSR4-205ENST00000447375 POLLQ9UGP5 575 aa16.06■□□□□ 0.16
SSR4-205ENST00000447375 SALL2Q9Y467 1007 aaPredicted RBP16.06■□□□□ 0.16
SSR4-205ENST00000447375 TRIM17Q9Y577 477 aa16.06■□□□□ 0.16
SSR4-205ENST00000447375 DUSP27Q5VZP5 1158 aa16.05■□□□□ 0.16
SSR4-205ENST00000447375 LRP10Q7Z4F1 713 aa16.05■□□□□ 0.16
SSR4-205ENST00000447375 EYA3Q99504 573 aa16.05■□□□□ 0.16
SSR4-205ENST00000447375 PAPPA2Q9BXP8 1791 aa16.05■□□□□ 0.16
SSR4-205ENST00000447375 EN2P19622 333 aaPredicted RBP16.04■□□□□ 0.16
SSR4-205ENST00000447375 ZNF280AP59817 542 aaPredicted RBP16.04■□□□□ 0.16
SSR4-205ENST00000447375 TTLL12Q14166 644 aaPredicted RBP16.04■□□□□ 0.16
SSR4-205ENST00000447375 TRMT112Q9UI30 125 aaKnown RBP16.04■□□□□ 0.16
SSR4-205ENST00000447375 GPSM2P81274 684 aa16.03■□□□□ 0.16
SSR4-205ENST00000447375 NLRP10Q86W26 655 aa16.03■□□□□ 0.16
SSR4-205ENST00000447375 C8orf58Q8NAV2 365 aa16.03■□□□□ 0.16
SSR4-205ENST00000447375 TSR2Q969E8 191 aaKnown RBP16.03■□□□□ 0.16
SSR4-205ENST00000447375 SCAF8Q9UPN6 1271 aaKnown RBP16.03■□□□□ 0.16
SSR4-205ENST00000447375 PITPNM2Q9BZ72 1349 aa16.02■□□□□ 0.16
SSR4-205ENST00000447375 PROSER3Q2NL68 480 aa16.02■□□□□ 0.16
SSR4-205ENST00000447375 HDGFL1Q5TGJ6 251 aa16.02■□□□□ 0.16
SSR4-205ENST00000447375 PRAMEF18Q5VWM3 479 aa16.02■□□□□ 0.16
SSR4-205ENST00000447375 OTOP1Q7RTM1 612 aa16.02■□□□□ 0.16
SSR4-205ENST00000447375 NECTIN2Q92692 538 aa16.02■□□□□ 0.16
SSR4-205ENST00000447375 SH3TC1Q8TE82 1336 aa16.01■□□□□ 0.15
SSR4-205ENST00000447375 ZNF521Q96K83 1311 aa16.01■□□□□ 0.15
SSR4-205ENST00000447375 G3V3G9 751 aa16.01■□□□□ 0.15
SSR4-205ENST00000447375 ALDH1A1P00352 501 aa16.01■□□□□ 0.15
SSR4-205ENST00000447375 HSP90AB3PQ58FF7 597 aa16.01■□□□□ 0.15
SSR4-205ENST00000447375 DCAF8Q5TAQ9 597 aa16.01■□□□□ 0.15
SSR4-205ENST00000447375 SLC17A8Q8NDX2 589 aa16.01■□□□□ 0.15
SSR4-205ENST00000447375 AGBL3Q8NEM8 1001 aa16.01■□□□□ 0.15
SSR4-205ENST00000447375 TBC1D16Q8TBP0 767 aa16.01■□□□□ 0.15
SSR4-205ENST00000447375 CELF1Q92879 486 aaKnown RBP16.01■□□□□ 0.15
SSR4-205ENST00000447375 ZC3H12CQ9C0D7 883 aaKnown RBP16.01■□□□□ 0.15
SSR4-205ENST00000447375 DDX60Q8IY21 1712 aaKnown RBP16■□□□□ 0.15
SSR4-205ENST00000447375 ELL2O00472 640 aaPredicted RBP16■□□□□ 0.15
SSR4-205ENST00000447375 ANXA1P04083 346 aa16■□□□□ 0.15
SSR4-205ENST00000447375 TCIRG1Q13488 830 aa16■□□□□ 0.15
SSR4-205ENST00000447375 RSBN1LQ6PCB5 846 aaPredicted RBP16■□□□□ 0.15
SSR4-205ENST00000447375 TSPYL6Q8N831 410 aa16■□□□□ 0.15
SSR4-205ENST00000447375 CHMP4AQ9BY43 222 aa16■□□□□ 0.15
SSR4-205ENST00000447375 MYOZ2Q9NPC6 264 aa16■□□□□ 0.15
SSR4-205ENST00000447375 SPINK5Q9NQ38 1064 aaPredicted RBP16■□□□□ 0.15
SSR4-205ENST00000447375 CHPF2Q9P2E5 772 aa16■□□□□ 0.15
SSR4-205ENST00000447375 DBF4Q9UBU7 674 aaPredicted RBP16■□□□□ 0.15
SSR4-205ENST00000447375 PTPN22Q9Y2R2 807 aa16■□□□□ 0.15
SSR4-205ENST00000447375 USP17L8P0C7I0 530 aa15.99■□□□□ 0.15
SSR4-205ENST00000447375 TMEM106CQ9BVX2 250 aa15.99■□□□□ 0.15
SSR4-205ENST00000447375 HTTP42858 3142 aa15.99■□□□□ 0.15
SSR4-205ENST00000447375 FANCIQ9NVI1 1328 aa15.98■□□□□ 0.15
SSR4-205ENST00000447375 LRRC37AA6NMS7 1700 aa15.98■□□□□ 0.15
SSR4-205ENST00000447375 NF2P35240 595 aa15.98■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 39.3 ms