RNA–Protein interactions for RNA: ENST00000447271.1

PTPN3-205, Transcript of protein tyrosine phosphatase, non-receptor type 3, humanhuman

TSL 2

Gene PTPN3, Length 587 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN3-205ENST00000447271 NYAP1Q6ZVC0 841 aa7.72□□□□□ -1.17
PTPN3-205ENST00000447271 OTOP1Q7RTM1 612 aa7.72□□□□□ -1.17
PTPN3-205ENST00000447271 LINC00116Q8NCU8 138 aa7.72□□□□□ -1.17
PTPN3-205ENST00000447271 SIRT1Q96EB6 747 aa7.72□□□□□ -1.17
PTPN3-205ENST00000447271 EYA1Q99502 592 aa7.72□□□□□ -1.17
PTPN3-205ENST00000447271 CDX2Q99626 313 aaPredicted RBP7.72□□□□□ -1.17
PTPN3-205ENST00000447271 NLRP2Q9NX02 1062 aa7.72□□□□□ -1.17
PTPN3-205ENST00000447271 CNTNAP4Q9C0A0 1308 aa7.72□□□□□ -1.17
PTPN3-205ENST00000447271 LTBP3Q9NS15 1303 aa7.72□□□□□ -1.17
PTPN3-205ENST00000447271 POLR3AO14802 1390 aaPredicted RBP7.71□□□□□ -1.17
PTPN3-205ENST00000447271 EIF3AQ14152 1382 aaKnown RBP7.71□□□□□ -1.17
PTPN3-205ENST00000447271 MAST4O15021 2626 aa7.71□□□□□ -1.17
PTPN3-205ENST00000447271 BMP8BP34820 402 aa7.71□□□□□ -1.18
PTPN3-205ENST00000447271 TRAPPC3LQ5T215 181 aa7.71□□□□□ -1.18
PTPN3-205ENST00000447271 SWT1Q5T5J6 900 aaKnown RBP7.71□□□□□ -1.18
PTPN3-205ENST00000447271 ERMP1Q7Z2K6 904 aa7.71□□□□□ -1.18
PTPN3-205ENST00000447271 PRAM1Q96QH2 718 aa7.71□□□□□ -1.18
PTPN3-205ENST00000447271 GLIS2Q9BZE0 524 aaPredicted RBP7.71□□□□□ -1.18
PTPN3-205ENST00000447271 EPHX3Q9H6B9 360 aa7.71□□□□□ -1.18
PTPN3-205ENST00000447271 MON2Q7Z3U7 1717 aa7.71□□□□□ -1.18
PTPN3-205ENST00000447271 LTN1O94822 1766 aa7.71□□□□□ -1.18
PTPN3-205ENST00000447271 ZNF318Q5VUA4 2279 aa7.71□□□□□ -1.18
PTPN3-205ENST00000447271 TCF20Q9UGU0 1960 aaKnown RBP7.7□□□□□ -1.18
PTPN3-205ENST00000447271 MYCP01106 439 aaPredicted RBP7.7□□□□□ -1.18
PTPN3-205ENST00000447271 LMOD1P29536 600 aaPredicted RBP7.7□□□□□ -1.18
PTPN3-205ENST00000447271 PPP4CP60510 307 aa7.7□□□□□ -1.18
PTPN3-205ENST00000447271 NOM1Q5C9Z4 860 aaKnown RBP7.7□□□□□ -1.18
PTPN3-205ENST00000447271 TMC1Q8TDI8 760 aa7.7□□□□□ -1.18
PTPN3-205ENST00000447271 DCAF11Q8TEB1 546 aa7.7□□□□□ -1.18
PTPN3-205ENST00000447271 ZNF333Q96JL9 665 aa7.7□□□□□ -1.18
PTPN3-205ENST00000447271 PTPN22Q9Y2R2 807 aa7.7□□□□□ -1.18
PTPN3-205ENST00000447271 CPSF1Q10570 1443 aaKnown RBP7.69□□□□□ -1.18
PTPN3-205ENST00000447271 USP34Q70CQ2 3546 aa7.69□□□□□ -1.18
PTPN3-205ENST00000447271 SLC10A3P09131 477 aa7.69□□□□□ -1.18
PTPN3-205ENST00000447271 HNRNPUQ00839 825 aaKnown RBP eCLIP7.69□□□□□ -1.18
PTPN3-205ENST00000447271 KCNC4Q03721 635 aa7.69□□□□□ -1.18
PTPN3-205ENST00000447271 TDHQ8IZJ6 230 aa7.69□□□□□ -1.18
PTPN3-205ENST00000447271 PRKRIP1Q9H875 184 aaPredicted RBP7.69□□□□□ -1.18
PTPN3-205ENST00000447271 MRS2Q9HD23 443 aa7.69□□□□□ -1.18
PTPN3-205ENST00000447271 TPRP12270 2363 aaKnown RBP7.68□□□□□ -1.18
PTPN3-205ENST00000447271 RNF40O75150 1001 aa7.68□□□□□ -1.18
PTPN3-205ENST00000447271 EPS15P42566 896 aa7.68□□□□□ -1.18
PTPN3-205ENST00000447271 DDR1Q08345 913 aa7.68□□□□□ -1.18
PTPN3-205ENST00000447271 ZNF697Q5TEC3 545 aa7.68□□□□□ -1.18
PTPN3-205ENST00000447271 USP50Q70EL3 339 aaPredicted RBP7.68□□□□□ -1.18
PTPN3-205ENST00000447271 MYLIPQ8WY64 445 aa7.68□□□□□ -1.18
PTPN3-205ENST00000447271 ZNF516Q92618 1163 aa7.68□□□□□ -1.18
PTPN3-205ENST00000447271 MTRQ99707 1265 aa7.68□□□□□ -1.18
PTPN3-205ENST00000447271 GDF15Q99988 308 aa7.68□□□□□ -1.18
PTPN3-205ENST00000447271 WDFY4Q6ZS81 3184 aa7.67□□□□□ -1.18
PTPN3-205ENST00000447271 FAM86C2PA6NEL3 165 aa7.67□□□□□ -1.18
PTPN3-205ENST00000447271 RFC4P35249 363 aa7.67□□□□□ -1.18
PTPN3-205ENST00000447271 GPC2Q8N158 579 aa7.67□□□□□ -1.18
PTPN3-205ENST00000447271 POGKQ9P215 609 aa7.67□□□□□ -1.18
PTPN3-205ENST00000447271 SUPT16HQ9Y5B9 1047 aaKnown RBP7.67□□□□□ -1.18
PTPN3-205ENST00000447271 ADGRG1Q9Y653 693 aa7.67□□□□□ -1.18
PTPN3-205ENST00000447271 CACNA1SQ13698 1873 aa7.66□□□□□ -1.18
PTPN3-205ENST00000447271 CDH23Q9H251 3354 aa7.66□□□□□ -1.18
PTPN3-205ENST00000447271 FOSL2P15408 326 aa7.66□□□□□ -1.18
PTPN3-205ENST00000447271 C2CD5Q86YS7 1000 aa7.66□□□□□ -1.18
PTPN3-205ENST00000447271 IL27Q8NEV9 243 aa7.66□□□□□ -1.18
PTPN3-205ENST00000447271 ASB2Q96Q27 587 aa7.66□□□□□ -1.18
PTPN3-205ENST00000447271 KDM2AQ9Y2K7 1162 aa7.66□□□□□ -1.18
PTPN3-205ENST00000447271 RTCBQ9Y3I0 505 aaKnown RBP7.66□□□□□ -1.18
PTPN3-205ENST00000447271 RPGRIP1LQ68CZ1 1315 aa7.66□□□□□ -1.18
PTPN3-205ENST00000447271 LAMB2P55268 1798 aa7.66□□□□□ -1.18
PTPN3-205ENST00000447271 AFDNP55196 1824 aaKnown RBP7.66□□□□□ -1.18
PTPN3-205ENST00000447271 FLNBO75369 2602 aaKnown RBP7.65□□□□□ -1.18
PTPN3-205ENST00000447271 SMIM22K7EJ46 135 aa7.65□□□□□ -1.18
PTPN3-205ENST00000447271 GPR37O15354 613 aa7.65□□□□□ -1.18
PTPN3-205ENST00000447271 GPR37L1O60883 481 aa7.65□□□□□ -1.18
PTPN3-205ENST00000447271 RBM26Q5T8P6 1007 aaKnown RBP7.65□□□□□ -1.18
PTPN3-205ENST00000447271 NBPF11Q86T75 865 aa7.65□□□□□ -1.18
PTPN3-205ENST00000447271 ARHGEF25Q86VW2 580 aa7.65□□□□□ -1.18
PTPN3-205ENST00000447271 NGEFQ8N5V2 710 aa7.65□□□□□ -1.18
PTPN3-205ENST00000447271 USP38Q8NB14 1042 aa7.65□□□□□ -1.18
PTPN3-205ENST00000447271 NKX2-3Q8TAU0 364 aa7.65□□□□□ -1.18
PTPN3-205ENST00000447271 NECAB3Q96P71 396 aaPredicted RBP7.65□□□□□ -1.18
PTPN3-205ENST00000447271 GJA3Q9Y6H8 435 aa7.65□□□□□ -1.18
PTPN3-205ENST00000447271 MAP2P11137 1827 aaKnown RBP7.64□□□□□ -1.19
PTPN3-205ENST00000447271 ADGRF5Q8IZF2 1346 aa7.64□□□□□ -1.19
PTPN3-205ENST00000447271 TESPA1A2RU30 521 aaPredicted RBP7.64□□□□□ -1.19
PTPN3-205ENST00000447271 H0YIN7 160 aa7.64□□□□□ -1.19
PTPN3-205ENST00000447271 SLC9C1Q4G0N8 1177 aa7.64□□□□□ -1.19
PTPN3-205ENST00000447271 MPRIPQ6WCQ1 1025 aa7.64□□□□□ -1.19
PTPN3-205ENST00000447271 ATXN2LQ8WWM7 1075 aaKnown RBP7.64□□□□□ -1.19
PTPN3-205ENST00000447271 SMARCC1Q92922 1105 aaPredicted RBP7.64□□□□□ -1.19
PTPN3-205ENST00000447271 POLR3GLQ9BT43 218 aa7.64□□□□□ -1.19
PTPN3-205ENST00000447271 R3HDMLQ9H3Y0 253 aa7.64□□□□□ -1.19
PTPN3-205ENST00000447271 C11orf16Q9NQ32 467 aa7.64□□□□□ -1.19
PTPN3-205ENST00000447271 RALYQ9UKM9 306 aaKnown RBP7.64□□□□□ -1.19
PTPN3-205ENST00000447271 NAV2Q8IVL1 2488 aa7.63□□□□□ -1.19
PTPN3-205ENST00000447271 DCHS1Q96JQ0 3298 aa7.63□□□□□ -1.19
PTPN3-205ENST00000447271 ZBED9Q6R2W3 1325 aa7.63□□□□□ -1.19
PTPN3-205ENST00000447271 WASLO00401 505 aaPredicted RBP7.63□□□□□ -1.19
PTPN3-205ENST00000447271 POLRMTO00411 1230 aaKnown RBP7.63□□□□□ -1.19
PTPN3-205ENST00000447271 FECHP22830 423 aa7.63□□□□□ -1.19
PTPN3-205ENST00000447271 FAM9BQ8IZU0 186 aa7.63□□□□□ -1.19
PTPN3-205ENST00000447271 C2orf69Q8N8R5 385 aa7.63□□□□□ -1.19
PTPN3-205ENST00000447271 ZNF622Q969S3 477 aaKnown RBP eCLIP7.63□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms