RNA–Protein interactions for RNA: ENST00000447182.6

SDCBP-204, Transcript of syndecan binding protein, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene SDCBP, Length 2,103 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBP-204ENST00000447182 DNAJC25Q9H1X3 360 aa22.48■■□□□ 1.19
SDCBP-204ENST00000447182 PRDM4Q9UKN5 801 aa22.48■■□□□ 1.19
SDCBP-204ENST00000447182 SCRN1Q12765 414 aa22.47■■□□□ 1.19
SDCBP-204ENST00000447182 SARM1Q6SZW1 724 aa22.47■■□□□ 1.19
SDCBP-204ENST00000447182 RGPD5Q99666 1765 aa22.47■■□□□ 1.19
SDCBP-204ENST00000447182 CTAGE5O15320 804 aa22.46■■□□□ 1.19
SDCBP-204ENST00000447182 HSP90B1P14625 803 aaKnown RBP22.46■■□□□ 1.19
SDCBP-204ENST00000447182 ADD1P35611 737 aaKnown RBP22.46■■□□□ 1.19
SDCBP-204ENST00000447182 NRBP1Q9UHY1 535 aa22.46■■□□□ 1.19
SDCBP-204ENST00000447182 RCOR1Q9UKL0 485 aa22.46■■□□□ 1.19
SDCBP-204ENST00000447182 AFDNP55196 1824 aaKnown RBP22.46■■□□□ 1.19
SDCBP-204ENST00000447182 LRMPQ12912 555 aa22.46■■□□□ 1.19
SDCBP-204ENST00000447182 ATL3Q6DD88 541 aa22.46■■□□□ 1.19
SDCBP-204ENST00000447182 CCDC129Q6ZRS4 1044 aa22.46■■□□□ 1.19
SDCBP-204ENST00000447182 ORAI2Q96SN7 254 aa22.46■■□□□ 1.19
SDCBP-204ENST00000447182 LAMA4Q16363 1823 aa22.46■■□□□ 1.19
SDCBP-204ENST00000447182 FAM177BA6PVY3 158 aa22.45■■□□□ 1.18
SDCBP-204ENST00000447182 IQCB1Q15051 598 aa22.45■■□□□ 1.18
SDCBP-204ENST00000447182 KBTBD3Q8NAB2 608 aa22.45■■□□□ 1.18
SDCBP-204ENST00000447182 SEC62Q99442 399 aaKnown RBP22.45■■□□□ 1.18
SDCBP-204ENST00000447182 DBNDD2Q9BQY9 259 aa22.45■■□□□ 1.18
SDCBP-204ENST00000447182 AGXT2Q9BYV1 514 aa22.45■■□□□ 1.18
SDCBP-204ENST00000447182 MST1RQ04912 1400 aa22.45■■□□□ 1.18
SDCBP-204ENST00000447182 SYCP1Q15431 976 aa22.45■■□□□ 1.18
SDCBP-204ENST00000447182 DHX32Q7L7V1 743 aaKnown RBP22.45■■□□□ 1.18
SDCBP-204ENST00000447182 NSUN7Q8NE18 718 aaKnown RBP22.45■■□□□ 1.18
SDCBP-204ENST00000447182 DDX11Q96FC9 970 aa22.45■■□□□ 1.18
SDCBP-204ENST00000447182 DNAJC2Q99543 621 aaKnown RBP22.45■■□□□ 1.18
SDCBP-204ENST00000447182 CLIP2Q9UDT6 1046 aa22.45■■□□□ 1.18
SDCBP-204ENST00000447182 PALLDQ8WX93 1383 aa22.44■■□□□ 1.18
SDCBP-204ENST00000447182 PDCL2Q8N4E4 241 aa22.44■■□□□ 1.18
SDCBP-204ENST00000447182 NFATC2IPQ8NCF5 419 aa22.44■■□□□ 1.18
SDCBP-204ENST00000447182 ZNF496Q96IT1 587 aaPredicted RBP22.44■■□□□ 1.18
SDCBP-204ENST00000447182 SNRPA1P09661 255 aaKnown RBP22.43■■□□□ 1.18
SDCBP-204ENST00000447182 PHKG2P15735 406 aa22.43■■□□□ 1.18
SDCBP-204ENST00000447182 PPP4R3BQ5MIZ7 849 aa22.43■■□□□ 1.18
SDCBP-204ENST00000447182 STOX1Q6ZVD7 989 aa22.43■■□□□ 1.18
SDCBP-204ENST00000447182 RAPGEF4Q8WZA2 1011 aa22.43■■□□□ 1.18
SDCBP-204ENST00000447182 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP22.43■■□□□ 1.18
SDCBP-204ENST00000447182 ARFGEF2Q9Y6D5 1785 aa22.43■■□□□ 1.18
SDCBP-204ENST00000447182 ABCC6O95255 1503 aa22.43■■□□□ 1.18
SDCBP-204ENST00000447182 SMTNL1A8MU46 457 aa22.43■■□□□ 1.18
SDCBP-204ENST00000447182 UBE3BQ7Z3V4 1068 aa22.43■■□□□ 1.18
SDCBP-204ENST00000447182 MRFAP1L1Q96HT8 127 aa22.43■■□□□ 1.18
SDCBP-204ENST00000447182 DSCC1Q9BVC3 393 aa22.43■■□□□ 1.18
SDCBP-204ENST00000447182 NDUFB9Q9Y6M9 179 aa22.43■■□□□ 1.18
SDCBP-204ENST00000447182 CASP7P55210 303 aa22.42■■□□□ 1.18
SDCBP-204ENST00000447182 STX1AQ16623 288 aa22.42■■□□□ 1.18
SDCBP-204ENST00000447182 HELLSQ9NRZ9 838 aa22.42■■□□□ 1.18
SDCBP-204ENST00000447182 ZNF142P52746 1687 aaPredicted RBP22.42■■□□□ 1.18
SDCBP-204ENST00000447182 CHGBP05060 677 aa22.42■■□□□ 1.18
SDCBP-204ENST00000447182 CACTINQ8WUQ7 758 aaKnown RBP22.42■■□□□ 1.18
SDCBP-204ENST00000447182 PLEKHG2Q9H7P9 1386 aa22.42■■□□□ 1.18
SDCBP-204ENST00000447182 GOLGA6L19H0YKK7 550 aa22.41■■□□□ 1.18
SDCBP-204ENST00000447182 NEMFO60524 1076 aa22.41■■□□□ 1.18
SDCBP-204ENST00000447182 CTDNEP1O95476 244 aa22.41■■□□□ 1.18
SDCBP-204ENST00000447182 FGD1P98174 961 aa22.41■■□□□ 1.18
SDCBP-204ENST00000447182 EXOSC10Q01780 885 aaKnown RBP22.41■■□□□ 1.18
SDCBP-204ENST00000447182 DDX46Q7L014 1031 aaKnown RBP22.41■■□□□ 1.18
SDCBP-204ENST00000447182 PAXBP1Q9Y5B6 917 aa22.41■■□□□ 1.18
SDCBP-204ENST00000447182 USP16Q9Y5T5 823 aa22.41■■□□□ 1.18
SDCBP-204ENST00000447182 SALL1Q9NSC2 1324 aa22.41■■□□□ 1.18
SDCBP-204ENST00000447182 UTP14CQ5TAP6 766 aaKnown RBP22.4■■□□□ 1.18
SDCBP-204ENST00000447182 LMOD2Q6P5Q4 547 aa22.4■■□□□ 1.18
SDCBP-204ENST00000447182 CCAR1Q8IX12 1150 aaKnown RBP22.4■■□□□ 1.18
SDCBP-204ENST00000447182 SNW1Q13573 536 aaKnown RBP22.4■■□□□ 1.18
SDCBP-204ENST00000447182 CCDC144BQ3MJ40 725 aa22.4■■□□□ 1.18
SDCBP-204ENST00000447182 CCDC144CPQ8IYA2 1237 aa22.4■■□□□ 1.18
SDCBP-204ENST00000447182 LRRC2Q9BYS8 371 aa22.4■■□□□ 1.18
SDCBP-204ENST00000447182 A0A087WZG4 1122 aa22.39■■□□□ 1.18
SDCBP-204ENST00000447182 PTPDC1A2A3K4 754 aa22.39■■□□□ 1.18
SDCBP-204ENST00000447182 TNNT1P13805 278 aa22.39■■□□□ 1.18
SDCBP-204ENST00000447182 C16orf45Q96MC5 204 aaPredicted RBP22.39■■□□□ 1.18
SDCBP-204ENST00000447182 ZNF396Q96N95 335 aaPredicted RBP22.39■■□□□ 1.18
SDCBP-204ENST00000447182 GPR108Q9NPR9 543 aa22.39■■□□□ 1.18
SDCBP-204ENST00000447182 TMEM94Q12767 1356 aa22.39■■□□□ 1.17
SDCBP-204ENST00000447182 ZSCAN20P17040 1043 aaPredicted RBP22.39■■□□□ 1.17
SDCBP-204ENST00000447182 TATP17735 454 aaPredicted RBP22.39■■□□□ 1.17
SDCBP-204ENST00000447182 ATP2B3Q16720 1220 aa22.39■■□□□ 1.17
SDCBP-204ENST00000447182 C11orf57Q6ZUT1 292 aaPredicted RBP22.39■■□□□ 1.17
SDCBP-204ENST00000447182 KRT28Q7Z3Y7 464 aa22.39■■□□□ 1.17
SDCBP-204ENST00000447182 IFNL2Q8IZJ0 200 aa22.39■■□□□ 1.17
SDCBP-204ENST00000447182 ENGASEQ8NFI3 743 aa22.39■■□□□ 1.17
SDCBP-204ENST00000447182 CHMP4CQ96CF2 233 aa22.39■■□□□ 1.17
SDCBP-204ENST00000447182 RBM6P78332 1123 aaKnown RBP22.38■■□□□ 1.17
SDCBP-204ENST00000447182 CCDC73Q6ZRK6 1079 aa22.38■■□□□ 1.17
SDCBP-204ENST00000447182 LRRC8AQ8IWT6 810 aa22.38■■□□□ 1.17
SDCBP-204ENST00000447182 GOLPH3LQ9H4A5 285 aa22.38■■□□□ 1.17
SDCBP-204ENST00000447182 KIF1AQ12756 1690 aa22.37■■□□□ 1.17
SDCBP-204ENST00000447182 FAM160A1Q05DH4 1040 aa22.37■■□□□ 1.17
SDCBP-204ENST00000447182 DMTNQ08495 405 aa22.37■■□□□ 1.17
SDCBP-204ENST00000447182 ZMYM1Q5SVZ6 1142 aa22.37■■□□□ 1.17
SDCBP-204ENST00000447182 TTC5Q8N0Z6 440 aa22.37■■□□□ 1.17
SDCBP-204ENST00000447182 PLBD2Q8NHP8 589 aa22.37■■□□□ 1.17
SDCBP-204ENST00000447182 FMNL2Q96PY5 1086 aa22.37■■□□□ 1.17
SDCBP-204ENST00000447182 PAG1Q9NWQ8 432 aa22.37■■□□□ 1.17
SDCBP-204ENST00000447182 CEBPZQ03701 1054 aaKnown RBP22.37■■□□□ 1.17
SDCBP-204ENST00000447182 NCBP1Q09161 790 aaKnown RBP22.37■■□□□ 1.17
SDCBP-204ENST00000447182 APOBRQ0VD83 1088 aa22.37■■□□□ 1.17
SDCBP-204ENST00000447182 ZNF274Q96GC6 653 aaPredicted RBP22.37■■□□□ 1.17
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms