RNA–Protein interactions for RNA: ENST00000446026.1

SMIM12-204, Transcript of small integral membrane protein 12, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMIM12, Length 2,817 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMIM12-204ENST00000446026 NARFQ9UHQ1 456 aa10.66□□□□□ -0.7
SMIM12-204ENST00000446026 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP10.66□□□□□ -0.7
SMIM12-204ENST00000446026 ADCY9O60503 1353 aa10.66□□□□□ -0.7
SMIM12-204ENST00000446026 LRRCC1Q9C099 1032 aa10.66□□□□□ -0.7
SMIM12-204ENST00000446026 PHAXQ9H814 394 aaKnown RBP10.66□□□□□ -0.7
SMIM12-204ENST00000446026 BCL2L12Q9HB09 334 aa10.66□□□□□ -0.7
SMIM12-204ENST00000446026 KIF3AQ9Y496 699 aa10.66□□□□□ -0.7
SMIM12-204ENST00000446026 SALL3Q9BXA9 1300 aa10.65□□□□□ -0.7
SMIM12-204ENST00000446026 GYS1P13807 737 aa10.65□□□□□ -0.7
SMIM12-204ENST00000446026 CHMLP26374 656 aa10.65□□□□□ -0.7
SMIM12-204ENST00000446026 CERS3Q8IU89 383 aa10.65□□□□□ -0.7
SMIM12-204ENST00000446026 C17orf53Q8N3J3 647 aaPredicted RBP10.65□□□□□ -0.7
SMIM12-204ENST00000446026 ARHGEF1Q92888 912 aaKnown RBP10.65□□□□□ -0.7
SMIM12-204ENST00000446026 ZFP91Q96JP5 570 aaPredicted RBP10.65□□□□□ -0.7
SMIM12-204ENST00000446026 ANXA1P04083 346 aa10.65□□□□□ -0.71
SMIM12-204ENST00000446026 CWC22Q9HCG8 908 aaKnown RBP10.65□□□□□ -0.71
SMIM12-204ENST00000446026 SBF1O95248 1867 aa10.65□□□□□ -0.71
SMIM12-204ENST00000446026 CPA1P15085 419 aa10.64□□□□□ -0.71
SMIM12-204ENST00000446026 TM4SF1P30408 202 aa10.64□□□□□ -0.71
SMIM12-204ENST00000446026 EIF5P55010 431 aaKnown RBP10.64□□□□□ -0.71
SMIM12-204ENST00000446026 AMIGO3Q86WK7 504 aa10.64□□□□□ -0.71
SMIM12-204ENST00000446026 PRIMPOLQ96LW4 560 aa10.64□□□□□ -0.71
SMIM12-204ENST00000446026 STK31Q9BXU1 1019 aa10.64□□□□□ -0.71
SMIM12-204ENST00000446026 FER1L6Q2WGJ9 1857 aa10.64□□□□□ -0.71
SMIM12-204ENST00000446026 TIAM2Q8IVF5 1701 aa10.64□□□□□ -0.71
SMIM12-204ENST00000446026 CCT4P50991 539 aaKnown RBP10.64□□□□□ -0.71
SMIM12-204ENST00000446026 TAF7Q15545 349 aaPredicted RBP10.64□□□□□ -0.71
SMIM12-204ENST00000446026 OSBPL3Q9H4L5 887 aa10.64□□□□□ -0.71
SMIM12-204ENST00000446026 RFC4P35249 363 aa10.63□□□□□ -0.71
SMIM12-204ENST00000446026 HMGN5P82970 282 aaKnown RBP10.63□□□□□ -0.71
SMIM12-204ENST00000446026 GTF2F1P35269 517 aaKnown RBP eCLIP10.63□□□□□ -0.71
SMIM12-204ENST00000446026 USP44Q9H0E7 712 aa10.63□□□□□ -0.71
SMIM12-204ENST00000446026 BTBD11A6QL63 1104 aa10.62□□□□□ -0.71
SMIM12-204ENST00000446026 BRD1O95696 1058 aa10.62□□□□□ -0.71
SMIM12-204ENST00000446026 HOXB7P09629 217 aa10.62□□□□□ -0.71
SMIM12-204ENST00000446026 SNRPA1P09661 255 aaKnown RBP10.62□□□□□ -0.71
SMIM12-204ENST00000446026 EIF2S2P20042 333 aaKnown RBP10.62□□□□□ -0.71
SMIM12-204ENST00000446026 KCNQ4P56696 695 aa10.62□□□□□ -0.71
SMIM12-204ENST00000446026 LRSAM1Q6UWE0 723 aa10.62□□□□□ -0.71
SMIM12-204ENST00000446026 DNAJC10Q8IXB1 793 aa10.62□□□□□ -0.71
SMIM12-204ENST00000446026 CLEC4GQ6UXB4 293 aa10.62□□□□□ -0.71
SMIM12-204ENST00000446026 CARMIL3Q8ND23 1372 aa10.61□□□□□ -0.71
SMIM12-204ENST00000446026 LRRC37AA6NMS7 1700 aa10.61□□□□□ -0.71
SMIM12-204ENST00000446026 NBPF7P0C2Y1 421 aaPredicted RBP10.61□□□□□ -0.71
SMIM12-204ENST00000446026 ATP8B2P98198 1209 aa10.61□□□□□ -0.71
SMIM12-204ENST00000446026 NOLC1Q14978 699 aaKnown RBP eCLIP10.61□□□□□ -0.71
SMIM12-204ENST00000446026 ZNF496Q96IT1 587 aaPredicted RBP10.61□□□□□ -0.71
SMIM12-204ENST00000446026 PARP3Q9Y6F1 533 aa10.61□□□□□ -0.71
SMIM12-204ENST00000446026 ZC3H4Q9UPT8 1303 aaKnown RBP10.61□□□□□ -0.71
SMIM12-204ENST00000446026 SURF6O75683 361 aaKnown RBP10.61□□□□□ -0.71
SMIM12-204ENST00000446026 RASEFQ8IZ41 740 aa10.61□□□□□ -0.71
SMIM12-204ENST00000446026 POLRMTO00411 1230 aaKnown RBP10.6□□□□□ -0.71
SMIM12-204ENST00000446026 COL9A3Q14050 684 aaPredicted RBP10.6□□□□□ -0.71
SMIM12-204ENST00000446026 PPP1R42Q7Z4L9 355 aa10.6□□□□□ -0.71
SMIM12-204ENST00000446026 KCNQ3O43525 872 aa10.6□□□□□ -0.71
SMIM12-204ENST00000446026 CUL4AQ13619 759 aa10.6□□□□□ -0.71
SMIM12-204ENST00000446026 USP48Q86UV5 1035 aa10.6□□□□□ -0.71
SMIM12-204ENST00000446026 PTCD1O75127 700 aaKnown RBP10.59□□□□□ -0.71
SMIM12-204ENST00000446026 ZPR1O75312 459 aa10.59□□□□□ -0.71
SMIM12-204ENST00000446026 MMP10P09238 476 aa10.59□□□□□ -0.71
SMIM12-204ENST00000446026 UBTFL1P0CB47 393 aaPredicted RBP10.59□□□□□ -0.71
SMIM12-204ENST00000446026 IRX3P78415 501 aaPredicted RBP10.59□□□□□ -0.71
SMIM12-204ENST00000446026 CWC27Q6UX04 472 aaKnown RBP10.59□□□□□ -0.71
SMIM12-204ENST00000446026 CNPY2Q9Y2B0 182 aa10.59□□□□□ -0.71
SMIM12-204ENST00000446026 ZBTB1Q9Y2K1 713 aa10.59□□□□□ -0.71
SMIM12-204ENST00000446026 PHF14O94880 888 aa10.59□□□□□ -0.71
SMIM12-204ENST00000446026 LARGE1O95461 756 aa10.59□□□□□ -0.71
SMIM12-204ENST00000446026 HDGFL1Q5TGJ6 251 aa10.59□□□□□ -0.71
SMIM12-204ENST00000446026 CCDC30Q5VVM6 783 aa10.59□□□□□ -0.71
SMIM12-204ENST00000446026 KLHL34Q8N239 644 aa10.59□□□□□ -0.71
SMIM12-204ENST00000446026 SRCIN1Q9C0H9 1055 aa10.59□□□□□ -0.71
SMIM12-204ENST00000446026 TTC12Q9H892 705 aaPredicted RBP10.59□□□□□ -0.71
SMIM12-204ENST00000446026 ERVV-1B6SEH8 477 aa10.58□□□□□ -0.72
SMIM12-204ENST00000446026 SRGAP3O43295 1099 aa10.58□□□□□ -0.72
SMIM12-204ENST00000446026 GNAI3P08754 354 aa10.58□□□□□ -0.72
SMIM12-204ENST00000446026 PIBF1Q8WXW3 757 aa10.58□□□□□ -0.72
SMIM12-204ENST00000446026 ZBTB9Q96C00 473 aa10.58□□□□□ -0.72
SMIM12-204ENST00000446026 SLC39A6Q13433 755 aa10.58□□□□□ -0.72
SMIM12-204ENST00000446026 SECISBP2LQ93073 1101 aaKnown RBP10.58□□□□□ -0.72
SMIM12-204ENST00000446026 CACNA1SQ13698 1873 aa10.58□□□□□ -0.72
SMIM12-204ENST00000446026 DDX60Q8IY21 1712 aaKnown RBP10.58□□□□□ -0.72
SMIM12-204ENST00000446026 RPAP1Q9BWH6 1393 aaPredicted RBP10.58□□□□□ -0.72
SMIM12-204ENST00000446026 CAMTA2O94983 1202 aa10.57□□□□□ -0.72
SMIM12-204ENST00000446026 MCCP23508 829 aa10.57□□□□□ -0.72
SMIM12-204ENST00000446026 EIF4A1P60842 406 aaKnown RBP10.57□□□□□ -0.72
SMIM12-204ENST00000446026 NLGN2Q8NFZ4 835 aa10.57□□□□□ -0.72
SMIM12-204ENST00000446026 PI4K2BQ8TCG2 481 aa10.57□□□□□ -0.72
SMIM12-204ENST00000446026 DNAJC2Q99543 621 aaKnown RBP10.57□□□□□ -0.72
SMIM12-204ENST00000446026 ZNF652Q9Y2D9 606 aa10.57□□□□□ -0.72
SMIM12-204ENST00000446026 WDR90Q96KV7 1748 aa10.57□□□□□ -0.72
SMIM12-204ENST00000446026 DDR1Q08345 913 aa10.57□□□□□ -0.72
SMIM12-204ENST00000446026 USP25Q9UHP3 1055 aa10.57□□□□□ -0.72
SMIM12-204ENST00000446026 RIOK3O14730 519 aaKnown RBP10.57□□□□□ -0.72
SMIM12-204ENST00000446026 FIBPO43427 364 aa10.57□□□□□ -0.72
SMIM12-204ENST00000446026 AK2P54819 239 aa10.57□□□□□ -0.72
SMIM12-204ENST00000446026 RHPN1Q8TCX5 695 aa10.57□□□□□ -0.72
SMIM12-204ENST00000446026 CHPF2Q9P2E5 772 aa10.57□□□□□ -0.72
SMIM12-204ENST00000446026 SNX14Q9Y5W7 946 aa10.57□□□□□ -0.72
SMIM12-204ENST00000446026 PI4KAP2A4QPH2 592 aa10.56□□□□□ -0.72
SMIM12-204ENST00000446026 SLFN14P0C7P3 912 aa10.56□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 15.1 ms