RNA–Protein interactions for RNA: ENST00000445497.1

UBBP3-201, Transcript of ubiquitin B pseudogene 3, humanhuman

BASIC

Gene UBBP3, Length 241 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBBP3-201ENST00000445497 PRR7Q8TB68 274 aa3.3□□□□□ -1.88
UBBP3-201ENST00000445497 RNF217Q8TC41 542 aa3.3□□□□□ -1.88
UBBP3-201ENST00000445497 PI4K2BQ8TCG2 481 aa3.3□□□□□ -1.88
UBBP3-201ENST00000445497 ZFPM2Q8WW38 1151 aa3.3□□□□□ -1.88
UBBP3-201ENST00000445497 GIMAP1Q8WWP7 306 aa3.3□□□□□ -1.88
UBBP3-201ENST00000445497 N4BP2L2Q92802 583 aaPredicted RBP3.3□□□□□ -1.88
UBBP3-201ENST00000445497 CENPTQ96BT3 561 aa3.3□□□□□ -1.88
UBBP3-201ENST00000445497 TBC1D31Q96DN5 1066 aa3.3□□□□□ -1.88
UBBP3-201ENST00000445497 GJD4Q96KN9 370 aaPredicted RBP3.3□□□□□ -1.88
UBBP3-201ENST00000445497 UIMC1Q96RL1 719 aa3.3□□□□□ -1.88
UBBP3-201ENST00000445497 RBCK1Q9BYM8 510 aa3.3□□□□□ -1.88
UBBP3-201ENST00000445497 TRIM6Q9C030 488 aaPredicted RBP3.3□□□□□ -1.88
UBBP3-201ENST00000445497 TSPYL1Q9H0U9 437 aa3.3□□□□□ -1.88
UBBP3-201ENST00000445497 CD248Q9HCU0 757 aa3.3□□□□□ -1.88
UBBP3-201ENST00000445497 CABP2Q9NPB3 220 aa3.3□□□□□ -1.88
UBBP3-201ENST00000445497 KMT5AQ9NQR1 393 aa3.3□□□□□ -1.88
UBBP3-201ENST00000445497 RASSF1Q9NS23 344 aa3.3□□□□□ -1.88
UBBP3-201ENST00000445497 CHCHD3Q9NX63 227 aaKnown RBP3.3□□□□□ -1.88
UBBP3-201ENST00000445497 LUZP4Q9P127 313 aa3.3□□□□□ -1.88
UBBP3-201ENST00000445497 USP25Q9UHP3 1055 aa3.3□□□□□ -1.88
UBBP3-201ENST00000445497 TAGLN3Q9UI15 199 aa3.3□□□□□ -1.88
UBBP3-201ENST00000445497 PLAAQ9Y263 795 aa3.3□□□□□ -1.88
UBBP3-201ENST00000445497 ATP8A1Q9Y2Q0 1164 aa3.3□□□□□ -1.88
UBBP3-201ENST00000445497 LUC7L2Q9Y383 392 aaKnown RBP3.3□□□□□ -1.88
UBBP3-201ENST00000445497 CEP83Q9Y592 693 aa3.3□□□□□ -1.88
UBBP3-201ENST00000445497 RAD54L2Q9Y4B4 1467 aa3.29□□□□□ -1.88
UBBP3-201ENST00000445497 SMTNL1A8MU46 457 aa3.29□□□□□ -1.88
UBBP3-201ENST00000445497 PPP1R3GB7ZBB8 358 aa3.29□□□□□ -1.88
UBBP3-201ENST00000445497 SPTLC1O15269 473 aa3.29□□□□□ -1.88
UBBP3-201ENST00000445497 RASGRP1O95267 797 aa3.29□□□□□ -1.88
UBBP3-201ENST00000445497 SCGB1D2O95969 90 aa3.29□□□□□ -1.88
UBBP3-201ENST00000445497 SSBP05455 408 aaKnown RBP eCLIP3.29□□□□□ -1.88
UBBP3-201ENST00000445497 LDHBP07195 334 aaKnown RBP3.29□□□□□ -1.88
UBBP3-201ENST00000445497 U2AF1L5P0DN76 240 aaPredicted RBP3.29□□□□□ -1.88
UBBP3-201ENST00000445497 OSBPP22059 807 aa3.29□□□□□ -1.88
UBBP3-201ENST00000445497 HOXC13P31276 330 aa3.29□□□□□ -1.88
UBBP3-201ENST00000445497 ABCD1P33897 745 aa3.29□□□□□ -1.88
UBBP3-201ENST00000445497 GJA8P48165 433 aa3.29□□□□□ -1.88
UBBP3-201ENST00000445497 SARSP49591 514 aaKnown RBP3.29□□□□□ -1.88
UBBP3-201ENST00000445497 SNX16P57768 344 aa3.29□□□□□ -1.88
UBBP3-201ENST00000445497 KRT83P78385 493 aa3.29□□□□□ -1.88
UBBP3-201ENST00000445497 U2AF1Q01081 240 aaKnown RBP eCLIP3.29□□□□□ -1.88
UBBP3-201ENST00000445497 FMR1Q06787 632 aaKnown RBP eCLIP3.29□□□□□ -1.88
UBBP3-201ENST00000445497 GOLGA2Q08379 1002 aa3.29□□□□□ -1.88
UBBP3-201ENST00000445497 COX10Q12887 443 aa3.29□□□□□ -1.88
UBBP3-201ENST00000445497 EIF2B5Q13144 721 aaKnown RBP3.29□□□□□ -1.88
UBBP3-201ENST00000445497 TBX2Q13207 712 aaPredicted RBP3.29□□□□□ -1.88
UBBP3-201ENST00000445497 SLC9A5Q14940 896 aa3.29□□□□□ -1.88
UBBP3-201ENST00000445497 GFOD2Q3B7J2 385 aa3.29□□□□□ -1.88
UBBP3-201ENST00000445497 RGL3Q3MIN7 710 aa3.29□□□□□ -1.88
UBBP3-201ENST00000445497 FILIP1LQ4L180 1135 aa3.29□□□□□ -1.88
UBBP3-201ENST00000445497 DACT2Q5SW24 774 aa3.29□□□□□ -1.88
UBBP3-201ENST00000445497 FAM83BQ5T0W9 1011 aa3.29□□□□□ -1.88
UBBP3-201ENST00000445497 JAKMIP3Q5VZ66 844 aa3.29□□□□□ -1.88
UBBP3-201ENST00000445497 CHADLQ6NUI6 762 aa3.29□□□□□ -1.88
UBBP3-201ENST00000445497 ERAP2Q6P179 960 aa3.29□□□□□ -1.88
UBBP3-201ENST00000445497 CFAP161Q6P656 301 aa3.29□□□□□ -1.88
UBBP3-201ENST00000445497 SKAP1Q86WV1 359 aa3.29□□□□□ -1.88
UBBP3-201ENST00000445497 TRPM4Q8TD43 1214 aa3.29□□□□□ -1.88
UBBP3-201ENST00000445497 SMCR8Q8TEV9 937 aaPredicted RBP3.29□□□□□ -1.88
UBBP3-201ENST00000445497 SH3TC2Q8TF17 1288 aa3.29□□□□□ -1.88
UBBP3-201ENST00000445497 JARID2Q92833 1246 aaPredicted RBP3.29□□□□□ -1.88
UBBP3-201ENST00000445497 VMP1Q96GC9 406 aa3.29□□□□□ -1.88
UBBP3-201ENST00000445497 TMEM87BQ96K49 555 aa3.29□□□□□ -1.88
UBBP3-201ENST00000445497 DEPDC7Q96QD5 511 aa3.29□□□□□ -1.88
UBBP3-201ENST00000445497 CAMKK2Q96RR4 588 aa3.29□□□□□ -1.88
UBBP3-201ENST00000445497 NUDT12Q9BQG2 462 aa3.29□□□□□ -1.88
UBBP3-201ENST00000445497 FAM167BQ9BTA0 163 aa3.29□□□□□ -1.88
UBBP3-201ENST00000445497 CCDC113Q9H0I3 377 aa3.29□□□□□ -1.88
UBBP3-201ENST00000445497 NUCKS1Q9H1E3 243 aaKnown RBP3.29□□□□□ -1.88
UBBP3-201ENST00000445497 CYP4F11Q9HBI6 524 aa3.29□□□□□ -1.88
UBBP3-201ENST00000445497 PTPRHQ9HD43 1115 aa3.29□□□□□ -1.88
UBBP3-201ENST00000445497 CHST12Q9NRB3 414 aa3.29□□□□□ -1.88
UBBP3-201ENST00000445497 DIAPH3Q9NSV4 1193 aa3.29□□□□□ -1.88
UBBP3-201ENST00000445497 STIM2Q9P246 746 aa3.29□□□□□ -1.88
UBBP3-201ENST00000445497 FRMD4AQ9P2Q2 1039 aaPredicted RBP3.29□□□□□ -1.88
UBBP3-201ENST00000445497 LIMD1Q9UGP4 676 aa3.29□□□□□ -1.88
UBBP3-201ENST00000445497 IP6K2Q9UHH9 426 aa3.29□□□□□ -1.88
UBBP3-201ENST00000445497 PNMA8BQ9ULN7 279 aaPredicted RBP3.29□□□□□ -1.88
UBBP3-201ENST00000445497 NOD1Q9Y239 953 aa3.29□□□□□ -1.88
UBBP3-201ENST00000445497 RBM19Q9Y4C8 960 aaKnown RBP3.29□□□□□ -1.88
UBBP3-201ENST00000445497 USP17L3A6NCW0 530 aa3.28□□□□□ -1.88
UBBP3-201ENST00000445497 USP17L4A6NCW7 530 aa3.28□□□□□ -1.88
UBBP3-201ENST00000445497 ATP5J2-PTCD1G3V325 749 aa3.28□□□□□ -1.88
UBBP3-201ENST00000445497 FOXN3O00409 490 aaPredicted RBP3.28□□□□□ -1.88
UBBP3-201ENST00000445497 CCP110O43303 1012 aa3.28□□□□□ -1.88
UBBP3-201ENST00000445497 NDUFB5O43674 189 aa3.28□□□□□ -1.88
UBBP3-201ENST00000445497 ZNF853P0CG23 659 aa3.28□□□□□ -1.88
UBBP3-201ENST00000445497 SRGNP10124 158 aa3.28□□□□□ -1.88
UBBP3-201ENST00000445497 ATF7P17544 494 aaPredicted RBP3.28□□□□□ -1.88
UBBP3-201ENST00000445497 ATF4P18848 351 aaPredicted RBP3.28□□□□□ -1.88
UBBP3-201ENST00000445497 RASA1P20936 1047 aa3.28□□□□□ -1.88
UBBP3-201ENST00000445497 CTNNA1P35221 906 aaKnown RBP3.28□□□□□ -1.88
UBBP3-201ENST00000445497 BCAMP50895 628 aa3.28□□□□□ -1.88
UBBP3-201ENST00000445497 GPSM2P81274 684 aa3.28□□□□□ -1.88
UBBP3-201ENST00000445497 PLIN5Q00G26 463 aa3.28□□□□□ -1.88
UBBP3-201ENST00000445497 FKBP4Q02790 459 aaKnown RBP eCLIP3.28□□□□□ -1.88
UBBP3-201ENST00000445497 FAM69CQ0P6D2 419 aa3.28□□□□□ -1.88
UBBP3-201ENST00000445497 NFX1Q12986 1120 aaKnown RBP3.28□□□□□ -1.88
UBBP3-201ENST00000445497 ZNF211Q13398 564 aaPredicted RBP3.28□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 410 ms