RNA–Protein interactions for RNA: ENST00000444997.1

PDCD4-203, Transcript of programmed cell death 4, humanhuman

TSL 3

Gene PDCD4, Length 819 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDCD4-203ENST00000444997 GREM2Q9H772 168 aa22.13■■□□□ 1.13
PDCD4-203ENST00000444997 XDHP47989 1333 aa22.12■■□□□ 1.13
PDCD4-203ENST00000444997 DOK7Q18PE1 504 aa22.12■■□□□ 1.13
PDCD4-203ENST00000444997 PLA2G12BQ9BX93 195 aa22.12■■□□□ 1.13
PDCD4-203ENST00000444997 RTL9Q8NET4 1388 aa22.12■■□□□ 1.13
PDCD4-203ENST00000444997 TMEM88BA6NKF7 163 aa22.11■■□□□ 1.13
PDCD4-203ENST00000444997 F6X3S4 739 aa22.11■■□□□ 1.13
PDCD4-203ENST00000444997 CCER2I3L3R5 266 aa22.11■■□□□ 1.13
PDCD4-203ENST00000444997 ECE2O60344 883 aa22.11■■□□□ 1.13
PDCD4-203ENST00000444997 ATP2B4P23634 1241 aa22.11■■□□□ 1.13
PDCD4-203ENST00000444997 IGHMBP2P38935 993 aaKnown RBP22.11■■□□□ 1.13
PDCD4-203ENST00000444997 BSDC1Q9NW68 430 aaPredicted RBP22.11■■□□□ 1.13
PDCD4-203ENST00000444997 COL4A1P02462 1669 aa22.11■■□□□ 1.13
PDCD4-203ENST00000444997 H7C1D1 291 aa22.1■■□□□ 1.13
PDCD4-203ENST00000444997 GPR101Q96P66 508 aaPredicted RBP22.1■■□□□ 1.13
PDCD4-203ENST00000444997 PSMD14O00487 310 aa22.09■■□□□ 1.13
PDCD4-203ENST00000444997 BEND3Q5T5X7 828 aa22.09■■□□□ 1.13
PDCD4-203ENST00000444997 CNOT7Q9UIV1 285 aaKnown RBP22.09■■□□□ 1.13
PDCD4-203ENST00000444997 CACNA1FO60840 1977 aa22.08■■□□□ 1.13
PDCD4-203ENST00000444997 ADAMTSL1Q8N6G6 1762 aa22.08■■□□□ 1.13
PDCD4-203ENST00000444997 ITGA6P23229 1130 aa22.08■■□□□ 1.13
PDCD4-203ENST00000444997 CASP7P55210 303 aa22.08■■□□□ 1.13
PDCD4-203ENST00000444997 DPF2Q92785 391 aa22.08■■□□□ 1.13
PDCD4-203ENST00000444997 MPHOSPH8Q99549 860 aa22.08■■□□□ 1.13
PDCD4-203ENST00000444997 MINPP1Q9UNW1 487 aa22.08■■□□□ 1.13
PDCD4-203ENST00000444997 LTBP1Q14766 1721 aa22.07■■□□□ 1.12
PDCD4-203ENST00000444997 CSF1RP07333 972 aa22.07■■□□□ 1.12
PDCD4-203ENST00000444997 RPS12P25398 132 aaKnown RBP22.07■■□□□ 1.12
PDCD4-203ENST00000444997 SLC4A10Q6U841 1118 aa22.07■■□□□ 1.12
PDCD4-203ENST00000444997 MKRN1Q9UHC7 482 aaKnown RBP22.07■■□□□ 1.12
PDCD4-203ENST00000444997 ZBTB12Q9Y330 459 aaPredicted RBP22.07■■□□□ 1.12
PDCD4-203ENST00000444997 SLFN5Q08AF3 891 aa22.06■■□□□ 1.12
PDCD4-203ENST00000444997 MICALL2Q8IY33 904 aa22.06■■□□□ 1.12
PDCD4-203ENST00000444997 C9orf78Q9NZ63 289 aaPredicted RBP22.06■■□□□ 1.12
PDCD4-203ENST00000444997 ANKRD18BA2A2Z9 1011 aa22.05■■□□□ 1.12
PDCD4-203ENST00000444997 ALDH1L1O75891 902 aa22.05■■□□□ 1.12
PDCD4-203ENST00000444997 FAM161AQ3B820 660 aa22.05■■□□□ 1.12
PDCD4-203ENST00000444997 ZC3H15Q8WU90 426 aaKnown RBP22.05■■□□□ 1.12
PDCD4-203ENST00000444997 SRCIN1Q9C0H9 1055 aa22.05■■□□□ 1.12
PDCD4-203ENST00000444997 ANKRD2Q9GZV1 360 aa22.05■■□□□ 1.12
PDCD4-203ENST00000444997 GRM8O00222 908 aa22.04■■□□□ 1.12
PDCD4-203ENST00000444997 KCNQ5Q9NR82 932 aa22.04■■□□□ 1.12
PDCD4-203ENST00000444997 CHMP3Q9Y3E7 222 aa22.04■■□□□ 1.12
PDCD4-203ENST00000444997 VIL1P09327 827 aaKnown RBP22.03■■□□□ 1.12
PDCD4-203ENST00000444997 CCT4P50991 539 aaKnown RBP22.03■■□□□ 1.12
PDCD4-203ENST00000444997 IFIT5Q13325 482 aaKnown RBP22.03■■□□□ 1.12
PDCD4-203ENST00000444997 PODNQ7Z5L7 613 aa22.03■■□□□ 1.12
PDCD4-203ENST00000444997 ABT1Q9ULW3 272 aaKnown RBP22.03■■□□□ 1.12
PDCD4-203ENST00000444997 LEMD3Q9Y2U8 911 aa22.03■■□□□ 1.12
PDCD4-203ENST00000444997 CNTNAP1P78357 1384 aa22.02■■□□□ 1.12
PDCD4-203ENST00000444997 MRPL50Q8N5N7 158 aaKnown RBP22.02■■□□□ 1.12
PDCD4-203ENST00000444997 PGAP2Q9UHJ9 254 aa22.02■■□□□ 1.12
PDCD4-203ENST00000444997 KCNJ4P48050 445 aa22.01■■□□□ 1.11
PDCD4-203ENST00000444997 HIRAP54198 1017 aaPredicted RBP22.01■■□□□ 1.11
PDCD4-203ENST00000444997 FOXO4P98177 505 aa22.01■■□□□ 1.11
PDCD4-203ENST00000444997 TRPM4Q8TD43 1214 aa22.01■■□□□ 1.11
PDCD4-203ENST00000444997 MYH3P11055 1940 aa22.01■■□□□ 1.11
PDCD4-203ENST00000444997 PTPRCP08575 1304 aa22.01■■□□□ 1.11
PDCD4-203ENST00000444997 MED23Q9ULK4 1368 aa22■■□□□ 1.11
PDCD4-203ENST00000444997 SHTN1A0MZ66 631 aa22■■□□□ 1.11
PDCD4-203ENST00000444997 TRAF5O00463 557 aa22■■□□□ 1.11
PDCD4-203ENST00000444997 CCDC57Q2TAC2 916 aa22■■□□□ 1.11
PDCD4-203ENST00000444997 DEFB115Q30KQ5 88 aa22■■□□□ 1.11
PDCD4-203ENST00000444997 TAF7LQ5H9L4 462 aa22■■□□□ 1.11
PDCD4-203ENST00000444997 LMBR1LQ6UX01 489 aa22■■□□□ 1.11
PDCD4-203ENST00000444997 CDC37L1Q7L3B6 337 aa22■■□□□ 1.11
PDCD4-203ENST00000444997 SAMD7Q7Z3H4 446 aa22■■□□□ 1.11
PDCD4-203ENST00000444997 USP17L3A6NCW0 530 aa21.99■■□□□ 1.11
PDCD4-203ENST00000444997 USP17L4A6NCW7 530 aa21.99■■□□□ 1.11
PDCD4-203ENST00000444997 TBC1D10BQ4KMP7 808 aaPredicted RBP21.99■■□□□ 1.11
PDCD4-203ENST00000444997 RBM26Q5T8P6 1007 aaKnown RBP21.99■■□□□ 1.11
PDCD4-203ENST00000444997 RSBN1LQ6PCB5 846 aaPredicted RBP21.99■■□□□ 1.11
PDCD4-203ENST00000444997 USP17L1Q7RTZ2 530 aa21.99■■□□□ 1.11
PDCD4-203ENST00000444997 AGBL3Q8NEM8 1001 aa21.99■■□□□ 1.11
PDCD4-203ENST00000444997 SSH1Q8WYL5 1049 aa21.99■■□□□ 1.11
PDCD4-203ENST00000444997 CDCA7LQ96GN5 454 aa21.99■■□□□ 1.11
PDCD4-203ENST00000444997 ZNF804BA4D1E1 1349 aa21.99■■□□□ 1.11
PDCD4-203ENST00000444997 GLIS2Q9BZE0 524 aaPredicted RBP21.98■■□□□ 1.11
PDCD4-203ENST00000444997 COA1Q9GZY4 146 aa21.98■■□□□ 1.11
PDCD4-203ENST00000444997 WTIPA6NIX2 430 aaPredicted RBP21.97■■□□□ 1.11
PDCD4-203ENST00000444997 RASSF10A6NK89 507 aa21.97■■□□□ 1.11
PDCD4-203ENST00000444997 HSPA1AP0DMV8 641 aaKnown RBP21.97■■□□□ 1.11
PDCD4-203ENST00000444997 HSPA1BP0DMV9 641 aaKnown RBP21.97■■□□□ 1.11
PDCD4-203ENST00000444997 VEGFBP49765 207 aa21.97■■□□□ 1.11
PDCD4-203ENST00000444997 FMR1Q06787 632 aaKnown RBP eCLIP21.97■■□□□ 1.11
PDCD4-203ENST00000444997 CHRNDQ07001 517 aa21.97■■□□□ 1.11
PDCD4-203ENST00000444997 ALDH1L2Q3SY69 923 aa21.97■■□□□ 1.11
PDCD4-203ENST00000444997 KIF4BQ2VIQ3 1234 aa21.96■■□□□ 1.11
PDCD4-203ENST00000444997 DCPSQ96C86 337 aaKnown RBP21.96■■□□□ 1.11
PDCD4-203ENST00000444997 CELF2O95319 508 aaKnown RBP21.95■■□□□ 1.1
PDCD4-203ENST00000444997 CT47B1P0C2W7 299 aaPredicted RBP21.95■■□□□ 1.1
PDCD4-203ENST00000444997 EPHA10Q5JZY3 1008 aa21.95■■□□□ 1.1
PDCD4-203ENST00000444997 CST9Q5W186 159 aa21.95■■□□□ 1.1
PDCD4-203ENST00000444997 PAXIP1Q6ZW49 1069 aaPredicted RBP21.95■■□□□ 1.1
PDCD4-203ENST00000444997 TRMT2AQ8IZ69 625 aaKnown RBP21.95■■□□□ 1.1
PDCD4-203ENST00000444997 FBXW7Q969H0 707 aa21.95■■□□□ 1.1
PDCD4-203ENST00000444997 SMC4Q9NTJ3 1288 aa21.95■■□□□ 1.1
PDCD4-203ENST00000444997 USP17L8P0C7I0 530 aa21.94■■□□□ 1.1
PDCD4-203ENST00000444997 LDHAL6AQ6ZMR3 332 aa21.94■■□□□ 1.1
PDCD4-203ENST00000444997 USP48Q86UV5 1035 aa21.94■■□□□ 1.1
Retrieved 100 of 20,778 RNA–protein pairs in 90.7 ms