RNA–Protein interactions for RNA: ENST00000443816.5

FN1-211, Transcript of fibronectin 1, humanhuman

TSL 1 (best) BASIC

Gene FN1, Length 7,762 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FN1-211ENST00000443816 SLC39A6Q13433 755 aa12.87□□□□□ -0.35
FN1-211ENST00000443816 CAMK4Q16566 473 aa12.87□□□□□ -0.35
FN1-211ENST00000443816 TRMT1LQ7Z2T5 733 aaKnown RBP12.87□□□□□ -0.35
FN1-211ENST00000443816 RRP36Q96EU6 259 aaKnown RBP12.87□□□□□ -0.35
FN1-211ENST00000443816 SSX2IPQ9Y2D8 614 aa12.87□□□□□ -0.35
FN1-211ENST00000443816 GJA3Q9Y6H8 435 aa12.87□□□□□ -0.35
FN1-211ENST00000443816 USP8P40818 1118 aa12.87□□□□□ -0.35
FN1-211ENST00000443816 COMMD10Q9Y6G5 202 aa12.87□□□□□ -0.35
FN1-211ENST00000443816 GSTTP1A0A1W2PQM5 241 aa12.86□□□□□ -0.35
FN1-211ENST00000443816 IRS4O14654 1257 aaPredicted RBP12.86□□□□□ -0.35
FN1-211ENST00000443816 PRC1O43663 620 aa12.86□□□□□ -0.35
FN1-211ENST00000443816 SFPQP23246 707 aaKnown RBP eCLIP12.86□□□□□ -0.35
FN1-211ENST00000443816 CALML3P27482 149 aa12.86□□□□□ -0.35
FN1-211ENST00000443816 TMOD4Q9NZQ9 345 aa12.86□□□□□ -0.35
FN1-211ENST00000443816 CCNL1Q9UK58 526 aaPredicted RBP12.86□□□□□ -0.35
FN1-211ENST00000443816 YEATS4O95619 227 aa12.86□□□□□ -0.35
FN1-211ENST00000443816 CASQ1P31415 396 aa12.86□□□□□ -0.35
FN1-211ENST00000443816 IFI16Q16666 785 aaKnown RBP12.86□□□□□ -0.35
FN1-211ENST00000443816 TDRD12Q587J7 1177 aaKnown RBP12.86□□□□□ -0.35
FN1-211ENST00000443816 GRIPAP1Q4V328 841 aa12.86□□□□□ -0.35
FN1-211ENST00000443816 FILIP1Q7Z7B0 1213 aa12.86□□□□□ -0.35
FN1-211ENST00000443816 SUPT20HQ8NEM7 779 aa12.86□□□□□ -0.35
FN1-211ENST00000443816 ARHGAP45Q92619 1136 aa12.86□□□□□ -0.35
FN1-211ENST00000443816 PUS7Q96PZ0 661 aaKnown RBP12.86□□□□□ -0.35
FN1-211ENST00000443816 IP6K1Q92551 441 aa12.86□□□□□ -0.35
FN1-211ENST00000443816 ORC3Q9UBD5 711 aaPredicted RBP12.86□□□□□ -0.35
FN1-211ENST00000443816 PHACTR2O75167 634 aa12.86□□□□□ -0.35
FN1-211ENST00000443816 STAMBPO95630 424 aa12.86□□□□□ -0.35
FN1-211ENST00000443816 IDEP14735 1019 aa12.86□□□□□ -0.35
FN1-211ENST00000443816 STAT6P42226 847 aa12.86□□□□□ -0.35
FN1-211ENST00000443816 RBM25P49756 843 aaKnown RBP12.86□□□□□ -0.35
FN1-211ENST00000443816 PLVAPQ9BX97 442 aa12.85□□□□□ -0.35
FN1-211ENST00000443816 IMPG2Q9BZV3 1241 aa12.85□□□□□ -0.35
FN1-211ENST00000443816 MAST3O60307 1309 aa12.85□□□□□ -0.35
FN1-211ENST00000443816 NAPAP54920 295 aa12.85□□□□□ -0.35
FN1-211ENST00000443816 FERMT3Q86UX7 667 aa12.85□□□□□ -0.35
FN1-211ENST00000443816 GBP3Q9H0R5 595 aa12.85□□□□□ -0.35
FN1-211ENST00000443816 PRAG1Q86YV5 1406 aa12.85□□□□□ -0.35
FN1-211ENST00000443816 RIMBP2O15034 1052 aa12.85□□□□□ -0.35
FN1-211ENST00000443816 BRDTQ58F21 947 aaPredicted RBP12.85□□□□□ -0.35
FN1-211ENST00000443816 FSIP1Q8NA03 581 aa12.85□□□□□ -0.35
FN1-211ENST00000443816 EIF4A2Q14240 407 aaKnown RBP12.85□□□□□ -0.35
FN1-211ENST00000443816 PARP10Q53GL7 1025 aa12.85□□□□□ -0.35
FN1-211ENST00000443816 ALS2CR12Q96Q35 445 aa12.85□□□□□ -0.35
FN1-211ENST00000443816 PAG1Q9NWQ8 432 aa12.85□□□□□ -0.35
FN1-211ENST00000443816 USP21Q9UK80 565 aa12.85□□□□□ -0.35
FN1-211ENST00000443816 GCOM1H8Y6P7 765 aaPredicted RBP12.84□□□□□ -0.35
FN1-211ENST00000443816 MYZAPP0CAP1 466 aa12.84□□□□□ -0.35
FN1-211ENST00000443816 PAFAH1B1P43034 410 aa12.84□□□□□ -0.35
FN1-211ENST00000443816 MAGEB6Q8N7X4 407 aa12.84□□□□□ -0.35
FN1-211ENST00000443816 JARID2Q92833 1246 aaPredicted RBP12.84□□□□□ -0.35
FN1-211ENST00000443816 KRT13P13646 458 aa12.84□□□□□ -0.35
FN1-211ENST00000443816 LUZP1Q86V48 1076 aa12.84□□□□□ -0.35
FN1-211ENST00000443816 ARHGEF10LQ9HCE6 1279 aa12.84□□□□□ -0.35
FN1-211ENST00000443816 TRAPPC8Q9Y2L5 1435 aa12.84□□□□□ -0.35
FN1-211ENST00000443816 CCDC87Q9NVE4 849 aa12.84□□□□□ -0.35
FN1-211ENST00000443816 MACROD2A1Z1Q3 448 aa12.84□□□□□ -0.35
FN1-211ENST00000443816 SLC9C2Q5TAH2 1124 aa12.84□□□□□ -0.35
FN1-211ENST00000443816 DYDC1Q8WWB3 177 aa12.84□□□□□ -0.35
FN1-211ENST00000443816 DENND2AQ9ULE3 1009 aa12.84□□□□□ -0.35
FN1-211ENST00000443816 TBX22Q9Y458 520 aa12.84□□□□□ -0.35
FN1-211ENST00000443816 LMBR1LQ6UX01 489 aa12.84□□□□□ -0.35
FN1-211ENST00000443816 ACTN2P35609 894 aa12.83□□□□□ -0.35
FN1-211ENST00000443816 PDE6BP35913 854 aa12.83□□□□□ -0.35
FN1-211ENST00000443816 NAA15Q9BXJ9 866 aaKnown RBP12.83□□□□□ -0.35
FN1-211ENST00000443816 MCM9Q9NXL9 1143 aa12.83□□□□□ -0.35
FN1-211ENST00000443816 LMAN1P49257 510 aa12.83□□□□□ -0.36
FN1-211ENST00000443816 STX1AQ16623 288 aa12.83□□□□□ -0.36
FN1-211ENST00000443816 RHPN1Q8TCX5 695 aa12.83□□□□□ -0.36
FN1-211ENST00000443816 DDX19AQ9NUU7 478 aaKnown RBP12.83□□□□□ -0.36
FN1-211ENST00000443816 GJB2P29033 226 aa12.83□□□□□ -0.36
FN1-211ENST00000443816 DDX12PQ92771 950 aa12.83□□□□□ -0.36
FN1-211ENST00000443816 GNA11P29992 359 aa12.83□□□□□ -0.36
FN1-211ENST00000443816 GOPCQ9HD26 462 aa12.83□□□□□ -0.36
FN1-211ENST00000443816 ALDH1B1P30837 517 aa12.83□□□□□ -0.36
FN1-211ENST00000443816 FAM193AP78312 1265 aa12.83□□□□□ -0.36
FN1-211ENST00000443816 BAG6P46379 1132 aa12.82□□□□□ -0.36
FN1-211ENST00000443816 IQSEC3Q9UPP2 1182 aaPredicted RBP12.82□□□□□ -0.36
FN1-211ENST00000443816 GRPEL1Q9HAV7 217 aa12.82□□□□□ -0.36
FN1-211ENST00000443816 CCDC102BQ68D86 513 aa12.82□□□□□ -0.36
FN1-211ENST00000443816 TSNARE1Q96NA8 513 aa12.82□□□□□ -0.36
FN1-211ENST00000443816 ANXA1P04083 346 aa12.82□□□□□ -0.36
FN1-211ENST00000443816 TAF12Q16514 161 aa12.82□□□□□ -0.36
FN1-211ENST00000443816 BMP2KLQ5H9B9 411 aa12.82□□□□□ -0.36
FN1-211ENST00000443816 CRACR2AQ9BSW2 395 aa12.82□□□□□ -0.36
FN1-211ENST00000443816 CEP170Q5SW79 1584 aa12.81□□□□□ -0.36
FN1-211ENST00000443816 TTC22Q5TAA0 569 aa12.81□□□□□ -0.36
FN1-211ENST00000443816 TTC6Q86TZ1 520 aa12.81□□□□□ -0.36
FN1-211ENST00000443816 RBM28Q9NW13 759 aaKnown RBP12.81□□□□□ -0.36
FN1-211ENST00000443816 LINS1Q8NG48 757 aa12.81□□□□□ -0.36
FN1-211ENST00000443816 COL17A1Q9UMD9 1497 aaPredicted RBP12.81□□□□□ -0.36
FN1-211ENST00000443816 CCDC66A2RUB6 948 aa12.81□□□□□ -0.36
FN1-211ENST00000443816 RNMTO43148 476 aaKnown RBP12.81□□□□□ -0.36
FN1-211ENST00000443816 ZNF354CQ86Y25 554 aa12.81□□□□□ -0.36
FN1-211ENST00000443816 ALG1Q9BT22 464 aa12.81□□□□□ -0.36
FN1-211ENST00000443816 EDC4Q6P2E9 1401 aaKnown RBP12.81□□□□□ -0.36
FN1-211ENST00000443816 KLF18A0A0U1RQI7 1052 aa12.81□□□□□ -0.36
FN1-211ENST00000443816 SYCE3A1L190 88 aa12.81□□□□□ -0.36
FN1-211ENST00000443816 KCNA6P17658 529 aa12.81□□□□□ -0.36
FN1-211ENST00000443816 NOP2P46087 812 aaKnown RBP12.81□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 98.7 ms